Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_H22
(497 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 33 0.17
07_03_0179 + 14801037-14801108,14801325-14802788 31 0.39
05_07_0216 + 28461783-28461788,28461837-28462295,28463198-284633... 31 0.51
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 30 1.2
04_03_0147 - 11853940-11854128,11854933-11855013,11855501-118555... 30 1.2
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 29 2.1
11_06_0316 + 22323814-22324692 29 2.7
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 29 2.7
05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744... 29 2.7
02_02_0629 + 12386214-12386533,12386666-12386749,12386834-123869... 29 2.7
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 28 3.6
04_04_0871 + 28898262-28898534,28899552-28900015,28900242-289003... 28 3.6
10_08_0842 - 20954712-20957738 28 4.8
11_04_0097 + 13448740-13450725 27 6.3
05_01_0542 + 4729099-4729419,4730837-4731086,4731387-4731751 27 6.3
03_03_0254 + 15884149-15884295,15884765-15884803,15884958-158851... 27 6.3
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 27 8.4
02_01_0170 - 1174224-1174321,1174429-1174588,1174673-1174823,117... 27 8.4
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 27 8.4
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 32.7 bits (71), Expect = 0.17
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Frame = +3
Query: 138 TVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK-------ALEE 296
TVG + + ++ +S ++ KL +E +E++I++ + ++EKE + LE+ AL+E
Sbjct: 498 TVGTVLPS--EDSVSDRKRKLEFLEMQEELIKEEEKRQEKEDKAKLEVPKATEEDVALKE 555
Query: 297 MASGTAKK*KD 329
M TA++ K+
Sbjct: 556 MTEPTAREEKE 566
>07_03_0179 + 14801037-14801108,14801325-14802788
Length = 511
Score = 31.5 bits (68), Expect = 0.39
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 69 SDLPYGAPVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKE-AKLREIEAKEKVIRDAKL 245
+DLP AP+ + PL R++FL V ++LSK+E A+L + K + + L
Sbjct: 389 TDLPSRAPIELKPLPSGLRYAFLNGDVESPVIISDKLSKEETARLIAVLEKHRAVFGYSL 448
Query: 246 KEEK 257
++ K
Sbjct: 449 QDLK 452
>05_07_0216 +
28461783-28461788,28461837-28462295,28463198-28463315,
28463350-28463609,28465220-28465525
Length = 382
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 119 WTLVLPHRRSSIRRLPPEQAIKERSETTRD*SQREGHPRCQAEGGERKSL 268
WT +L ++++RRL + +R T + SQ+ H + E K L
Sbjct: 139 WTFLLREIKAAVRRLQELRGEPKRRHTNQQLSQKRNHQKWNTNADEEKKL 188
>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 168 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVI 341
+ R KEA R E KE RD K ++E+E A E K LEE ++ KD++ +
Sbjct: 1110 REREKDKEASRRLEETKE---RDKKFEKEREIAEERERKKLEEQERERERE-KDRLAV 1163
>04_03_0147 -
11853940-11854128,11854933-11855013,11855501-11855584,
11855663-11855735,11855888-11855949,11856246-11856327,
11857643-11858262
Length = 396
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -2
Query: 220 SLASISRSFASFFDSLFWWKAPYRTPTVRKDQRP--NLIRGDIRTGAPYGKSDILLYNCY 47
S I S+ + DS+ P R P VR+ +P NL + G K+D L +C
Sbjct: 276 SRRQILESYQVYGDSIMGQYGPSR-PNVRQLVKPLLNLFHSEPGNGLWKRKADSTLRHCK 334
Query: 46 TVKQFLYDT 20
T++ FL +T
Sbjct: 335 TLESFLEET 343
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +3
Query: 168 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKA 287
+ R+ +++A+ REI K++ R+ ++EE+ER +E +A
Sbjct: 484 RQRVLEEQARAREIVRKQEEERERLIREEEERQRLVEEEA 523
>11_06_0316 + 22323814-22324692
Length = 292
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 77 TIRSSCAYIASNQVWTLVLPHRRSSIRRLPPEQAIKERSETTRD*SQRE 223
TI S ++S ++ H R+ I R P+Q ++RSE +RD + RE
Sbjct: 210 TISSGSCELSSPDCLEQLVVHERT-ITRWIPQQCREQRSEASRDEANRE 257
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 183 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVI 341
KKE K ++ +AKE + EE+ER+S + +K K+K+V+
Sbjct: 28 KKEKKEKKRKAKEPSPSSSSSSEEEERSSTSSDEPAPAAKKAKKEKTKEKVVV 80
>05_04_0209 -
