Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_H15
(813 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 259 7e-68
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 241 2e-62
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 227 3e-58
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 205 9e-52
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 205 1e-51
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 140 5e-32
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 131 2e-29
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 120 3e-26
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 120 4e-26
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 120 6e-26
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 119 8e-26
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 119 8e-26
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 119 8e-26
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 119 8e-26
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 117 3e-25
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 116 5e-25
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 116 5e-25
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 116 7e-25
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 116 7e-25
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 116 7e-25
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 116 9e-25
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 116 9e-25
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 115 1e-24
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 115 1e-24
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 115 2e-24
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 115 2e-24
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 114 2e-24
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 114 2e-24
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 114 2e-24
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 114 3e-24
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 113 4e-24
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 113 5e-24
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 113 5e-24
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 113 7e-24
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 113 7e-24
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 113 7e-24
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 112 9e-24
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 112 9e-24
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 111 2e-23
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 111 2e-23
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 111 2e-23
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 111 3e-23
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 111 3e-23
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 111 3e-23
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 110 4e-23
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 110 4e-23
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 110 4e-23
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 110 5e-23
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 110 5e-23
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 110 5e-23
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 109 6e-23
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 109 6e-23
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 109 8e-23
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 109 8e-23
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 109 8e-23
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 109 1e-22
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 109 1e-22
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 109 1e-22
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 109 1e-22
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 108 1e-22
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 108 1e-22
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 108 1e-22
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 108 1e-22
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 108 2e-22
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 108 2e-22
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 108 2e-22
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 108 2e-22
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 107 2e-22
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 107 2e-22
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 107 3e-22
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 107 3e-22
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 107 4e-22
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 107 4e-22
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 107 4e-22
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 107 4e-22
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 107 4e-22
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 107 4e-22
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 107 4e-22
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 106 6e-22
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 106 6e-22
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 106 6e-22
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 106 6e-22
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 106 6e-22
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 106 8e-22
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 106 8e-22
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 106 8e-22
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 106 8e-22
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 106 8e-22
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 106 8e-22
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 105 1e-21
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 105 1e-21
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 105 1e-21
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 105 1e-21
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 105 1e-21
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 105 1e-21
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 105 2e-21
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 105 2e-21
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 105 2e-21
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 104 2e-21
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 104 2e-21
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 104 2e-21
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 104 3e-21
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 104 3e-21
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 104 3e-21
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 104 3e-21
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 104 3e-21
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 103 4e-21
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 103 4e-21
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 103 4e-21
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 103 4e-21
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 103 4e-21
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 103 4e-21
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 103 5e-21
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 103 5e-21
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 103 5e-21
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 103 5e-21
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 103 5e-21
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 103 7e-21
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 103 7e-21
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 103 7e-21
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 103 7e-21
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 102 9e-21
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 102 9e-21
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 102 9e-21
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 102 9e-21
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 102 1e-20
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 101 2e-20
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 101 2e-20
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 101 2e-20
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 101 2e-20
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 101 2e-20
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 101 2e-20
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 101 2e-20
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 101 2e-20
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 101 2e-20
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 101 3e-20
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 101 3e-20
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 101 3e-20
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 101 3e-20
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 101 3e-20
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 101 3e-20
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 100 4e-20
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 100 4e-20
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 100 4e-20
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 100 4e-20
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 100 4e-20
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 100 4e-20
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 100 5e-20
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 100 5e-20
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 100 5e-20
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 100 5e-20
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 100 5e-20
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 100 5e-20
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 99 7e-20
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 99 7e-20
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 99 7e-20
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 99 7e-20
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 99 7e-20
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 100 9e-20
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 100 9e-20
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 100 9e-20
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 100 9e-20
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 100 9e-20
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 100 9e-20
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 99 1e-19
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 99 1e-19
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 99 1e-19
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 99 1e-19
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 99 1e-19
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 99 2e-19
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 99 2e-19
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 99 2e-19
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 99 2e-19
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 99 2e-19
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 98 2e-19
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 98 2e-19
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 98 2e-19
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 98 2e-19
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 98 3e-19
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 98 3e-19
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 98 3e-19
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 97 4e-19
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 97 4e-19
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 97 4e-19
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 97 4e-19
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 97 4e-19
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 97 4e-19
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 97 5e-19
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 97 5e-19
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 97 5e-19
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 97 5e-19
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 97 5e-19
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 97 5e-19
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 97 6e-19
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 97 6e-19
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 97 6e-19
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 97 6e-19
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 97 6e-19
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 97 6e-19
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 97 6e-19
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 96 8e-19
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 96 8e-19
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 96 8e-19
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 96 8e-19
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 96 8e-19
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 96 8e-19
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 96 8e-19
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 96 1e-18
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 96 1e-18
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 96 1e-18
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 95 1e-18
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 95 1e-18
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 95 1e-18
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 95 1e-18
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 95 1e-18
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 95 1e-18
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 95 1e-18
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 95 1e-18
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 95 1e-18
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 95 1e-18
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 95 2e-18
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 95 2e-18
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 95 2e-18
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 95 2e-18
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 95 2e-18
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 95 2e-18
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 95 2e-18
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 95 2e-18
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 95 2e-18
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 95 2e-18
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 95 2e-18
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 95 2e-18
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 95 2e-18
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 95 2e-18
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 94 3e-18
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 94 3e-18
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 94 3e-18
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 94 3e-18
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 94 3e-18
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 94 4e-18
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 94 4e-18
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 93 6e-18
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 93 6e-18
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 93 6e-18
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 93 8e-18
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 93 8e-18
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 93 8e-18
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 93 8e-18
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 93 8e-18
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 93 1e-17
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 93 1e-17
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 93 1e-17
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 93 1e-17
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 93 1e-17
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 93 1e-17
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 93 1e-17
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 93 1e-17
