Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H18
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93785-7|CAB07863.1|  107|Caenorhabditis elegans Hypothetical pr...    59   4e-09
Z93785-6|CAB07862.1|  104|Caenorhabditis elegans Hypothetical pr...    59   4e-09
Z92803-12|CAB07248.1|  107|Caenorhabditis elegans Hypothetical p...    59   4e-09
Z92803-11|CAB07247.1|  104|Caenorhabditis elegans Hypothetical p...    59   4e-09
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in...    31   0.71 
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in...    31   0.71 
Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z93785-7|CAB07863.1|  107|Caenorhabditis elegans Hypothetical
           protein K01G5.8b protein.
          Length = 107

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 23/55 (41%), Positives = 41/55 (74%)
 Frame = +2

Query: 326 RTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 490
           +T+AE+ ++  ++    +R+L++A ++H+++VEK N+ L  +TE  DIPKVSWTK
Sbjct: 53  KTEAELRFEARRQANMAERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 107


>Z93785-6|CAB07862.1|  104|Caenorhabditis elegans Hypothetical
           protein K01G5.8a protein.
          Length = 104

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 23/55 (41%), Positives = 41/55 (74%)
 Frame = +2

Query: 326 RTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 490
           +T+AE+ ++  ++    +R+L++A ++H+++VEK N+ L  +TE  DIPKVSWTK
Sbjct: 50  KTEAELRFEARRQANMAERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 104


>Z92803-12|CAB07248.1|  107|Caenorhabditis elegans Hypothetical
           protein K01G5.8b protein.
          Length = 107

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 23/55 (41%), Positives = 41/55 (74%)
 Frame = +2

Query: 326 RTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 490
           +T+AE+ ++  ++    +R+L++A ++H+++VEK N+ L  +TE  DIPKVSWTK
Sbjct: 53  KTEAELRFEARRQANMAERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 107


>Z92803-11|CAB07247.1|  104|Caenorhabditis elegans Hypothetical
           protein K01G5.8a protein.
          Length = 104

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 23/55 (41%), Positives = 41/55 (74%)
 Frame = +2

Query: 326 RTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK 490
           +T+AE+ ++  ++    +R+L++A ++H+++VEK N+ L  +TE  DIPKVSWTK
Sbjct: 50  KTEAELRFEARRQANMAERMLKQAALSHREKVEKLNKQLGEMTEFNDIPKVSWTK 104


>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
            interacting proteinprotein 1, isoform d protein.
          Length = 2350

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = +2

Query: 311  TNVDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFD 466
            TN  R  +     +  QEK Q +++++  E TH+ R+++    +  L +  D
Sbjct: 2097 TNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQLD 2148


>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
            interacting proteinprotein 1, isoform a protein.
          Length = 2396

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = +2

Query: 311  TNVDRRTKAEIAYQNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFD 466
            TN  R  +     +  QEK Q +++++  E TH+ R+++    +  L +  D
Sbjct: 2170 TNKQREEQERQLIRMRQEKGQIEKVIENRERTHRNRIKQLEDQIAILRDQLD 2221


>Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical
           protein T28F3.4a protein.
          Length = 573

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/65 (23%), Positives = 33/65 (50%)
 Frame = +3

Query: 558 ISNQIAAKFLYFIIFFGN*DNHYISYMYFFLY**CMPICWKWHSSTKLTRMPPFTVSLEN 737
           I+N   A FL  I +F +  N  + +++F +   CM        ++ L+  P +T ++ +
Sbjct: 385 IANFGGALFLILITYFVDCTNPTLGFVFFCMMYGCMGTLVSGFYTSLLSLAPKYTATMSS 444

Query: 738 *TLYC 752
            +++C
Sbjct: 445 ISVFC 449


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,945,777
Number of Sequences: 27780
Number of extensions: 281904
Number of successful extensions: 716
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)