Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H18
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   7.4  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    21   9.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.8  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   9.8  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +2

Query: 350 QNMQEKMQKQRILQKAEMTHKQRVEKFNQHLDSLTEHFDIPKVSWTK*NHEQ 505
           +N +E  ++ R   + E+  K        H   LT HF  PKV     N E+
Sbjct: 481 RNNKEDSEEFRQRLRKELDSKTGGVNLKGHAHWLTLHFKDPKVESAFHNAEE 532


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 690 LSAISSRWAYITNTGKNTY 634
           LS     W + +++G NTY
Sbjct: 39  LSKNGDEWTFTSSSGDNTY 57


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +2

Query: 308 PTNVDRRTKAEIAYQNMQEKMQK--QRILQKAEMTHKQRV 421
           PT++   T+AEI  +++Q +  K   R +Q  + + K+++
Sbjct: 128 PTSIPYATRAEIKTESIQPETTKVDTREVQPHDASEKEQL 167


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 690 LSAISSRWAYITNTGKNTY 634
           LS     W + +++G NTY
Sbjct: 41  LSKNGDEWTFTSSSGDNTY 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,393
Number of Sequences: 438
Number of extensions: 4112
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)