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 93 1e-17
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 93 1e-17
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 93 1e-17
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 92 1e-17
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 92 1e-17
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 92 1e-17
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 92 1e-17
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 92 1e-17
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 92 2e-17
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 92 2e-17
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 92 2e-17
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 92 2e-17
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 92 2e-17
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 92 2e-17
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 91 2e-17
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 91 2e-17
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 91 2e-17
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 91 2e-17
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 91 2e-17
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 91 2e-17
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 91 3e-17
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 91 3e-17
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 91 3e-17
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 91 3e-17
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 91 4e-17
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 91 4e-17
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 91 4e-17
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 91 4e-17
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 91 4e-17
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 91 4e-17
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 91 4e-17
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 90 5e-17
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 90 5e-17
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 90 5e-17
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 90 5e-17
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 90 7e-17
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 90 7e-17
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 90 7e-17
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 90 7e-17
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 90 7e-17
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 90 7e-17
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 90 7e-17
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 90 7e-17
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 90 7e-17
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 90 7e-17
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 90 7e-17
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 90 7e-17
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 89 9e-17
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 89 9e-17
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 89 9e-17
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 89 9e-17
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 89 9e-17
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 89 9e-17
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 89 9e-17
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 89 9e-17
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 89 9e-17
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 89 9e-17
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 89 1e-16
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 89 1e-16
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 89 1e-16
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 89 1e-16
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 89 1e-16
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 89 1e-16
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 89 1e-16
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 89 1e-16
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 89 1e-16
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 89 1e-16
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 89 1e-16
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 89 1e-16
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 89 1e-16
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 89 1e-16
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 89 1e-16
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 89 1e-16
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 89 1e-16
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 89 2e-16
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 89 2e-16
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 89 2e-16
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 89 2e-16
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 89 2e-16
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 89 2e-16
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 89 2e-16
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 89 2e-16
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 89 2e-16
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 89 2e-16
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 88 2e-16
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 88 2e-16
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 88 2e-16
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 88 2e-16
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 88 2e-16
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 88 2e-16
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 88 2e-16
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 88 2e-16
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 88 2e-16
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 88 2e-16
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 88 2e-16
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 88 3e-16
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 88 3e-16
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 88 3e-16
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 88 3e-16
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 88 3e-16
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 88 3e-16
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 88 3e-16
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 88 3e-16
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 88 3e-16
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 88 3e-16
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 87 4e-16
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 87 4e-16
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 87 4e-16
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 87 4e-16
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 87 4e-16
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 87 4e-16
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 87 4e-16
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 87 4e-16
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 87 4e-16
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 87 4e-16
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 87 4e-16
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 87 5e-16
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 87 5e-16
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 87 5e-16
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 87 5e-16
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 87 5e-16
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 87 5e-16
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 87 5e-16
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 87 5e-16
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 87 5e-16
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 87 5e-16
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 87 5e-16
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 87 7e-16
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 87 7e-16
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 87 7e-16
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 87 7e-16
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 87 7e-16
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 87 7e-16
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 87 7e-16
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 87 7e-16
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 87 7e-16
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 86 9e-16
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 86 9e-16
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 86 9e-16
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 86 9e-16
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 86 9e-16
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 86 9e-16
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 86 9e-16
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 86 9e-16
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 86 9e-16
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 86 9e-16
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 86 9e-16
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 86 1e-15
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 86 1e-15
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 86 1e-15
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 86 1e-15
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 86 1e-15
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 86 1e-15
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 86 1e-15
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 86 1e-15
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 86 1e-15
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 86 1e-15
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 85 2e-15
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 85 2e-15
UniRef50_Q7QWI2 Cluster: GLP_538_22840_21176; n=2; Giardia intes... 85 2e-15
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 85 2e-15
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 85 2e-15
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 85 2e-15
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 85 2e-15
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 85 2e-15
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 85 2e-15
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 85 2e-15
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 85 2e-15
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 85 2e-15
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 85 2e-15
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 85 2e-15
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 85 2e-15
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 85 2e-15
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 85 2e-15
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 85 2e-15
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 85 2e-15
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 85 2e-15
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 85 2e-15
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 85 3e-15
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 85 3e-15
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 85 3e-15
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 85 3e-15
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 85 3e-15
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 85 3e-15
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 85 3e-15
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 85 3e-15
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 84 4e-15
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 84 4e-15
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 84 4e-15
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 84 4e-15
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 84 4e-15
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 84 4e-15
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 84 4e-15
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 84 4e-15
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 84 4e-15
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 84 4e-15
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 84 4e-15
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 84 5e-15
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 84 5e-15
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 84 5e-15
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 84 5e-15
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 84 5e-15
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 84 5e-15
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 84 5e-15
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 84 5e-15
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 84 5e-15
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 84 5e-15
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 83 6e-15
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 83 6e-15
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 83 6e-15
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 83 6e-15
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 83 6e-15
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 83 6e-15
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 83 6e-15
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 83 6e-15
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 83 6e-15
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 83 6e-15
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 83 8e-15
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 83 8e-15
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 83 8e-15
UniRef50_Q4UG97 Cluster: ATP-dependent RNA helicase, putative; n... 83 8e-15
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 83 8e-15
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 83 8e-15
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 83 8e-15
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 83 8e-15
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 83 8e-15
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 83 8e-15
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 83 8e-15
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 83 8e-15
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 83 8e-15
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 83 1e-14
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 83 1e-14
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 83 1e-14
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 83 1e-14
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 83 1e-14
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 83 1e-14
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 83 1e-14
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 83 1e-14
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 83 1e-14
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 83 1e-14
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 82 1e-14
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 259 bits (634), Expect = 7e-68
Identities = 120/164 (73%), Positives = 143/164 (87%), Gaps = 1/164 (0%)
Frame = +3
Query: 324 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 503
WK LK+PPKD R++TSDVT T+GNEFE++CLKRELLMGIFE GWEKPSPIQE SIPIAL
Sbjct: 65 WKRNLKLPPKDNRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIAL 124
Query: 504 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 683
SG+D+LARAKNGTGK+GAY IP+LE++D KKD IQAL++VPTRELALQ SQI I++AKH
Sbjct: 125 SGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHL 184
Query: 684 -DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDXQVA 812
++VM TTGGTNLRDDIMR+ + V V+IATPGR++DLM VA
Sbjct: 185 GGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLMKKGVA 228
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 241 bits (589), Expect = 2e-62
Identities = 119/190 (62%), Positives = 151/190 (79%), Gaps = 4/190 (2%)
Frame = +3
Query: 240 NRISSSNHVGNSISQTKGEVDKSI---DDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEE 410
N++ ++N + N Q + +I DD WK+ LK+PPKD RIKT DVT T+GNEFE+
Sbjct: 30 NQLKNTNTINNGTPQQAQSMAATIRPGDD--WKT-LKLPPKDLRIKTLDVTSTKGNEFED 86