19073147-19074041,19074117-19074163,19074258-19074437,
19074839-19074955,19075105-19075227,19075391-19075776,
19076177-19076303,19077140-19077202,19078035-19078086,
19078189-19080023
Length = 1274
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 171 NRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 278
+ + KK + + A +++ D KLKEEK + + LE
Sbjct: 816 DEIDKKVTLMSNVTAINQMLEDIKLKEEKTKQAVLE 851
>02_02_0629 +
12386214-12386533,12386666-12386749,12386834-12386972,
12387990-12388061,12388158-12388252,12388397-12388483,
12388554-12388629,12388738-12389031,12389526-12389665,
12389751-12389939,12390028-12390118,12390206-12390332,
12391146-12391253,12391343-12391433,12391676-12391685
Length = 640
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 174 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 278
R + +AKLR +AKEK +R+ + KE A+ +E
Sbjct: 515 RRNDAKAKLRAAKAKEKELREGLKNDMKEGATPIE 549
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 189 EAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIV 338
E ++ E + EK++ D +L EE A +EE S T + +DK+V
Sbjct: 964 EVQVAETTSTEKIVEDKELAEETTEGEATAEVHIEE-TSTTERTVEDKVV 1012
>04_04_0871 +
28898262-28898534,28899552-28900015,28900242-28900356,
28900510-28901157,28901282-28901374,28901658-28901795,
28902147-28902206
Length = 596
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 180 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTA 314
+KK+A+ +E++ K K R+ + ++EKE+A A + + + GT+
Sbjct: 505 AKKKARAKELK-KLKKAREKEKEKEKEKAQASQSQRTQSNVRGTS 548
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 180 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMA 302
++++A L E++ +EK+ +LKEE+ R ++ A E A
Sbjct: 680 AQRKAYLEELDYREKLFYKKQLKEERMRRKIMKKMAAEASA 720
>11_04_0097 + 13448740-13450725
Length = 661
Score = 27.5 bits (58), Expect = 6.3
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +3
Query: 147 VLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 317
+L GA ++ KL E +EK A+ EEK RA AL K EE AK
Sbjct: 541 LLEGALQKDGRDGDMTKLYEDVEREKAEAAARAAEEKARAEAL-AKEEEERKKAEAK 596
>05_01_0542 + 4729099-4729419,4730837-4731086,4731387-4731751
Length = 311
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 168 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEI---KALEEMASGTAKK 320
+ +LSKKE K +E+E + ++ + +L + + E K E+ A G K+
Sbjct: 152 ERQLSKKELKKKELEELDAILAELELSSKSNNDAQNETNGKKGAEQAADGENKE 205
>03_03_0254 +
15884149-15884295,15884765-15884803,15884958-15885136,
15887175-15887310,15887769-15887865,15888448-15888534,
15888621-15888721,15888905-15888939,15889520-15889577,
15889650-15889724,15890048-15890135,15890155-15890308,
15890395-15890638
Length = 479
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 207 IEAKEKVIRDAKLKEEKERASALE-IKAL 290
++AKE +I A KE KER+S+ E IKAL
Sbjct: 198 LDAKELLIYAAGAKESKERSSSWEFIKAL 226
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 171 NRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KD 329
N LS+KEAKLR ++ E + R EKE S +++L M K+ D
Sbjct: 238 NELSEKEAKLRRLQ--EDLSR-----REKEHVSDASLQSLRSMVMALQKENSD 283
>02_01_0170 -
1174224-1174321,1174429-1174588,1174673-1174823,
1175005-1175156,1175647-1175768,1176773-1176785
Length = 231
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 129 SFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERAS 269
SF +G+L + S K A ++I + I + K+K EKE A+
Sbjct: 148 SFHYMGLLKNVMRLSMASLKGADAKDISSSIAAIANEKIKAEKEAAA 194
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 168 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 296
Q++LSK+E + +EAKE + D EEKER A + LEE
Sbjct: 501 QSQLSKEEIERMTMEAKEYMAAD----EEKERIKAKNL--LEE 537
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,998,075
Number of Sequences: 37544
Number of extensions: 165849
Number of successful extensions: 573
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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