Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H18
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-737|AAF51014.1|  118|Drosophila melanogaster CG15432-PA...    92   9e-19
AY070840-1|AAL48462.1|  790|Drosophila melanogaster GH21062p pro...    29   5.4  
AE014296-690|AAF47788.2|  790|Drosophila melanogaster CG32264-PB...    29   5.4  

>AE014134-737|AAF51014.1|  118|Drosophila melanogaster CG15432-PA
           protein.
          Length = 118

 Score = 91.9 bits (218), Expect = 9e-19
 Identities = 39/54 (72%), Positives = 48/54 (88%)
 Frame = +2

Query: 329 TKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 490
           TKAE+A +  QEKM+ +RI+ KA+ THK+RVEKFN+HLD+LTEHFDIPKVSWTK
Sbjct: 65  TKAELASKKQQEKMRNKRIMDKAQTTHKERVEKFNEHLDTLTEHFDIPKVSWTK 118


>AY070840-1|AAL48462.1|  790|Drosophila melanogaster GH21062p
           protein.
          Length = 790

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = +2

Query: 341 IAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHL 442
           + YQ  Q++ Q+Q++LQ+ +    Q+ ++ +QHL
Sbjct: 2   LQYQQPQQQQQQQQLLQQEQQQQLQQQQQQHQHL 35


>AE014296-690|AAF47788.2|  790|Drosophila melanogaster CG32264-PB,
           isoform B protein.
          Length = 790

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = +2

Query: 341 IAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHL 442
           + YQ  Q++ Q+Q++LQ+ +    Q+ ++ +QHL
Sbjct: 2   LQYQQPQQQQQQQQLLQQEQQQQLQQQQQQHQHL 35


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,617,594
Number of Sequences: 53049
Number of extensions: 488049
Number of successful extensions: 1182
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)