Query: 411 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 590
+CLKRELL+GIFE GWE PS IQE SIPIALSG+D+LARAKNGTGK+GAY IP+LE++D
Sbjct: 87 YCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL 145
Query: 591 KKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQNVQVII 767
KKD IQA+++VPTRELALQ SQICI+++KH +VM TTGGTNLRDD+MR+ V+I
Sbjct: 146 KKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGHVVI 205
Query: 768 ATPGRMIDLM 797
ATPGR++DL+
Sbjct: 206 ATPGRILDLI 215
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 227 bits (554), Expect = 3e-58
Identities = 106/166 (63%), Positives = 132/166 (79%)
Frame = +3
Query: 315 DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIP 494
D WK+ L IP KD R +T DV +T+GN FE+F LKRELLMGIFE G+EKPSPIQE +IP
Sbjct: 19 DRDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIP 78
Query: 495 IALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 674
+A++G+D+LARAKNGTGKT A+ IP LE+V PK + IQALI+VPTRELALQTSQ+ L
Sbjct: 79 VAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLG 138
Query: 675 KHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDXQVA 812
KH I MVTTGGTNLRDDI+R+ + V +++ TPGR++DL +VA
Sbjct: 139 KHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVA 184
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 205 bits (501), Expect = 9e-52
Identities = 97/144 (67%), Positives = 117/144 (81%), Gaps = 3/144 (2%)
Frame = +3
Query: 240 NRISSSNHVGNSISQTKGEVDKSI---DDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEE 410
N++ ++N + N Q + +I DD WK LK+PPKD RIKTSDVT T+GNEFE+
Sbjct: 43 NQLKNTNTINNGTQQQAQSMTTTIKPGDD--WKKTLKLPPKDLRIKTSDVTSTKGNEFED 100
Query: 411 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 590
+CLKRELLMGIFE GWEKPSPIQE SIPIALSG+D+LARAKNGTGK+GAY IP+LE++D
Sbjct: 101 YCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL 160
Query: 591 KKDTIQALIVVPTRELALQTSQIC 662
KKD IQA+++VPTRELALQ SQIC
Sbjct: 161 KKDNIQAMVIVPTRELALQVSQIC 184
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 205 bits (500), Expect = 1e-51
Identities = 95/164 (57%), Positives = 127/164 (77%), Gaps = 1/164 (0%)
Frame = +3
Query: 324 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 503
WK L PPKD R +T DVT T+G+ FE+F L+RELLMGI+ G+E+PSPIQE +IP+AL
Sbjct: 12 WKQGLAAPPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMAL 71
Query: 504 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH- 680
+G+D+LARAKNGTGKT ++ IP L +++ IQALI+VPTRELALQTSQ+C L H
Sbjct: 72 TGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHI 131
Query: 681 TDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDXQVA 812
+++VM+TTGGT LRDDI+R+ Q V +++ TPGR++DL +A
Sbjct: 132 PNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIA 175
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 140 bits (338), Expect = 5e-32
Identities = 70/156 (44%), Positives = 111/156 (71%), Gaps = 3/156 (1%)
Frame = +3
Query: 351 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 530
+D RI T DV + G F LK+ELLMG+ ++G+++ +P+QE +IP L+ +DV+ARA
Sbjct: 7 RDTRITTDDVKGS-GVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARA 65
Query: 531 KNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDI--RVMV 701
KNGTGKTG++ IP+L+ V+P KD IQAL+++ TRELA+QT+++ L+K+ D+ R+M
Sbjct: 66 KNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMC 125
Query: 702 TTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDXQV 809
GG ++ +D R + V++ATPGR+ L+D ++
Sbjct: 126 AIGGVSIAEDRERAREKPLVVLATPGRLQQLIDEEI 161
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 131 bits (317), Expect = 2e-29
Identities = 63/151 (41%), Positives = 101/151 (66%)
Frame = +3
Query: 357 RRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKN 536
+R+ + DV +T G +E L LL I + G++ PSP+Q ASIP L GK++L R+KN
Sbjct: 95 KRLLSEDVRETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKN 154
Query: 537 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 716
GTGKT +Y +P+L ++ + +IQ +I+VP RELALQ S+ +++ T + GGT
Sbjct: 155 GTGKTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGT 214
Query: 717 NLRDDIMRIYQNVQVIIATPGRMIDLMDXQV 809
+++DDI+R+ V V++ TPGR++DL++ +V
Sbjct: 215 SMQDDIIRVSNGVHVMVGTPGRIVDLVEKRV 245
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 120 bits (290), Expect = 3e-26
Identities = 57/133 (42%), Positives = 88/133 (66%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FEEF L+ EL+ I G+ +P+ +Q +IPIAL+G D++ R+K G+GKT AY IP++
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
K+ I+ALI++PTRELA+Q +++ L K + IR +V GG ++ I I + +
Sbjct: 64 T-AKEKGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 762 IIATPGRMIDLMD 800
I+ TPGR +DL+D
Sbjct: 123 IVGTPGRTLDLID 135
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 120 bits (289), Expect = 4e-26
Identities = 60/137 (43%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+ F+E L R +L G+ G+ KP+PIQ +IPI+L GKDV+ A G+GKT A+ +P+L
Sbjct: 293 SSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPIL 352
Query: 576 EQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 746
E++ PKK T + +I+ PTRELA+Q + ++LA HTDI+ + GG +L+ +
Sbjct: 353 ERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELR 412
Query: 747 QNVQVIIATPGRMIDLM 797
V+IATPGR ID M
Sbjct: 413 LRPDVVIATPGRFIDHM 429
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 120 bits (288), Expect = 6e-26
Identities = 63/151 (41%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
Frame = +3
Query: 363 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 542
+K+ DT+G F+ F LK +L GI E G+ PSP+Q SIPI L GKD++A+A+ GT
Sbjct: 36 LKSKHKQDTQG--FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGT 93
Query: 543 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 722
GKT A+ IP+L ++ KD I+ALI+ PTRELA+Q S+ ++L + I+ + GG ++
Sbjct: 94 GKTAAFAIPILNTLNRNKD-IEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSI 152
Query: 723 RDDIMRIYQNVQVIIATPGRMID-LMDXQVA 812
+ + + + +IATPGR++D L + ++A
Sbjct: 153 KRQCDLLEKKPKAMIATPGRLLDHLQNGRIA 183
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 119 bits (287), Expect = 8e-26
Identities = 61/131 (46%), Positives = 86/131 (65%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F E + E+ I E G+E+PSPIQ +IP L+G DV+ +A+ GTGKT A+ IPV+E
Sbjct: 7 KFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVE 66
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+V + +QALI+ PTRELA+Q S +L+KH IR + GG ++ I + Q VQ
Sbjct: 67 KVSTGRH-VQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALKQGVQ 125
Query: 759 VIIATPGRMID 791
V+I TPGR+ID
Sbjct: 126 VVIGTPGRIID 136
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 119 bits (287), Expect = 8e-26
Identities = 54/116 (46%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Frame = +3
Query: 447 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVP 626
E G + +PIQE +IP+ LSGKD++ +AK GTGKT A+ +P+LE++DP+ +QALIV P
Sbjct: 22 ENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAP 81
Query: 627 TRELALQ-TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMID 791
TRELALQ T++I L + DI V+ GG ++ + ++ N +++ATPGR++D
Sbjct: 82 TRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVATPGRLLD 137
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 119 bits (287), Expect = 8e-26
Identities = 56/132 (42%), Positives = 86/132 (65%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE+ L ++LL GIF G+E+PS IQ+ +I + GKDVLA+A++GTGKTG + I L++
Sbjct: 58 FEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQR 117
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+DP + Q +I+ P RELA Q + + ++ +I GGT+ ++ + Q V +
Sbjct: 118 IDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQETREKCKQGVHI 177
Query: 762 IIATPGRMIDLM 797
IIATPGR+ID+M
Sbjct: 178 IIATPGRLIDMM 189
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 119 bits (287), Expect = 8e-26
Identities = 58/131 (44%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F EF + ELL I + G+E+P+PIQ +IP L GKDV +A+ GTGKT A+ IP++E+
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIER 66
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+DP +QAL++ PTRELA+QT++ L K+ + V+ GG + + + VQ
Sbjct: 67 LDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRALKGTVQ 126
Query: 759 VIIATPGRMID 791
V+I TPGR+ID
Sbjct: 127 VVIGTPGRVID 137
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 117 bits (282), Expect = 3e-25
Identities = 65/170 (38%), Positives = 97/170 (57%), Gaps = 5/170 (2%)
Frame = +3
Query: 306 SIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEA 485
S D G K I P R +T+D TDT +F + +L I E+G++ P+PIQ
Sbjct: 55 SYGDTG-KISGSIHPLTYRNQTTDHTDTM--QFRSLAIIEPILQAIEEEGYQTPTPIQAE 111
Query: 486 SIPIALSGKDVLARAKNGTGKTGAYCIPVLE-----QVDPKKDTIQALIVVPTRELALQT 650
+IP+ L G D+L A+ GTGKT A+ IPVL+ + + KK I++LI+ PTRELA+Q
Sbjct: 112 AIPLILDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQI 171
Query: 651 SQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 800
+ +HT + V GG N + + + ++IATPGR++DLM+
Sbjct: 172 GESFKAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLLDLMN 221
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 116 bits (280), Expect = 5e-25
Identities = 65/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)
Frame = +3
Query: 258 NHVGNSISQTKGEVDKSID-DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELL 434
+H + S+ + + +D + K K P+++ + + T++ F+EF L R +L
Sbjct: 744 HHPDDEASEPDSDAESEVDAEEEAKRKAFFAPEEKTDEDA-ATNSAKRSFQEFNLSRPIL 802
Query: 435 MGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTI 605
G+ + P+PIQ+ +IP+AL GKD++ A G+GKT A+ +P+LE++ P+K T
Sbjct: 803 RGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTS 862
Query: 606 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRM 785
+ I++PTRELA+Q + +LA +TDI GG +LR+ + + VIIATPGR
Sbjct: 863 RVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRF 922
Query: 786 IDLM 797
ID M
Sbjct: 923 IDHM 926
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 116 bits (280), Expect = 5e-25
Identities = 49/130 (37%), Positives = 85/130 (65%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E L LL + G+E+ +PIQ +IP AL GKD++ +A+ GTGKT A+ +P+L++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
VD K+++Q +++ PTRELA+Q + ++ KH +R++ GG ++ I + ++ +
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 762 IIATPGRMID 791
I+ TPGR++D
Sbjct: 124 IVGTPGRILD 133
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 116 bits (279), Expect = 7e-25
Identities = 61/156 (39%), Positives = 99/156 (63%), Gaps = 3/156 (1%)
Frame = +3
Query: 333 KLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK 512
K+K+ +R++K + + FEE L R LL + + G+ +P+PIQ +IP+AL+GK
Sbjct: 171 KIKVLQSNRKLKK--IVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGK 228
Query: 513 DVLARAKNGTGKTGAYCIPVLEQV---DPKKDTIQALIVVPTRELALQTSQICIELAKHT 683
D+LA A G+GKT A+ +PVLE++ D + I+ LI++PTRELALQ + LA+ +
Sbjct: 229 DILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFS 288
Query: 684 DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMID 791
+I + GG + + + + ++ V+IATPGR+ID
Sbjct: 289 NITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLID 324
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 116 bits (279), Expect = 7e-25
Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 4/178 (2%)
Frame = +3
Query: 276 ISQTKGEVDKSIDDVGW-KSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEK 452
I+ G D+S D K K P+++ D+ + F+ F L R +L G+
Sbjct: 266 ITSDDGSGDESEDAAEIEKQKSFFAPEEKPSANGDLKSAKS--FQAFSLSRPILRGLTSV 323
Query: 453 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTIQALIVV 623
G+ P+PIQ +IP+AL GKDV+ A G+GKTGA+ IP+LE++ P+K T + I++
Sbjct: 324 GFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILM 383
Query: 624 PTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLM 797
PTRELA+Q + +LA TDI GG +LR+ + + VIIATPGR ID M
Sbjct: 384 PTRELAVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHM 441
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 116 bits (279), Expect = 7e-25
Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 3/137 (2%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+ F+ L R +L G+ G+ KP+PIQ +IPIAL GKDV+ A G+GKT A+ +P+L
Sbjct: 276 SSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL 335
Query: 576 EQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 746
E++ PKK T + +++ PTRELA+Q + +LA HTDI+ + GG +L+ +
Sbjct: 336 ERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGELR 395
Query: 747 QNVQVIIATPGRMIDLM 797
V+IATPGR ID M
Sbjct: 396 LRPDVVIATPGRFIDHM 412
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 116 bits (278), Expect = 9e-25
Identities = 49/130 (37%), Positives = 85/130 (65%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L ++L + + G+E+PSPIQ +IP L GKDV+ +A+ GTGKT A+ +P++E+
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+ P + +QAL++ PTRELA+Q ++ ++ +H ++ + GG ++ I + V V
Sbjct: 68 LVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDV 127
Query: 762 IIATPGRMID 791
+I TPGR++D
Sbjct: 128 VIGTPGRILD 137
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 116 bits (278), Expect = 9e-25
Identities = 54/134 (40%), Positives = 87/134 (64%)
Frame = +3
Query: 390 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 569
+G EF EF + ++ + + G+E +PIQ ++P+ L G DV+ A+ GTGKT A+ IP
Sbjct: 2 KGLEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIP 61
Query: 570 VLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
VLE ++ ++ QALI+ PTREL LQ S+ + K+ ++V+ GG ++ + I ++ +
Sbjct: 62 VLENLEAER-VPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRR 120
Query: 750 NVQVIIATPGRMID 791
V VI+ATPGR+ID
Sbjct: 121 GVHVIVATPGRLID 134
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 115 bits (277), Expect = 1e-24
Identities = 60/177 (33%), Positives = 104/177 (58%), Gaps = 8/177 (4%)
Frame = +3
Query: 303 KSIDDVGWKSKLKIPPKDRRIKTSDVTDT---RGNEFEEFCLKRELLMGIFEKGWEKPSP 473
K+ + VG+ +I D + +D+ + F+ L +L GI ++G++ P+P
Sbjct: 2 KNTNIVGFADPKEISDNDEENEINDIKKKVYKKSGGFQSMALSFPILKGILKRGYKIPTP 61
Query: 474 IQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELALQ 647
IQ +IP+AL G+D++A A+ G+GKT + IP+ E++ ++ + +ALI+ PTRELALQ
Sbjct: 62 IQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEKLKIRQAKVGARALILSPTRELALQ 121
Query: 648 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDL---MDXQV 809
T + EL + T ++ + GG N+ + I+ N ++IATPGR + + MD Q+
Sbjct: 122 TLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNPDILIATPGRFLHICIEMDLQL 178
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 115 bits (277), Expect = 1e-24
Identities = 50/130 (38%), Positives = 87/130 (66%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++F L +L+ I G+E+ +PIQ +IP+ LS KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
++P+ IQA+++ PTRELA+Q S+ ++ + +V+ GG ++ I + +N +
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNI 124
Query: 762 IIATPGRMID 791
I+ TPGR++D
Sbjct: 125 IVGTPGRLLD 134
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 115 bits (276), Expect = 2e-24
Identities = 55/131 (41%), Positives = 90/131 (68%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+FEE +K+ +L + + G+EK PIQEA+IP+ L+G+DV+ +A GTGKTGAY I +L+
Sbjct: 3 KFEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQ 62
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
++ + IQ LIV PTRELA+Q ++ + AK+T +R + GG ++ + + + +
Sbjct: 63 EI-KEGGGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAE 121
Query: 759 VIIATPGRMID 791
+++ATPGR+ID
Sbjct: 122 ILVATPGRLID 132
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 115 bits (276), Expect = 2e-24
Identities = 53/130 (40%), Positives = 86/130 (66%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+E L +E++ I G+E+ +PIQ +IP++L KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
V+ K +QAL+V PTRELA+Q S+ ++ +RV+ GG ++ I + ++ V
Sbjct: 64 VNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHV 123
Query: 762 IIATPGRMID 791
I+ TPGR+ID
Sbjct: 124 IVGTPGRIID 133
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 114 bits (275), Expect = 2e-24
Identities = 54/131 (41%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++ L+ ELL I E G+ +PSPIQ +IP L G+DV+ +A+ GTGKT A+ +P+L++
Sbjct: 7 FKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQR 66
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+D ++QAL++ PTRELALQ + LAKH +R++ GG + + + Q
Sbjct: 67 IDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGAQ 126
Query: 759 VIIATPGRMID 791
V++ TPGR++D
Sbjct: 127 VVVGTPGRILD 137
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 114 bits (275), Expect = 2e-24
Identities = 55/145 (37%), Positives = 93/145 (64%), Gaps = 8/145 (5%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++F L E+L I E+G+ P+PIQ +IP+ LSG+DV+ A+ GTGKT ++ +P++++
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 582 VDPKKDT--------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 737
+ P+ +T ++ALI+ PTRELA Q + AKHT +R V GG ++ +
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMA 132
Query: 738 RIYQNVQVIIATPGRMIDLMDXQVA 812
+ + V+++IATPGR++D + + A
Sbjct: 133 ELRRGVEILIATPGRLLDHVQQKTA 157
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 114 bits (275), Expect = 2e-24
Identities = 56/133 (42%), Positives = 91/133 (68%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F LK +LL I EKG+EKP+PIQ SIPIA++G D++ +A+ GTGKT ++ IP+L +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
V K + +QAL++ PTRELA+Q ++ L++ I+V+ GG ++ + + +N ++
Sbjct: 66 V-IKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 762 IIATPGRMIDLMD 800
I+ TPGR++D M+
Sbjct: 125 IVGTPGRLMDHMN 137
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 114 bits (274), Expect = 3e-24
Identities = 53/133 (39%), Positives = 85/133 (63%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F + L ++L + + G+ + +PIQEA+ PI +G D+ A A+ G+GKT A IP+++
Sbjct: 2 KFSDLELSADILKALDKMGYNEMTPIQEATYPIIFAGHDLCALAETGSGKTAACAIPLIQ 61
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+VDP D IQ L++VPTREL +Q + ++A TD+ GG + I R+ Q V
Sbjct: 62 KVDPSLDAIQGLVIVPTRELCMQYVEEIRKIAAKTDVIPYAVYGGFDRAAQIARVKQTVH 121
Query: 759 VIIATPGRMIDLM 797
+++ATPGR+IDL+
Sbjct: 122 ILVATPGRLIDLL 134
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 113 bits (273), Expect = 4e-24
Identities = 49/134 (36%), Positives = 87/134 (64%), Gaps = 1/134 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+ L ++ L+G+ +KG+ P+PIQ +IP L G D++A A+ G+GKT AY +P++ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 582 VDP-KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
++ + +++LI+ PTRELALQT ++ EL K T+++ + GG+ L D +
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 759 VIIATPGRMIDLMD 800
+I+ATPGR+ +++
Sbjct: 135 IIVATPGRLTFILE 148
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 113 bits (272), Expect = 5e-24
Identities = 55/153 (35%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Frame = +3
Query: 345 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 524
P ++ + + F+ L + G+ KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 20 PDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVA 79
Query: 525 RAKNGTGKTGAYCIPVLEQVD-PKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVM 698
A+ G+GKT A+ IP+ E++ P+ T +ALI+ PTRELALQT + EL K T ++
Sbjct: 80 MARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLKTA 139
Query: 699 VTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLM 797
+ GG ++ D +++N +II TPGR++ ++
Sbjct: 140 LILGGDSMDDQFAALHENPDIIIGTPGRLMHVI 172
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 113 bits (272), Expect = 5e-24
Identities = 57/134 (42%), Positives = 85/134 (63%), Gaps = 3/134 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E L + +L + E G+EKPSPIQE +IP AL+G+DVL A+ GTGKT A+ P+L++
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 582 VD---PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ P I++LI+ PTRELALQ + KH +R V GG + + ++ +
Sbjct: 63 LGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKG 122
Query: 753 VQVIIATPGRMIDL 794
V +++ATPGR++DL
Sbjct: 123 VDILVATPGRLLDL 136
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 113 bits (271), Expect = 7e-24
Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
Frame = +3
Query: 381 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 560
T + +F E L E+ I E G+E+ SPIQ +IP+ L GKD++ A+ GTGKT A+
Sbjct: 4 TSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAF 63
Query: 561 CIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIM 737
IP +E ++ + +QALI+ PTREL +Q S+ +L K+ + V+ GG + +
Sbjct: 64 AIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLR 123
Query: 738 RIYQNVQVIIATPGRMIDLM 797
+ +N Q++IATPGRM+D M
Sbjct: 124 ALRKNPQIVIATPGRMMDHM 143
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 113 bits (271), Expect = 7e-24
Identities = 61/198 (30%), Positives = 113/198 (57%), Gaps = 6/198 (3%)
Frame = +3
Query: 213 DKFGKMMTENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTR 392
+K K +N+ + +++ + S K E++ S K + P D + + T ++
Sbjct: 172 EKQAKKSNKNKNADADNKKSKKSNKKEEIESS-------EKFESFPMDENNEQEEETTSK 224
Query: 393 GNE----FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 560
+ F+ L + LL I +KG+ P+PIQ SIP+ L G D++ A+ G+GKTGA+
Sbjct: 225 KKKKTGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAF 284
Query: 561 CIPVLEQVDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 734
IP+++++ T ++A+I+ PTRELA+QT ++ + ++ T +R ++ GG ++ D
Sbjct: 285 VIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQF 344
Query: 735 MRIYQNVQVIIATPGRMI 788
+ +N +IIATPGR++
Sbjct: 345 TDLARNPDIIIATPGRLM 362
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 113 bits (271), Expect = 7e-24
Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Frame = +3
Query: 366 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 545
K + T + F+ L R +L G+ G+E P+ IQ+ +IP+AL GKD++ A G+G
Sbjct: 249 KEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSG 308
Query: 546 KTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGT 716
KT A+ +P+LE++ PKK T + LI+ PTRELA+Q + ++A TDI V + GG
Sbjct: 309 KTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGL 368
Query: 717 NLRDDIMRIYQNVQVIIATPGRMIDLM 797
+L+ + + ++IATPGR ID M
Sbjct: 369 SLKLQEQELRKRPDIVIATPGRFIDHM 395
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 112 bits (270), Expect = 9e-24
Identities = 60/147 (40%), Positives = 92/147 (62%), Gaps = 4/147 (2%)
Frame = +3
Query: 363 IKTSDVTDTRGN--EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAK 533
+ T V D N FE+F L E+L+ I +KG+EKP+ IQ+ +P ALS KD++A+A+
Sbjct: 5 VNTGSVLDETKNYERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQ 64
Query: 534 NGTGKTGAYCIPVLEQVDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 710
GTGKT A+ IP+LE++D K + ++A+IV PTRELALQ + L +++ G
Sbjct: 65 TGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYG 124
Query: 711 GTNLRDDIMRIYQNVQVIIATPGRMID 791
G +L + + V +++ TPGR+ID
Sbjct: 125 GQSLEKQFKDLEKGVDIVVGTPGRIID 151
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 112 bits (270), Expect = 9e-24
Identities = 50/130 (38%), Positives = 81/130 (62%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+E L + I E G+E+P+P+Q ++ GKDV+ R+K GTGKT A+ IP+LE+
Sbjct: 22 FDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILER 81
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+ + AL++ PTRELA+Q +Q LAKH D+ V+ GG ++ + + ++ ++
Sbjct: 82 IADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAEI 141
Query: 762 IIATPGRMID 791
I+ TPGR+ D
Sbjct: 142 IVGTPGRIYD 151
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 111 bits (268), Expect = 2e-23
Identities = 55/150 (36%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Frame = +3
Query: 351 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 530
K+ + K ++ G F+ L + ++ GI ++G++ P+PIQ +IPIAL G+DV+A A
Sbjct: 24 KENKKKAGKKSNKSGG-FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMA 82
Query: 531 KNGTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVT 704
+ G+GKT + IP+ E++ + K +ALI+ PTRELALQT + E+ + T ++ V
Sbjct: 83 RTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVI 142
Query: 705 TGGTNLRDDIMRIYQNVQVIIATPGRMIDL 794
GG ++ + I+ N +I+ATPGR + +
Sbjct: 143 LGGDSMDNQFSAIHGNPDIIVATPGRFLHI 172
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 111 bits (268), Expect = 2e-23
Identities = 49/133 (36%), Positives = 84/133 (63%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F E L ++ + E G+E+ +PIQE +IP+A+ GKD++ +A+ GTGKT A+ IP++E
Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVE 62
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+ P +Q L+VVPTRELA+Q ++ + K IR + GG + R + + +
Sbjct: 63 AIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPH 122
Query: 759 VIIATPGRMIDLM 797
+++ TPGR+++ M
Sbjct: 123 IVVGTPGRLLEHM 135
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 111 bits (267), Expect = 2e-23
Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Frame = +3
Query: 345 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 524
P ++ + + F+ L + GI +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 79 PDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVA 138
Query: 525 RAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVM 698
A+ G+GKT + +P+ E++ + +ALI+ PTRELALQT + EL K T ++
Sbjct: 139 MARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTA 198
Query: 699 VTTGGTNLRDDIMRIYQNVQVIIATPGRMI 788
+ GG + D +++N +IIATPGR++
Sbjct: 199 LILGGDRMEDQFAALHENPDIIIATPGRLV 228
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 111 bits (266), Expect = 3e-23
Identities = 52/150 (34%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Frame = +3
Query: 345 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 524
P ++ + + F+ L + G+ +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 133 PDTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVA 192
Query: 525 RAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVM 698
A+ G+GKT + IP+ E++ + +AL++ PTRELALQT + EL K T +++
Sbjct: 193 MARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKFTGLKMA 252
Query: 699 VTTGGTNLRDDIMRIYQNVQVIIATPGRMI 788
+ GG + D +++N +IIATPGR++
Sbjct: 253 LILGGDRMEDQFAALHENPDIIIATPGRLM 282
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 111 bits (266), Expect = 3e-23
Identities = 53/132 (40%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKD-VLARAKNGTGKTGAYCIPVL 575
+F++ L +L I KG+E P+PIQE IP+ LSGK+ V+ +A+ GTGKT A+ IP++
Sbjct: 3 KFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLI 62
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
E++D K + +QAL++ PTRELALQ L + + ++ GG ++ + I + + V
Sbjct: 63 ERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRV 122
Query: 756 QVIIATPGRMID 791
+++ TPGR+ID
Sbjct: 123 DLVVGTPGRIID 134
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 111 bits (266), Expect = 3e-23
Identities = 52/137 (37%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Frame = +3
Query: 390 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 569
+G F+ L +L I + G++ P+PIQ +IP+ L G+DV+A AK G+GKTG + IP
Sbjct: 36 KGGGFQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIP 95
Query: 570 VLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
+ E++ + K +AL++ PTRELA+QT + +L K TD++ ++ GG ++ I
Sbjct: 96 LFEKLKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLKTILVLGGDSMDSQFAAI 155
Query: 744 YQNVQVIIATPGRMIDL 794
+ +I+ATPGR + L
Sbjct: 156 HTLPDIIVATPGRFLHL 172
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 110 bits (265), Expect = 4e-23
Identities = 54/130 (41%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Frame = +3
Query: 417 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK 596
L EL + + G+++P+PIQ +IP+AL G D+L +A GTGKTGA+ IP++E++ K
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGK 66
Query: 597 DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRD--DIMRIYQNVQVIIA 770
++AL++ PTRELA+Q + L K+ + V GGT+++ DI++ +NV ++I
Sbjct: 67 PDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQ-NKNVDILIG 125
Query: 771 TPGRMIDLMD 800
TPGR+ DL+D
Sbjct: 126 TPGRIKDLID 135
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 110 bits (265), Expect = 4e-23
Identities = 53/135 (39%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F++ LK LL I + G+E+PS IQ SIP+AL G D++ +A+ GTGKT A+ ++
Sbjct: 5 KFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIIN 64
Query: 579 QVD--PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
D KK + +ALI+ PTRELA+Q ++ + L KH + V+ GG + I +
Sbjct: 65 NADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNG 124
Query: 753 VQVIIATPGRMIDLM 797
V +++ TPGR++DL+
Sbjct: 125 VDIVVGTPGRVLDLI 139
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 110 bits (265), Expect = 4e-23
Identities = 63/189 (33%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Frame = +3
Query: 234 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEF 413
T+N+ +VG ++S +D G K+ +RR K N F+
Sbjct: 25 TDNQKDKHENVGENVSD---------EDDGNYIASKLLESNRRTKGKKGNGKASN-FQSM 74
Query: 414 CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP- 590
L + LL IF+KG++ P+PIQ +IP+ L G+DV+ A+ G+GKT A+ IP++E +
Sbjct: 75 GLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKST 134
Query: 591 -KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVII 767
+ALI+ P RELALQT ++ + +K TD+R + GG +L + + +++
Sbjct: 135 LANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVV 194
Query: 768 ATPGRMIDL 794
ATPGR + L
Sbjct: 195 ATPGRFLHL 203
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 110 bits (264), Expect = 5e-23
Identities = 56/135 (41%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 578
FEE + E+ I E G+E P P+QE IP L DV+A A+ GTGKT A+ +P+L+
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQ 63
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNV 755
Q+D K Q+LI+ PTREL LQ + + +K+ D ++V+ GG+++ I + + V
Sbjct: 64 QIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKRGV 123
Query: 756 QVIIATPGRMIDLMD 800
+I+ATPGR++DLM+
Sbjct: 124 HIIVATPGRLLDLME 138
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 110 bits (264), Expect = 5e-23
Identities = 52/134 (38%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 578
F E L +L + + + +P+PIQ +I AL+GKD++A A+ GTGKT A+ +P ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 579 -QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
+P++ ++ALI+ PTRELALQ ++ +++A+ T IR V GG N R + I
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 756 QVIIATPGRMIDLM 797
+++ATPGR+ D M
Sbjct: 124 NIVVATPGRLYDFM 137
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 110 bits (264), Expect = 5e-23
Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 578
F++ L LL I + G+E PS IQE +IP L+ +D++A A+ GTGKT A+ P+L+
Sbjct: 3 FDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLLQ 62
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNV 755
+D T Q LI+ PTREL LQ + AKH +RV+ GG+N+++ I +
Sbjct: 63 NIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRGA 122
Query: 756 QVIIATPGRMIDLM 797
Q+++ATPGRM D+M
Sbjct: 123 QIVVATPGRMQDMM 136
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 109 bits (263), Expect = 6e-23
Identities = 51/133 (38%), Positives = 84/133 (63%), Gaps = 1/133 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+ F LL + +KG+ PSPIQ+A+ P + G+D++ +A+ GTGKT A+ +P+LE+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 582 VDPKKDTIQALIVVPTRELALQTS-QICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
++ + T Q L++ PTRELA+Q + A H ++V+ GGT+ R I + + V
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVD 192
Query: 759 VIIATPGRMIDLM 797
V++ TPGR++D M
Sbjct: 193 VVVGTPGRVMDHM 205
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 109 bits (263), Expect = 6e-23
Identities = 54/131 (41%), Positives = 82/131 (62%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
EF++ L LL + + G+E P+PIQ+ +IP+ L G +++ +A GTGKT AY +PVL+
Sbjct: 3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
++ K Q LIV PTRELALQ + +L K+ +R + GG + I + Q V+
Sbjct: 63 RIQRGKKA-QVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVE 121
Query: 759 VIIATPGRMID 791
VI+ TPGR++D
Sbjct: 122 VIVGTPGRILD 132
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 109 bits (262), Expect = 8e-23
Identities = 52/132 (39%), Positives = 80/132 (60%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + +K E+L + E G+EKP+ IQEA +P A GKD++ +A+ GTGKT A+ IP+L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+D + IQ L++ PTRELA Q L K+T ++ + GG + + V +
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVNI 122
Query: 762 IIATPGRMIDLM 797
++ATPGR+ DL+
Sbjct: 123 VVATPGRLEDLL 134
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 109 bits (262), Expect = 8e-23
Identities = 45/133 (33%), Positives = 88/133 (66%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E + +E + + + G+ P+ IQ +IP LSG+DV+ +++ GTGKT A+ +P+LE+
Sbjct: 5 FPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILER 64
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+DP++ +QA+++ PTRELA+Q + ++ +R + GG ++ ++++ + V +
Sbjct: 65 LDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHI 124
Query: 762 IIATPGRMIDLMD 800
++ TPGR+IDL++
Sbjct: 125 VVGTPGRVIDLLE 137
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 109 bits (262), Expect = 8e-23
Identities = 56/134 (41%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE L + I +KG++ P+PIQ ++P+ LSG DV+A A+ G+GKT A+ IP+LE+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 582 VDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
+ + ++ALI+ PTR+LA QT + EL K TD+RV + GG ++ D + +
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 756 QVIIATPGRMIDLM 797
VIIATPGR++ L+
Sbjct: 150 DVIIATPGRLMHLL 163
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 109 bits (261), Expect = 1e-22
Identities = 54/134 (40%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+ F+E L + + + G+ PSPIQ A IP AL+GKDV+ +A+ GTGKT A+ IP+L
Sbjct: 44 DSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPIL 103
Query: 576 EQVDPKKD--TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
EQ+D +D QA+++VPTRELA Q + LA+ + V +GG N+ + ++
Sbjct: 104 EQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLEN 163
Query: 750 NVQVIIATPGRMID 791
Q+++ TPGR+ D
Sbjct: 164 GTQLVVGTPGRVHD 177
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 109 bits (261), Expect = 1e-22
Identities = 48/132 (36%), Positives = 84/132 (63%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F +F LK +L+ + + G+ +P+PIQE +IP+ L+G D++ +A+ GTGKT A+ +P+L
Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+D K +QAL++ PTRELA Q + V+V GG++ + + + + +V
Sbjct: 117 IDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGARV 176
Query: 762 IIATPGRMIDLM 797
++ TPGR++DL+
Sbjct: 177 VVGTPGRLLDLI 188
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 109 bits (261), Expect = 1e-22
Identities = 57/130 (43%), Positives = 83/130 (63%), Gaps = 3/130 (2%)
Frame = +3
Query: 417 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPK- 593
L R+L + GW+ P+ +QE IPI L+G+D L A G+GKTGA+ IP+LE++ +
Sbjct: 8 LSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLERMILRG 67
Query: 594 KDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVII 767
+DT ALI+ PTRELA QT+ + ELA T+ RV + GGT+ ++ +I+
Sbjct: 68 RDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLRTEPDIIV 127
Query: 768 ATPGRMIDLM 797
ATPGR+IDL+
Sbjct: 128 ATPGRLIDLV 137
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 109 bits (261), Expect = 1e-22
Identities = 50/133 (37%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 582 VDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+ + T I+AL+V PTRELALQT ++ EL + T +R GG + + I++N
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 759 VIIATPGRMIDLM 797
+++ATPGR++ ++
Sbjct: 146 ILLATPGRLLHVI 158
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 108 bits (260), Expect = 1e-22
Identities = 53/135 (39%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
NEF L ELL + E G+E +PIQ+ SIP+ L+GKD++ +AK G+GKT A+ +P+L
Sbjct: 47 NEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPIL 106
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQN 752
+++ + +QALI+ PTRELA Q +L + ++V+ TGG + R+ +
Sbjct: 107 NKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENG 166
Query: 753 VQVIIATPGRMIDLM 797
VQ+++ TPGR+ D +
Sbjct: 167 VQIVVGTPGRLADFV 181
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 108 bits (260), Expect = 1e-22
Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F++ LK+ +L I+ G++KP+PIQ S+ I L G+D L RAK GTGKT A+ IP L+
Sbjct: 6 QFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQ 65
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNV 755
+ + Q LI+ P REL Q SQ I+L K + RV TGG L + +
Sbjct: 66 HLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL-SGVKKSLHGA 124
Query: 756 QVIIATPGRMIDLMD 800
QVI ATPGR+ID+ +
Sbjct: 125 QVISATPGRLIDIKE 139
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 108 bits (260), Expect = 1e-22
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Frame = +3
Query: 384 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 560
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A GTGKT A+
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAF 202
Query: 561 CIPVLEQV--DPK-KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 731
+P+LE++ PK + L++VPTRELA+Q Q+ +L+ + V + GG +L+
Sbjct: 203 VLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQ 262
Query: 732 IMRIYQNVQVIIATPGRMID 791
+ V++ATPGR+ID
Sbjct: 263 EAALRSGPDVVVATPGRLID 282
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 108 bits (260), Expect = 1e-22
Identities = 55/141 (39%), Positives = 89/141 (63%)
Frame = +3
Query: 375 DVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTG 554
DVT T F+ L+ +LL GI+ G+EKPS IQ+ +I + G+DV+A++++GTGKT
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 555 AYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 734
+ I VL+ +D + QALI+ PTRELA+Q + + L + +++ GGTN+ +DI
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDI 150
Query: 735 MRIYQNVQVIIATPGRMIDLM 797
++ V+ TPGR+ D++
Sbjct: 151 RKLDYGQHVVAGTPGRVFDMI 171
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 108 bits (259), Expect = 2e-22
Identities = 53/132 (40%), Positives = 84/132 (63%), Gaps = 2/132 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + ++++L+ + P+P+QE SIP L GKD+LA A+ GTGKT A+ +P+++
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 582 VDPKK--DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
V KK T ALI+VPTRELA Q + A+HTD+R++ GGT++ ++ +
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGA 128
Query: 756 QVIIATPGRMID 791
++IATPGR++D
Sbjct: 129 DILIATPGRLLD 140
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 108 bits (259), Expect = 2e-22
Identities = 50/133 (37%), Positives = 85/133 (63%), Gaps = 1/133 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
+ + L E++ I +KG+ + +P+Q +IP + KDV+A+A GTGKT A+ IP++E
Sbjct: 14 YADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPMVEH 73
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNVQ 758
+DP+ D +QAL++ PTRELALQ +L + + +R + GG + I + ++ Q
Sbjct: 74 IDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQITTLKKHPQ 133
Query: 759 VIIATPGRMIDLM 797
+++ATPGR++D M
Sbjct: 134 IVVATPGRLMDHM 146
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 108 bits (259), Expect = 2e-22
Identities = 53/154 (34%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Frame = +3
Query: 351 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 530
KD + ++ + +F +F + + L G+ + G+ P+ IQ+ IP+ALSG+DVL A
Sbjct: 35 KDLEDRCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAA 94
Query: 531 KNGTGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVM 698
K G+GKT A+ IP++E + +K D + AL++ PTRELA QT ++ +++ D+
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAG 154
Query: 699 VTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 800
+ GG +L+++ RI +++ TPGR++ MD
Sbjct: 155 LIIGGKDLKNEQKRI-MKTNIVVCTPGRLLQHMD 187
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 108 bits (259), Expect = 2e-22
Identities = 50/131 (38%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + LK +L + + G+EKPSPIQ IP L+G+DVL A+ G+GKT A+ +P+L+
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+DP+ Q L++ PTRELA+Q ++ + +KH + V+ GG + + Q Q
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQ 127
Query: 759 VIIATPGRMID 791
+++ TPGR++D
Sbjct: 128 IVVGTPGRLLD 138
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 107 bits (258), Expect = 2e-22
Identities = 49/136 (36%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+ F++ LK LL GI+ G+EKPS IQ+ +I + G DV+A+A++GTGKT + I +L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
+Q++ + QAL++ PTRELA Q ++ + L + GGTN+R+++ ++
Sbjct: 93 QQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEA 152
Query: 756 -QVIIATPGRMIDLMD 800
+++ TPGR+ D+++
Sbjct: 153 PHIVVGTPGRVFDMLN 168
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 107 bits (258), Expect = 2e-22
Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 4/172 (2%)
Frame = +3
Query: 288 KGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKP 467
KG D ID+ + K + + F L R +L G+ G+ KP
Sbjct: 195 KGGKDDEIDEEDDSEEAKADFYAPETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKP 254
Query: 468 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTREL 638
SPIQ A+IPIAL GKD++A A G+GKT A+ IP++E++ P K + + ++++PTREL
Sbjct: 255 SPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTREL 314
Query: 639 ALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMID 791
A+Q + + ++A+ + I + GG NLR + ++IATPGR ID
Sbjct: 315 AIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFID 366
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 107 bits (257), Expect = 3e-22
Identities = 52/142 (36%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Frame = +3
Query: 387 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG-KDVLARAKNGTGKTGAYC 563
T + FE F L ++ + + G+ P+PIQ ++PI L+G D + A GTGKT A+
Sbjct: 41 TTVDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFG 100
Query: 564 IPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
IP++E +D QAL++ PTRELALQ ++ L K +RV+ GG + R I I
Sbjct: 101 IPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGI 160
Query: 744 YQNVQVIIATPGRMIDLMDXQV 809
+ +++ATPGR++D ++ ++
Sbjct: 161 KRGAHIVVATPGRLVDFLEQKM 182
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 107 bits (257), Expect = 3e-22
Identities = 54/140 (38%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 582 VD----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ K I+AL++ PTRELA Q S+ K+ +R V GG + I ++
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRH 122
Query: 750 NVQVIIATPGRMIDLMDXQV 809
V V++ATPGR++DL+ V
Sbjct: 123 GVDVLVATPGRLLDLVQQNV 142
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 107 bits (256), Expect = 4e-22
Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 6/162 (3%)
Frame = +3
Query: 342 IPPKDRRIKTSDVTDTRGNE--FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKD 515
+ KD S++ + N FE+ L E + I E G+ P+PIQ +IP L GKD
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 516 VLARAKNGTGKTGAYCIPVLE----QVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 683
++A A+ GTGKT A+ +P++E + PK+ + +L++ PTRELA Q K+
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 684 DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDXQV 809
+R GG ++R + R+ V +++ATPGR++DL++ ++
Sbjct: 124 ALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKM 165
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 107 bits (256), Expect = 4e-22
Identities = 52/134 (38%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L LL + E G+E PSPIQ A+IP+ L+ +DVL +A+ GTGKT ++ +P+L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+D K+ T QAL++ PTRELA+Q ++ A + V+ GG + + + + V
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVH 128
Query: 759 VIIATPGRMIDLMD 800
V++ TPGR+ID ++
Sbjct: 129 VVVGTPGRVIDHLE 142
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 107 bits (256), Expect = 4e-22
Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 20/207 (9%)
Frame = +3
Query: 240 NRISSSNHVGNSI--SQTKGEVDKSIDDVGWKSK-LK-IPPKDRRIKTSDVT-DTRGN-- 398
N +++N++ N+ S G+ + D W K LK + +D I D T+G
Sbjct: 349 NNNNNNNNINNNNNGSMIGGKQISELPDTHWSKKPLKSMTKRDWHIFKEDFNISTKGGIA 408
Query: 399 -----EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 563
++E L RE+L I + G+EKPSPIQ SIPI+L+G+D+L A+ G+GKT A+
Sbjct: 409 PNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFV 468
Query: 564 IPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 719
IP+L + D + D AL++ PTREL Q + A+H RV+ GG +
Sbjct: 469 IPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQS 528
Query: 720 LRDDIMRIYQNVQVIIATPGRMIDLMD 800
+ D ++ + ++IIATPGR+ D ++
Sbjct: 529 IEDQAYQVSKGCEIIIATPGRLNDCLE 555
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 107 bits (256), Expect = 4e-22
Identities = 51/131 (38%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLE 578
F+ L E+L + +KG+ P+PIQE +IPI + GK D++ +A+ GTGKT A+ IP+LE
Sbjct: 4 FKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+D QALI+ PTRELA+Q ++ + + V GG ++ I + + VQ
Sbjct: 64 TIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGVQ 123
Query: 759 VIIATPGRMID 791
+++ TPGR++D
Sbjct: 124 IVVGTPGRILD 134
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 107 bits (256), Expect = 4e-22
Identities = 49/137 (35%), Positives = 88/137 (64%), Gaps = 6/137 (4%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+ L ++L + E+G+ +P+PIQ+ +IP L G+D++A A+ GTGKT + +P+L+
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 582 VDPK------KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
+ + + ++ALI+ PTRELA Q + + +K+ +IR +V GG ++ +M++
Sbjct: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122
Query: 744 YQNVQVIIATPGRMIDL 794
V V++ATPGR++DL
Sbjct: 123 RGGVDVLVATPGRLLDL 139
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 107 bits (256), Expect = 4e-22
Identities = 58/144 (40%), Positives = 87/144 (60%), Gaps = 3/144 (2%)
Frame = +3
Query: 369 TSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGK 548
T D + F E L R LL G++KP+PIQ A IP+AL+G+D+ A A G+GK
Sbjct: 158 TVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGK 217
Query: 549 TGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 719
T A+ +P LE++ PK+ + LI+ PTRELA+Q + LA+ TDI+ + GG +
Sbjct: 218 TAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLS 277
Query: 720 LRDDIMRIYQNVQVIIATPGRMID 791
+R+ + + +++ATPGRMID
Sbjct: 278 VREQEVVLRSMPDIVVATPGRMID 301
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 107 bits (256), Expect = 4e-22
Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L +L + + G+E PSPIQ++ IP L+G DVL A+ G+GKT A+ +P+L Q
Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQ 66
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNVQ 758
+DP + Q L++ PTRELA+Q + C K+ R++ GG + + Q Q
Sbjct: 67 IDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQ 126
Query: 759 VIIATPGRMID 791
V++ TPGR++D
Sbjct: 127 VVVGTPGRILD 137
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 106 bits (255), Expect = 6e-22
Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 8/141 (5%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L E+L + ++G+ P+PIQ IP L+GKDV+A A+ GTGKT + +P+L +
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66
Query: 582 --------VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 737
V P + ++ALI+ PTRELA+Q + + K+ +R V GG N+ I
Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIA 126
Query: 738 RIYQNVQVIIATPGRMIDLMD 800
+ V++++ATPGR++DL++
Sbjct: 127 ALQAGVEILVATPGRLLDLVE 147
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 106 bits (255), Expect = 6e-22
Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F L LL + E G+ +P+PIQ +IP A+SG+DV+A A G+GKT A+ +P+L Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 582 -VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+D + T +AL++ PTRELA Q + +LA HT I GG ++R + V
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 759 VIIATPGRMID 791
V+I TPGR++D
Sbjct: 123 VLIGTPGRLLD 133
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 106 bits (255), Expect = 6e-22
Identities = 49/138 (35%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+ F E L EL + G+E+P+PIQ +IP+ L G D+LA A+ GTGKT ++ +P++
Sbjct: 4 SSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPII 63
Query: 576 EQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
E++ ++AL++ PTRELA+Q + +E + +RV+ GG + + I R+
Sbjct: 64 EKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRL 123
Query: 744 YQNVQVIIATPGRMIDLM 797
+ +++ATPGR++DL+
Sbjct: 124 KRGTDILVATPGRLLDLL 141
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 106 bits (255), Expect = 6e-22
Identities = 55/134 (41%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F++ LK +LL+G+ + G+E PS IQE IP+A++ KD+LAR+KNGTGKT ++ IP+L+
Sbjct: 16 KFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQ 75
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNV 755
+ + I+++I+VPTRELALQ S + +L+K+ +I + VT G + + D I +
Sbjct: 76 NIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQVT--GVDSKIDKNNI--DF 131
Query: 756 QVIIATPGRMIDLM 797
+++ TPG++ D +
Sbjct: 132 NILLGTPGKIYDCL 145
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 106 bits (255), Expect = 6e-22
Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Frame = +3
Query: 381 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 560
T + F+ L LL I KG+ P+PIQ SIP+ L +DV+ A+ G+GKT A+
Sbjct: 85 TGKKSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAF 144
Query: 561 CIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 734
IP++E++ + +ALI+ P+RELALQT ++ E K TD++ ++ GG +L D
Sbjct: 145 VIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLEDQF 204
Query: 735 MRIYQNVQVIIATPGRMIDL 794
+ N +IIATPGR + L
Sbjct: 205 GFMTTNPDIIIATPGRFLHL 224
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 106 bits (254), Expect = 8e-22
Identities = 53/135 (39%), Positives = 85/135 (62%), Gaps = 3/135 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE L +L + ++G+ P+PIQE SIPI L GKD+L A+ GTGKT A+ IP+L++
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQK 62
Query: 582 V---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ D +K I+AL++ PTRELA+Q + ++T ++ V GG + +
Sbjct: 63 LYKTDHRKG-IKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 753 VQVIIATPGRMIDLM 797
+Q+++ATPGR++DL+
Sbjct: 122 IQILVATPGRLLDLI 136
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 106 bits (254), Expect = 8e-22
Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLE 578
FE L + LL G+ + G+E P+ IQ+ SIPI L D + A+ GTGKT A+ +P+L+
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQNV 755
+D +QALI+ PTRELA Q +++KH + V+ GG N+ + I I +
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIRRGA 134
Query: 756 QVIIATPGRMIDLM 797
Q+I+ATPGR++DLM
Sbjct: 135 QIIVATPGRLMDLM 148
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 106 bits (254), Expect = 8e-22
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 582 VD----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ K I+AL++ PTRELA Q S+ K+ +R V GG + I ++
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRH 122
Query: 750 NVQVIIATPGRMIDL 794
V V++ATPGR++DL
Sbjct: 123 GVDVLVATPGRLLDL 137
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 106 bits (254), Expect = 8e-22
Identities = 57/147 (38%), Positives = 86/147 (58%), Gaps = 7/147 (4%)
Frame = +3
Query: 372 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKT 551
S T+ + F F L R +L + + KP+PIQ +IPIAL+GKD++A A G+GKT
Sbjct: 325 SKSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKT 384
Query: 552 GAYCIPVLEQV-------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 710
A+ IP +E++ P + + LI+ PTRELA+Q + +AK TDIR + G
Sbjct: 385 AAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVG 444
Query: 711 GTNLRDDIMRIYQNVQVIIATPGRMID 791
G +++ + +V+IATPGR+ID
Sbjct: 445 GLSVKSQEAELKLRPEVVIATPGRLID 471
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 106 bits (254), Expect = 8e-22
Identities = 52/128 (40%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Frame = +3
Query: 417 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE--QVDP 590
L + +L I KG+++P+PIQ +IP+ L GKDV+ A+ G+GKT A+ +P+LE +V
Sbjct: 109 LSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKVHS 168
Query: 591 KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIA 770
K +A+I+ P+RELALQT ++ + + TD+R+ + GG +L + + N +IIA
Sbjct: 169 AKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFKMMMSNPDIIIA 228
Query: 771 TPGRMIDL 794
TPGR + L
Sbjct: 229 TPGRFLHL 236
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 106 bits (254), Expect = 8e-22
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Frame = +3
Query: 300 DKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQ 479
D DD + + + + + +G F+ L LL I +KG++ P+PIQ
Sbjct: 46 DDGSDDEAFIAAKQAAANRKNANAPGKSGKKGGGFQAMGLNVALLKAIAQKGFKIPTPIQ 105
Query: 480 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQA--LIVVPTRELALQTS 653
++P+ L G DV+ A+ G+GKT A+ IP++E++ + A +I+ P+RELALQT
Sbjct: 106 RKAVPLILQGDDVVGMARTGSGKTAAFVIPMIERLKTHSAKVGARGVIMSPSRELALQTL 165
Query: 654 QICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDL 794
++ E + TD+R ++ GG +L + + N +IIATPGR + L
Sbjct: 166 KVVKEFGRGTDLRTILLVGGDSLEEQFNSMTTNPDIIIATPGRFLHL 212
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 105 bits (253), Expect = 1e-21
Identities = 49/130 (37%), Positives = 80/130 (61%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE+F L ++L + G+ PS +Q IP L G++++ R+K G+GKT ++ IP+ E
Sbjct: 5 FEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCEN 64
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
++ + IQALIVVPTRELALQ ++ + +R G +++D I + Q V +
Sbjct: 65 INVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHI 124
Query: 762 IIATPGRMID 791
++ATPGR++D
Sbjct: 125 VVATPGRILD 134
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 105 bits (253), Expect = 1e-21
Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+FE F E+L I E G++ +P+Q+ +IP G+DVLA A+ GTGKT A+ +P+L+
Sbjct: 2 KFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQ 61
Query: 579 QVDPKKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
++ + T+Q ALI+ PTRELA Q + +KH +I V+ GG + ++
Sbjct: 62 KMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKL 121
Query: 744 YQNVQVIIATPGRMID 791
Q +I+ATPGR+++
Sbjct: 122 KQGADIIVATPGRLLE 137
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 105 bits (253), Expect = 1e-21
Identities = 52/133 (39%), Positives = 85/133 (63%), Gaps = 2/133 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+ L EL+ GI ++G++ P+PIQ +IP+ L G+DV+A AK G+GKT + IP+ E+
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 582 VDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
+ ++ T +ALI+ PTRELA+QT + EL + +++ ++ GG ++ I+
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 756 QVIIATPGRMIDL 794
VI+ATPGR + L
Sbjct: 161 DVIVATPGRFLHL 173
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 105 bits (253), Expect = 1e-21
Identities = 50/130 (38%), Positives = 85/130 (65%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+E + + + G+++P+PIQ+ SIP AL G D+L +A+ GTGKTGA+ IP++E+
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
V K+ +Q+LI+ PTRELA+Q ++ E ++ ++V+ GG + I + + Q+
Sbjct: 64 VVGKQG-VQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 762 IIATPGRMID 791
++ TPGR+ID
Sbjct: 123 VVGTPGRVID 132
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 105 bits (252), Expect = 1e-21
Identities = 49/132 (37%), Positives = 87/132 (65%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N+F + + E+ + + +P+P+Q +IP L+ +DV+A+A+ GTGKT A+ +P+L
Sbjct: 3 NKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPIL 62
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
E+V+ +K TIQALI+ PTRELA+Q + +LA+ I ++ GG ++ + ++ ++
Sbjct: 63 ERVNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSI 122
Query: 756 QVIIATPGRMID 791
+II TPGR++D
Sbjct: 123 HIIIGTPGRLLD 134
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 105 bits (252), Expect = 1e-21
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Frame = +3
Query: 300 DKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQ 479
D DD + ++ + + T +G F+ L LL I KG+ P+PIQ
Sbjct: 59 DSDEDDEAFIAEKQTSANRKSANLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQ 118
Query: 480 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTS 653
+IP+ + +DV+ A+ G+GKT A+ IP++E++ K + LI+ P+RELALQT
Sbjct: 119 RKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTL 178
Query: 654 QICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDL 794
++ EL K TD++ ++ GG +L + + N ++IATPGR + L
Sbjct: 179 KVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATPGRFLHL 225
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 105 bits (251), Expect = 2e-21
Identities = 49/132 (37%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE L E+ G+ KG+ P+PIQ ++P+ L+G D+ A A+ G+GKT A+ +P++++
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 582 VDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ + D I+ALI+ PTR+LA QT + +L K TD+++ + GG ++ + +N
Sbjct: 111 L-RRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAEN 169
Query: 753 VQVIIATPGRMI 788
+IIATPGR++
Sbjct: 170 PDIIIATPGRLV 181
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 105 bits (251), Expect = 2e-21
Identities = 52/133 (39%), Positives = 84/133 (63%), Gaps = 3/133 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++ L R LL I G+++P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279
Query: 582 V--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ P++ + + L++VPTREL +Q + +LA+ +I + GG +++ +
Sbjct: 280 LIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAA 339
Query: 753 VQVIIATPGRMID 791
++IATPGR+ID
Sbjct: 340 PDILIATPGRLID 352
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 105 bits (251), Expect = 2e-21
Identities = 52/133 (39%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+ L LL I KG+ P+PIQ +IP+ L +DV+ A+ G+GKT A+ IP++E+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 582 VDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
+ + +A+I+ P+RELALQT ++ EL K TD++ ++ GG +L + + N
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANP 207
Query: 756 QVIIATPGRMIDL 794
+IIATPGR + L
Sbjct: 208 DIIIATPGRFLHL 220
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 104 bits (250), Expect = 2e-21
Identities = 52/133 (39%), Positives = 83/133 (62%), Gaps = 3/133 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++ L R LL I + +P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 582 V--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ P++ + + L++VPTREL +Q + +LA+ T++ + GG +++ +
Sbjct: 243 LIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEAALRSG 302
Query: 753 VQVIIATPGRMID 791
V+IATPGR+ID
Sbjct: 303 PDVLIATPGRLID 315
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 104 bits (250), Expect = 2e-21
Identities = 51/136 (37%), Positives = 85/136 (62%), Gaps = 3/136 (2%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
EF++F LK E+L + +G P+PIQ A++P+AL GKD++ +A+ GTGKT A+ +P+ E
Sbjct: 2 EFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAE 61
Query: 579 QVDPKKD---TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
++ P ++ +AL++ PTRELALQ + +A H ++V+ GGT + +
Sbjct: 62 RLAPSQERGRKPRALVLTPTRELALQVASELTAVAPH--LKVVAVYGGTGYGKQKEALLR 119
Query: 750 NVQVIIATPGRMIDLM 797
++ATPGR +D +
Sbjct: 120 GADAVVATPGRALDYL 135
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 104 bits (250), Expect = 2e-21
Identities = 51/134 (38%), Positives = 85/134 (63%), Gaps = 1/134 (0%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F +F LK + + E G+++PSP+Q+ +IP+ L G D++A+A+ GTGKT A+ +P++
Sbjct: 2 KFTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMS 61
Query: 579 QVDPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
+ K D +++ L++VPTRELA+Q S K + ++ GGT I RI Q
Sbjct: 62 MM--KADGSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQ-A 118
Query: 756 QVIIATPGRMIDLM 797
+++ATPGR+ DL+
Sbjct: 119 SIVVATPGRLQDLL 132
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 104 bits (249), Expect = 3e-21
Identities = 45/130 (34%), Positives = 80/130 (61%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++ L + + + E+G+ P+P+Q + A+ GKD++ R+K GTGKT A+ +P+LE+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+ + ++ALI+ PTRELALQ + LAKH +++ GG +++ + + +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 762 IIATPGRMID 791
I+ TPGR+ D
Sbjct: 151 IVGTPGRVFD 160
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 104 bits (249), Expect = 3e-21
Identities = 53/132 (40%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FEE L R+LL I E G+ +P+ IQ +IP L+G D++ A+ GTGKT AY +P+L +
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 582 VD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+ + +A+I PTREL +Q +LAK+TD+R++ GG + + + V
Sbjct: 67 IKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEHLQKGVD 126
Query: 759 VIIATPGRMIDL 794
+I+ATPGR +DL
Sbjct: 127 IIVATPGRFLDL 138
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 104 bits (249), Expect = 3e-21
Identities = 53/133 (39%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F F L +L I + GW +P+ +Q ASIP AL GKD+L A+ G+GKT AY +P L +
Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61
Query: 582 V---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
V K I+ L++VPTRELA Q + C L + T ++ ++ GG + + +N
Sbjct: 62 VLSERKPKAGIRVLVMVPTRELAQQVMKDCEALTQQTGLKTVIIRGGQEFQYQASLLRRN 121
Query: 753 VQVIIATPGRMID 791
+++IATPGRM +
Sbjct: 122 PEIVIATPGRMTE 134
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 104 bits (249), Expect = 3e-21
Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
+ + L E+ + + +PSPIQ A IP+AL G+DVL +A+ GTGKT A+ IP++E+
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 582 VD--PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
++ P QALI+ PTRELA+Q +L I V+ GG LR + ++ +
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAP 125
Query: 756 QVIIATPGRMIDLM 797
+++ TPGR+IDLM
Sbjct: 126 HIVVGTPGRVIDLM 139
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 104 bits (249), Expect = 3e-21
Identities = 52/135 (38%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F++ + E+ + + G+E+ SPIQ +IP L+ KDV +A+ GTGKT A+ IP+LE
Sbjct: 5 KFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLE 64
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNV 755
+D + + +QA+I+ PTRELA+Q ++ +L+ + I V+ GG + I + + V
Sbjct: 65 NIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGV 124
Query: 756 QVIIATPGRMIDLMD 800
Q+II TPGR++D +D
Sbjct: 125 QIIIGTPGRVMDHID 139
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 103 bits (248), Expect = 4e-21
Identities = 55/144 (38%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
Frame = +3
Query: 372 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKT 551
+D DT F L E+L + + G+ P+PIQ A+IP L +DV+ A+ GTGKT
Sbjct: 37 ADEEDTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 552 GAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRD 728
A+ +P+L VD + +QAL++ PTRELA+Q++Q + A T + V+ GG+
Sbjct: 97 AAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGP 156
Query: 729 DIMRIYQNVQVIIATPGRMIDLMD 800
I + + QV++ TPGR+IDL++
Sbjct: 157 QIGALKRGAQVVVGTPGRVIDLIE 180
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 103 bits (248), Expect = 4e-21
Identities = 46/115 (40%), Positives = 75/115 (65%)
Frame = +3
Query: 453 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 632
G+ P+PIQE +IP+ L GKD++A + GTGKT AY IP+L ++DP+ +QA+I+ P+
Sbjct: 29 GFTAPTPIQEEAIPLILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSH 88
Query: 633 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLM 797
ELA+Q Q + K +I GG N++ I + + Q+I+AT GR+++++
Sbjct: 89 ELAMQIHQTIEKWTKDNNISSEPLIGGANIKRQIENLKKRPQIIVATTGRLLEVI 143
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 103 bits (248), Expect = 4e-21
Identities = 49/134 (36%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+ F ++ GI + G+ P+PIQE IP AL G+DV+ A+ GTGKT A+ +P+L++
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQR 62
Query: 582 -VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+ + ++A+IV PTRELA Q + L K+T +R + GG + I R+ + V+
Sbjct: 63 LMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVE 122
Query: 759 VIIATPGRMIDLMD 800
+ + PGR++D ++
Sbjct: 123 IAVVCPGRLLDHLE 136
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 103 bits (248), Expect = 4e-21
Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L LL + G+E P+PIQ +I L G DVL A+ GTGKT A+ +P+L +
Sbjct: 7 FADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSR 66
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNVQ 758
+D K+ QAL++ PTRELA+Q ++ A+ D V+ GG ++R+ + + QN Q
Sbjct: 67 IDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNPQ 126
Query: 759 VIIATPGRMID 791
VI+ TPGR++D
Sbjct: 127 VIVGTPGRVMD 137
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 103 bits (248), Expect = 4e-21
Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 10/158 (6%)
Frame = +3
Query: 348 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 527
P +KTSD ++ F++F L L I + G+E + +QEA++PI L GKDVLA+
Sbjct: 367 PTGEHVKTSDSYLSK-TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAK 425
Query: 528 AKNGTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAK-H 680
AK GTGKT A+ +P +E V D ++ I L+V PTRELA Q + L K H
Sbjct: 426 AKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYH 485
Query: 681 TDIRVMVTTGGTNLRDDIMRIYQN-VQVIIATPGRMID 791
I V V GGT L + R+ N Q+++ATPGR+ D
Sbjct: 486 PSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKD 523
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 103 bits (248), Expect = 4e-21
Identities = 51/140 (36%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Frame = +3
Query: 381 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 560
T + F F L + +L I KG+ +P+PIQ +IP+ L +D++ A+ G+GKT A+
Sbjct: 132 TKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAF 191
Query: 561 CIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDI 734
+P++E++ I +A+I+ P+RELA+QT + + A+ T++R ++ TGG +L +
Sbjct: 192 ILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQF 251
Query: 735 MRIYQNVQVIIATPGRMIDL 794
+ N VIIATPGR + L
Sbjct: 252 GMMMTNPDVIIATPGRFLHL 271
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 103 bits (247), Expect = 5e-21
Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E L+ ELL + G+E+P+PIQ ++P ++G+D+L +A GTGKT A+ +P+L +
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHR 118
Query: 582 VDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ + QAL++VPTRELA+Q S+ + RV+ GG + + + Q
Sbjct: 119 LTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQG 178
Query: 753 VQVIIATPGRMIDLM 797
V V++ATPGR +D M
Sbjct: 179 VDVVVATPGRALDHM 193
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 103 bits (247), Expect = 5e-21
Identities = 54/138 (39%), Positives = 84/138 (60%), Gaps = 5/138 (3%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+ F L L + P+PIQE +IP AL+G+D+L A+ GTGKT A+ +P+L
Sbjct: 6 FDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLHH 65
Query: 582 V-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 746
+ P T +ALI+ PTRELA+Q ++ +L++ T I V GG ++R I +
Sbjct: 66 LMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQALA 125
Query: 747 QNVQVIIATPGRMIDLMD 800
+ V +++ATPGR++DLM+
Sbjct: 126 RGVDILVATPGRLLDLME 143
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 103 bits (247), Expect = 5e-21
Identities = 58/149 (38%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Frame = +3
Query: 366 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 545
++SDV + FEE L R LL G+ + P+ IQ A+IP+AL+ D++ ++K+GTG
Sbjct: 15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTG 74
Query: 546 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK-HTDIRVMVTTGGTNL 722
KT Y I V++ +P + A+IVVPTRELA+Q L K D + GGT++
Sbjct: 75 KTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDV 134
Query: 723 RDDIMRIYQNVQVIIATPGRMIDLMDXQV 809
D R+ ++ +VII TPGR++ L + +V
Sbjct: 135 AKDRKRMNES-RVIIGTPGRLLHLYENRV 162
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 103 bits (247), Expect = 5e-21
Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Frame = +3
Query: 240 NRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCL 419
N+ S+ + + + E + DD+G + ++++K + + +++ L
Sbjct: 141 NKASNDKVLKMAKEKLDNESEHEDDDMGTQINQNA---NKKLKEQKLNKKKKKTWQDLGL 197
Query: 420 KRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPK 593
+ LL + E +E P+ IQ +IP AL GKD+LA + G+GKT A+ IP+L++ P
Sbjct: 198 IKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQKFYRSPF 257
Query: 594 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAT 773
+ +ALIV PTRELA Q ++ +L K+T +R + G + ++ + N +VIIAT
Sbjct: 258 TNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAELRGNPEVIIAT 317
Query: 774 PGRMID 791
PGR+ID
Sbjct: 318 PGRLID 323
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 103 bits (247), Expect = 5e-21
Identities = 64/171 (37%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Frame = +3
Query: 321 GWKSKLKIPPKDRRIKTSDVTDTRG-------NEFEEFCLKRELLMGIFEKGWEKPSPIQ 479
G K + K KD + + +T+ + F +F L ++ L G+ + + KP+ IQ
Sbjct: 30 GGKPRFKFSMKDEESEIARLTELYATAKIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQ 89
Query: 480 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD----PKKDTIQALIVVPTRELALQ 647
SI AL GKD+LA AK G+GKT A+ IPV E++ K D + ALI+ PTRELALQ
Sbjct: 90 RESILPALQGKDILAAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQ 149
Query: 648 TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 800
+ ++ K D + GG NL+ + R++Q + +II TPGR++ MD
Sbjct: 150 IFETVAKIGKLHDFTTGLIIGGQNLKAEKNRLHQ-LNIIICTPGRLLQHMD 199
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 103 bits (246), Expect = 7e-21
Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++ L E++ I G+ + +PIQE +IPI ++GKD+ +A+ GTGKT A+ IP +E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAK----HTDIRVMVTTGGTNLRDDIMRIYQ 749
VD + Q+LI+ PTRELAL Q+C EL K +RV+ GG ++ I +
Sbjct: 63 VDISINQTQSLILCPTRELAL---QVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKA 119
Query: 750 NVQVIIATPGRMIDLMD 800
+++ TPGR+ID +D
Sbjct: 120 GAHIVVGTPGRIIDHLD 136
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 103 bits (246), Expect = 7e-21
Identities = 53/140 (37%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPV 572
N+FE+ L LL I + G+E P+ +QE +IP+ L D++A A+ GTGKT A+ PV
Sbjct: 2 NKFEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPV 61
Query: 573 LEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQ 749
++++D QALI+ PTREL LQ + +K+ I V+ GG ++ + I +
Sbjct: 62 IQKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKR 121
Query: 750 NVQVIIATPGRMIDLMDXQV 809
Q+I+ATPGRM D+++ ++
Sbjct: 122 GAQIIVATPGRMQDMINRRL 141
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 103 bits (246), Expect = 7e-21
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+E L R L G++KP+PIQ A IPIA++G+DV RA G+GKT A+ +P LE+
Sbjct: 150 FDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLER 209
Query: 582 V---DPK-KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ P+ L++VPTRELA+Q Q+ LA+ T IR ++ GG + +
Sbjct: 210 MLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGGLSANVQAAALRT 269
Query: 750 NVQVIIATPGRMID 791
++++ATPGR+ID
Sbjct: 270 RPEIVVATPGRVID 283
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 103 bits (246), Expect = 7e-21
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Frame = +3
Query: 390 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 569
+G FE L + I +G+ P+PIQ +IP+ L G+DV+A ++ G+GKT A+ IP
Sbjct: 297 KGGGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIP 356
Query: 570 VLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
++ ++ + +ALIVVPTRELALQ + + K TD+ + GG L +
Sbjct: 357 LINKLQNHSRIVGARALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGLEGQFESL 416
Query: 744 YQNVQVIIATPGRMIDLMD 800
N +IIATPGR+ L+D
Sbjct: 417 ASNPDIIIATPGRLSQLID 435
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 102 bits (245), Expect = 9e-21
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N F + L ++ + G++ P PIQ IP+ L G D+L A G+GKT A+ +P+L
Sbjct: 6 NSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLL 65
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD--IRVMVTTGGTNLRDDIMRIYQ 749
+ +D K+ +Q LI+VPTRELA+Q +C+ K I + V GG N R + +
Sbjct: 66 QNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQFNDLKK 125
Query: 750 NVQVIIATPGRMID 791
N +II TPGR++D
Sbjct: 126 NPHIIIGTPGRLLD 139
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 102 bits (245), Expect = 9e-21
Identities = 48/134 (35%), Positives = 87/134 (64%), Gaps = 2/134 (1%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N F +F + +L + KG++ P+PIQ+A+IP + G+D+L +A+ GTGKT A+ +P++
Sbjct: 51 NGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLI 110
Query: 576 EQV-DPKKDTIQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNLRDDIMRIYQ 749
E++ D K+ + L++ PTRELA Q ++ ++ T+ + + GGT+ R+ I + +
Sbjct: 111 EKLADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKR 170
Query: 750 NVQVIIATPGRMID 791
V V++ TPGR++D
Sbjct: 171 KVDVVVGTPGRIMD 184
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 102 bits (245), Expect = 9e-21
Identities = 51/134 (38%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
EF E L + L + + + KP+ +Q +IP L+GKD++ AK G+GKT A+ +P+L
Sbjct: 2 EFSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLH 61
Query: 579 QV--DPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ DP+ +T +ALI++PTRELALQT + + A +T I+V + GG + + + +
Sbjct: 62 KFLNDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATVRK 121
Query: 750 NVQVIIATPGRMID 791
N +V++ATPGR+++
Sbjct: 122 NPEVLVATPGRLVE 135
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 102 bits (245), Expect = 9e-21
Identities = 50/143 (34%), Positives = 84/143 (58%)
Frame = +3
Query: 363 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 542
++ D D FE+ + EL E GW++P+ IQ +IPIALSGKD++ A+ G+
Sbjct: 30 VEEDDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGS 89
Query: 543 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 722
GKT A+ IP+L+++ K + +LI+ PTREL+LQ + I L + V + GG ++
Sbjct: 90 GKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDM 149
Query: 723 RDDIMRIYQNVQVIIATPGRMID 791
+++ + +I+ +PGR+ D
Sbjct: 150 VSQALQLSKKPHIIVGSPGRIAD 172
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 102 bits (244), Expect = 1e-20
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Frame = +3
Query: 243 RISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTD----TRGNEFEE 410
+I G+ + E D D + K K K+ + + + D+ D T +
Sbjct: 97 QIKEEEDAGDDVGLFVSEEDLKKDAIKTKEK-KVKKEKAKAEDQDLIDFEECTNYDTLAT 155
Query: 411 FC---LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F L R LL + + P+PIQ A+IP+AL G+D+ A GTGKT AY +P LE+
Sbjct: 156 FYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLER 215
Query: 582 V--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ P + + L++VPTREL +Q Q+ +L++ T + V ++ GG +++ + +N
Sbjct: 216 LLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGGLDVKVQESVLRKN 275
Query: 753 VQVIIATPGRMID 791
++IATPGR+ID
Sbjct: 276 PDIVIATPGRLID 288
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 101 bits (243), Expect = 2e-20
Identities = 49/136 (36%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+ F F L + + + PSPIQ +IP+ L G+D +A A+ GTGKT A+ +P+L
Sbjct: 6 SNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPIL 65
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQN 752
+ + P+ T QALI+ PTRELA+Q ++ L+K+ ++ + V GG + ++
Sbjct: 66 QNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSG 125
Query: 753 VQVIIATPGRMIDLMD 800
QV++ TPGR++D +D
Sbjct: 126 AQVVVGTPGRILDHID 141
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 101 bits (243), Expect = 2e-20
Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F L LL I E+G+E+PSPIQE SIP L GKDVL A+ GTGKT A+ +P+L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+ Q L++ PTRELA Q + +KH ++++V GG++ + Q Q
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 759 VIIATPGRMID 791
++ TPGR++D
Sbjct: 128 WVVGTPGRVMD 138
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 101 bits (243), Expect = 2e-20
Identities = 46/132 (34%), Positives = 80/132 (60%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N+F ++ L E++ + + +P+PIQE IP+AL GKD++A++K G+GKT A+ IP+
Sbjct: 4 NKFTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPIC 63
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
E + +++ QAL++ PTRELA Q + + ++V V GG + + Q
Sbjct: 64 ESIVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKS 123
Query: 756 QVIIATPGRMID 791
+++ TPGR++D
Sbjct: 124 HIVVGTPGRVLD 135
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 101 bits (243), Expect = 2e-20
Identities = 52/136 (38%), Positives = 77/136 (56%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F L ++ + EKG+E + IQE SI L G+D+L + G+GKTGA+ IP++E
Sbjct: 57 FASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIEH 116
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
ALIV PTRELALQ Q L+K + GGTN+ D+ + + + V
Sbjct: 117 ALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLHV 176
Query: 762 IIATPGRMIDLMDXQV 809
I+ TPGR++DL + ++
Sbjct: 177 IVGTPGRLLDLTNRKL 192
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 101 bits (243), Expect = 2e-20
Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 4/133 (3%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E L LL + +KG+ +P+ IQ A+IP AL G+DVL A GTGKT AY +P L+
Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65
Query: 582 V--DPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ P+K + + LI+ PTRELA+Q S ELAKHT + + TGG + +
Sbjct: 66 LLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFSE 125
Query: 750 NVQVIIATPGRMI 788
N +++AT GR++
Sbjct: 126 NQDIVVATTGRLL 138
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 101 bits (242), Expect = 2e-20
Identities = 42/115 (36%), Positives = 77/115 (66%)
Frame = +3
Query: 453 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 632
G++KP+P+QE + + + GKDV+A + GTGKT AY +PVLE++ P++ QA+I+ P+R
Sbjct: 23 GFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSR 82
Query: 633 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLM 797
EL +Q Q+ + +++R GG N++ + ++ ++ +I+ TPGR+ +L+
Sbjct: 83 ELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELI 137
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 101 bits (242), Expect = 2e-20
Identities = 54/137 (39%), Positives = 82/137 (59%), Gaps = 4/137 (2%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+FE + L + + E G+ +P+ IQ SIP L+G+DVLA A+ GTGKT A+ IPVL
Sbjct: 2 KFESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLN 61
Query: 579 Q-VDPKKD---TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 746
++ KK I L++ PTRELA+Q S++ ++ +T +R + TGG I
Sbjct: 62 TLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAAD 121
Query: 747 QNVQVIIATPGRMIDLM 797
+ +++ATPGRM DL+
Sbjct: 122 YGIDILVATPGRMFDLI 138
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 101 bits (242), Expect = 2e-20
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = +3
Query: 390 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 569
+G F+ F L++ LL I ++G+ P+PIQ +IP L G DV+A A+ G+GKT A+ IP
Sbjct: 20 KGGGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIP 79
Query: 570 VLE--QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
+L + K I+ L++ PTREL+LQ + L K D+R GG ++ +
Sbjct: 80 MLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELL 139
Query: 744 YQNVQVIIATPGRMIDLMD 800
N V++ATPGR++ +M+
Sbjct: 140 ASNPDVVVATPGRLLHIME 158
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 101 bits (242), Expect = 2e-20
Identities = 53/134 (39%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+FE L L + + G+E P+PIQ IP+ L G+D+LA A G+GKT A+ +PV+
Sbjct: 204 DFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIM 263
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQNV 755
+ + T ALI+ PTRELA+Q + EL ++ ++ GG L + R+ Q+V
Sbjct: 264 RALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHV 323
Query: 756 QVIIATPGRMIDLM 797
+VIIATPGR++D++
Sbjct: 324 KVIIATPGRLLDII 337
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 101 bits (241), Expect = 3e-20
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 5/150 (3%)
Frame = +3
Query: 363 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 542
+K ++T F + LL G+ G +P PIQ +IP L G+D+L A+ G+
Sbjct: 76 LKEIELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGS 135
Query: 543 GKTGAYCIPVLEQV----DPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT 707
GKT A+ +P+L+++ D ++ T +ALI+ PTRELA+Q Q ++K I +
Sbjct: 136 GKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVSKSAHISTALVL 195
Query: 708 GGTNLRDDIMRIYQNVQVIIATPGRMIDLM 797
GG + I RI + V+IATPGR+ DLM
Sbjct: 196 GGVSKLSQIKRIAPGIDVLIATPGRLTDLM 225
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 101 bits (241), Expect = 3e-20
Identities = 53/138 (38%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N F E L L + + G+ P+PIQ+ +IP L G+DVLA A+ GTGKT AY +P++
Sbjct: 3 NTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLI 62
Query: 576 EQV--DPKKDTI----QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 737
+ + +++T +ALI+ PTRELA Q + A+HT++ ++ GGT++R
Sbjct: 63 QMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQE 122
Query: 738 RIYQNVQVIIATPGRMID 791
++ + V ++IATPGR++D
Sbjct: 123 QLAKGVDILIATPGRLLD 140
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 101 bits (241), Expect = 3e-20
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +3
Query: 429 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQ 608
+L I G+E+PSPIQ +IP+ L+G D++ +A+ GTGKT A+ +P+L ++DP + Q
Sbjct: 34 VLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQ 93
Query: 609 ALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRM 785
LI+ PTRELALQ + A + V+ GG + + + Q Q+++ATPGR+
Sbjct: 94 LLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQILVATPGRL 153
Query: 786 ID 791
D
Sbjct: 154 CD 155
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 101 bits (241), Expect = 3e-20
Identities = 46/130 (35%), Positives = 76/130 (58%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L L + E G+ +P+PIQ ++P L+G+DV A+ GTGKT A+ +P+L +
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHK 194
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+ + ++ L++ PTRELALQ + + +K+TD+ V GG + + V V
Sbjct: 195 LGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDV 254
Query: 762 IIATPGRMID 791
+ ATPGR++D
Sbjct: 255 VAATPGRLLD 264
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 101 bits (241), Expect = 3e-20
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 575
F +F L ++ I +G+ +P+PIQ +IP+ ++G DV+ A+ GTGKT + +P+L
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 576 ------EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 737
E P + ++ALI+ PTRELA Q + AK T +R V GG ++ I
Sbjct: 82 LMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQ 141
Query: 738 RIYQNVQVIIATPGRMID 791
+ + V+++IATPGR++D
Sbjct: 142 TLRRGVELVIATPGRLLD 159
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 101 bits (241), Expect = 3e-20
Identities = 50/134 (37%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FEE L ++ + + +E P+P+Q +IPIAL G+DV A A G+GKT A+ IP +E+
Sbjct: 18 FEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPTVER 77
Query: 582 VDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGG-TNLRDDIMRIYQ 749
+ K T +A+I+ PTRELA QT + ++ + T + ++ TGG +N++++ R+ +
Sbjct: 78 LLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTALLLTGGSSNVKEEEERLLE 137
Query: 750 NVQVIIATPGRMID 791
++ TPGR+ID
Sbjct: 138 YPDFLVCTPGRIID 151
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 100 bits (240), Expect = 4e-20
Identities = 51/134 (38%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FEE L LL + + G ++PS IQ +IP L GKDVL ++ G+GKT A+ +P+L++
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 582 VDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
+ +ALI+ PTRELA QT+ +C +L + ++ V GGT+ + + V
Sbjct: 82 LTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSDGV 141
Query: 756 QVIIATPGRMIDLM 797
+I+AT GR++DL+
Sbjct: 142 DIIVATHGRLLDLV 155
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 100 bits (240), Expect = 4e-20
Identities = 52/140 (37%), Positives = 80/140 (57%), Gaps = 3/140 (2%)
Frame = +3
Query: 381 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 560
T N FE L L+ + G+E+P+PIQ A++P L GKD+L A GTGKT A+
Sbjct: 31 TSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAF 90
Query: 561 CIPVLEQVDPKKD---TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDD 731
+P+L+++ P T AL++VPTRELA+Q ++ + I V+ GG +
Sbjct: 91 SLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQ 150
Query: 732 IMRIYQNVQVIIATPGRMID 791
+ + + V V++ATPGR +D
Sbjct: 151 LRVLKRGVDVVVATPGRALD 170
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 100 bits (240), Expect = 4e-20
Identities = 51/133 (38%), Positives = 78/133 (58%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E L E L + G+E P+PIQ +IP AL+GKDV+ A GTGKT A+ +P++++
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDR 65
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+ K T +AL++ PTRELALQ + +R V GG + + Q ++
Sbjct: 66 LAGKPGT-RALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKREI 124
Query: 762 IIATPGRMIDLMD 800
+IATPGR++D ++
Sbjct: 125 VIATPGRLVDHLE 137
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 100 bits (240), Expect = 4e-20
Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L ++ I + G+E+P+PIQ+ IP+ L+G DV +A GTGKT A+ IP +E
Sbjct: 6 FSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIEL 65
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 758
P +Q +++ P+RELA+Q +LA H I ++ GG + I + + VQ
Sbjct: 66 CQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSRGVQ 125
Query: 759 VIIATPGRMID 791
+II TPGR+ID
Sbjct: 126 IIIGTPGRVID 136
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 100 bits (240), Expect = 4e-20
Identities = 52/145 (35%), Positives = 88/145 (60%), Gaps = 8/145 (5%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 575
+EE L ELL + G++KPSPIQ A+IP+ L +DV+ A+ G+GKT A+ +P+L
Sbjct: 315 WEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAY 374
Query: 576 -EQVDPKKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 737
++ P + + A+++ PTRELA Q + ++ A + RV GG ++ + +
Sbjct: 375 ISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGL 434
Query: 738 RIYQNVQVIIATPGRMIDLMDXQVA 812
+I Q +++IATPGR+ID ++ + A
Sbjct: 435 KITQGCEIVIATPGRLIDCLERRYA 459
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 100 bits (240), Expect = 4e-20
Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
Frame = +3
Query: 417 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD--- 587
L R+ L + G+EKP+PIQ ++P +SG+DV+ AK G+GKT A+ +P+ +
Sbjct: 604 LTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP 663
Query: 588 PKKDTIQ--ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
P KDT LI+ PTRELA+Q + C K +R + GG +R+ I + + ++
Sbjct: 664 PLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEI 723
Query: 762 IIATPGRMIDLM 797
I+ TPGRMIDL+
Sbjct: 724 IVCTPGRMIDLL 735
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 100 bits (239), Expect = 5e-20
Identities = 47/112 (41%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Frame = +3
Query: 462 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP-KKDTIQALIVVPTREL 638
+P+ IQE +IP+ L+GKDV+ R+K G+GKT AY +PVL V+ K +++A+I++PTREL
Sbjct: 18 EPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEKLKGKSVKAIIILPTREL 77
Query: 639 ALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDL 794
ALQT ++ L K + I+ + GG ++ + + ++I TPGR++DL
Sbjct: 78 ALQTHRVASRLGKISGIKSTIVYGGASIIRQVEEL-PGSDIVIGTPGRILDL 128
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 100 bits (239), Expect = 5e-20
Identities = 45/134 (33%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F + L +L + E G+ P+PIQ A+IP+ L G+D L +A+ GTGKT A+ +P+L
Sbjct: 27 QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNV 755
+++ + QA+++ PTRELA+Q + L ++ ++V+ GG ++ D + +
Sbjct: 87 KLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGA 146
Query: 756 QVIIATPGRMIDLM 797
+++ TPGR+ DL+
Sbjct: 147 HIVVGTPGRVKDLI 160
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 100 bits (239), Expect = 5e-20
Identities = 48/135 (35%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L +L I ++G+ +PS IQ +IP L G+DV+A A+ GTGKT + +P+LE
Sbjct: 7 FNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLEI 66
Query: 582 V----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ + + + ++AL++ PTRELA Q ++ +H ++ V GG + +M + +
Sbjct: 67 LSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRR 126
Query: 750 NVQVIIATPGRMIDL 794
++IATPGRM+DL
Sbjct: 127 GADILIATPGRMMDL 141
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 100 bits (239), Expect = 5e-20
Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE F ++ G+ G+++P+PIQ +IP ++G DV+ A+ GTGKT AY +P++++
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQK 62
Query: 582 -VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+ + ++ L++ PTRELA Q S L + IR GG N+ I R+ V
Sbjct: 63 MLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVD 122
Query: 759 VIIATPGRMID 791
V++A PGR++D
Sbjct: 123 VVVACPGRLLD 133
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 100 bits (239), Expect = 5e-20
Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F +F L +L + E ++ P+ IQ+ +IP + GKD+LA A+ GTGKT A+ +P+LE+
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 582 V-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 746
+ + K+ + L++VPTRELA Q +Q AK + + GG + I +
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQALK 122
Query: 747 QNVQVIIATPGRMIDL 794
+ +++ATPGR++DL
Sbjct: 123 SGIDIVVATPGRLLDL 138
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 100 bits (239), Expect = 5e-20
Identities = 52/133 (39%), Positives = 77/133 (57%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F EF L ELL I + +P+PIQ A+IP AL GKD++ A+ G+GKT A+ IP+L+
Sbjct: 100 FTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQT 159
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+ AL++ PTRELA Q + L +R + GG ++ + + + V
Sbjct: 160 LYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHV 219
Query: 762 IIATPGRMIDLMD 800
IIATPGR+ID ++
Sbjct: 220 IIATPGRLIDHLE 232
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 99 bits (238), Expect = 7e-20
Identities = 50/138 (36%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++F + + + EKG+E+P+ +QE IPI GK V+ +++ G+GKT + +P++++
Sbjct: 4 FKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPLMDK 63
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT--DIRVMVTTGGTNLRDDIMRI-YQN 752
V P D +Q +I P+RELA Q Q +LA+ + +IRV GGT+ + + ++ +Q
Sbjct: 64 VKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLKHQQ 123
Query: 753 VQVIIATPGRMIDLMDXQ 806
V+I TPGR++D+M+ Q
Sbjct: 124 PHVVIGTPGRILDMMNEQ 141
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 99 bits (238), Expect = 7e-20
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E L +L + G+E PS IQ +IP L G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 11 FAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLSR 70
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQNVQ 758
+D ++ Q L++ PTRELA Q + ++ + + V+ GG R+ + + + Q
Sbjct: 71 LDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGAQ 130
Query: 759 VIIATPGRMIDLMD 800
VI+ TPGR+ID +D
Sbjct: 131 VIVGTPGRVIDHLD 144
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 99 bits (238), Expect = 7e-20
Identities = 54/134 (40%), Positives = 86/134 (64%), Gaps = 7/134 (5%)
Frame = +3
Query: 417 LKRELLMGIFEK--GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL----E 578
L E +M + + G+ KPSPIQ +IPI LSG+D++ AK G+GKT +Y +P++ +
Sbjct: 393 LMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQD 452
Query: 579 QVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
Q+ PK + L++ PTRELALQ + ++ + D++V GG+N+ + I + + V
Sbjct: 453 QLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGV 512
Query: 756 QVIIATPGRMIDLM 797
VI+ATPGR+IDL+
Sbjct: 513 NVIVATPGRLIDLL 526
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 99 bits (238), Expect = 7e-20
Identities = 61/189 (32%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Frame = +3
Query: 258 NHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLM 437
+H N Q + ++ K V +S ++ +I +++T F +F L ++ L
Sbjct: 28 SHRQNKKKQLRKQLKKPEWQVERESISRLMQNYEKINVNEIT-----RFSDFPLSKKTLK 82
Query: 438 GIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD----PKKDTI 605
G+ E + + IQ+ +I +AL GKDVL AK G+GKT A+ +PVLE + D +
Sbjct: 83 GLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGL 142
Query: 606 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRM 785
LI+ PTRELA QT ++ ++ K+ D + GG +L+ + RI N+ +++ TPGR+
Sbjct: 143 GVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGRL 201
Query: 786 IDLMDXQVA 812
+ MD V+
Sbjct: 202 LQHMDETVS 210
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 99 bits (238), Expect = 7e-20
Identities = 54/154 (35%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
Frame = +3
Query: 360 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 539
+I D T+ F++ + L G+ E + K + IQ SIP++L G DVLA AK G
Sbjct: 29 KIDEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTG 88
Query: 540 TGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT 707
+GKT A+ +PV+E++ +K D + ALI+ PTRELA+Q ++ ++ HT +
Sbjct: 89 SGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVI 148
Query: 708 GGTNLRDDIMRIYQNVQVIIATPGRMIDLMDXQV 809
GG +++ ++ RI + ++I TPGR++ +D V
Sbjct: 149 GGKDVKFELERI-SRINILIGTPGRILQHLDQAV 181
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 99.5 bits (237), Expect = 9e-20
Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+FEE + +LL I E G+ + +PIQE SIP L GKD+ A+ GTGKT A+ IPV+
Sbjct: 2 KFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVIH 61
Query: 579 QVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQN 752
+ K I AL++ PTREL +Q ++ +L KH++ IR + GGT+ + +
Sbjct: 62 NILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLEGL 121
Query: 753 VQVIIATPGRMIDLM 797
+I+ATPGR+ID++
Sbjct: 122 NGIIVATPGRLIDMI 136
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 99.5 bits (237), Expect = 9e-20
Identities = 49/127 (38%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Frame = +3
Query: 429 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV---DPKKD 599
LL + + ++ P+P+Q +IP L GKDV+A A+ GTGKT + +P+L+++ P
Sbjct: 12 LLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVS 71
Query: 600 TIQA--LIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAT 773
+ +A L++VPTRELA Q Q I K D+R + GG ++ +M++ + V V++AT
Sbjct: 72 SNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKLRKGVDVLVAT 131
Query: 774 PGRMIDL 794
PGR++DL
Sbjct: 132 PGRLLDL 138
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 99.5 bits (237), Expect = 9e-20
Identities = 47/132 (35%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE+F L + L + E G+ P+PIQE S + +SG+D++ A+ GTGKT AY +P+L+
Sbjct: 4 FEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQTGTGKTFAYLLPLLKL 63
Query: 582 VD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+T + +++VPTREL +Q + +L K+ ++ + GG N+ +Y+ V
Sbjct: 64 YKFTHTNTPKIVVLVPTRELVVQVVEEVEKLTKYMSVKTLGIYGGVNINTQKKAVYEGVD 123
Query: 759 VIIATPGRMIDL 794
+++ TPGR +DL
Sbjct: 124 ILVGTPGRTMDL 135
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 99.5 bits (237), Expect = 9e-20
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
Frame = +3
Query: 384 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 563
DT+ + F L L + G+E +PIQ +IP+ L G+DV+ A+ GTGKT A+
Sbjct: 5 DTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFA 64
Query: 564 IPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMR 740
+P+L +D K + QAL++ PTRELA Q ++ + +R++ GG ++R +
Sbjct: 65 LPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKS 124
Query: 741 IYQNVQVIIATPGRMID 791
+ + +++ATPGR++D
Sbjct: 125 LREGTHIVVATPGRLLD 141
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 99.5 bits (237), Expect = 9e-20
Identities = 49/140 (35%), Positives = 87/140 (62%), Gaps = 7/140 (5%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE L+ E++ + + + KP+PIQ +IPI L+G+D++A A+ G+GKT A+ +P++
Sbjct: 176 FERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHH 235
Query: 582 VDPKKDTIQ-------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 740
+ K+D+++ +IV PTRELA+Q + A T ++V V+ GGT ++ +
Sbjct: 236 LLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQL 295
Query: 741 IYQNVQVIIATPGRMIDLMD 800
+ V++ATPGR++D +D
Sbjct: 296 MRGGCHVLVATPGRLLDFID 315
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 99.5 bits (237), Expect = 9e-20
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + + +L I + G+E P+ IQ A+IP ++G DV+ A+ GTGKT A+ IP+L +
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+D QAL++VPTRELALQ ++ + + + V+ GG++ + + + Q
Sbjct: 75 IDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQ 134
Query: 759 VIIATPGRMIDLMD 800
V++ TPGRMID ++
Sbjct: 135 VVVGTPGRMIDHLE 148
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 99.1 bits (236), Expect = 1e-19
Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Frame = +3
Query: 366 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 545
+TSD+ F + L +++L G+ G+ KPSPIQ SIP+ G D++ RAK+GTG
Sbjct: 14 RTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTG 73
Query: 546 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNL 722
KT + I LE +D K ++Q +I+ PTRE+A+Q ++ L + ++V GG +
Sbjct: 74 KTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIGGVAM 133
Query: 723 RDDIMRIYQNVQVIIATPGRMIDLMD 800
D ++ N + I PGR+ L+D
Sbjct: 134 DIDRKKL-SNCHIAIGAPGRVKHLID 158
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 99.1 bits (236), Expect = 1e-19
Identities = 46/131 (35%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+E L ++L+ + + + + + IQ +IP+ L GK++ ++ GTGKT ++ +P+LE+
Sbjct: 3 FKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEK 62
Query: 582 VDPKKDTIQALIVVPTRELALQ-TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
++P K +QA+I+ PTRELA+Q +QI I ++ ++ + GG ++RD I R+ ++ Q
Sbjct: 63 IEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRL-KDSQ 121
Query: 759 VIIATPGRMID 791
+++ TPGR+ D
Sbjct: 122 IVVGTPGRVND 132
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/136 (34%), Positives = 83/136 (61%), Gaps = 3/136 (2%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F+ L +L I E G+ + + +Q+ IP+AL GKD++A A+ GTGKT ++ +PVLE
Sbjct: 23 KFDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLE 82
Query: 579 QVDPK---KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
Q+ + K ++AL++ PTRELA+Q + ++ ++ + GG N+ + Q
Sbjct: 83 QLSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 142
Query: 750 NVQVIIATPGRMIDLM 797
V +++ATPGR+ D++
Sbjct: 143 GVDILVATPGRLFDII 158
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 99.1 bits (236), Expect = 1e-19
Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L R L+ I G+ P+PIQ ++IP+AL G+D+ A GTGKT AY +P LE+
Sbjct: 159 FYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLER 218
Query: 582 V--DP--KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ P K + L++VPTREL Q Q+ +L + T I V + GG +++ + Q
Sbjct: 219 LLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQ 278
Query: 750 NVQVIIATPGRMID 791
N ++IATPGR+ID
Sbjct: 279 NPDIVIATPGRLID 292
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 99.1 bits (236), Expect = 1e-19
Identities = 57/153 (37%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Frame = +3
Query: 345 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 524
PPK + IK S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL
Sbjct: 29 PPK-KDIKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 86
Query: 525 RAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMV 701
+AK+G GKT + + L+Q++P + L++ TRELA Q S+ +K+ ++V V
Sbjct: 87 QAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSV 146
Query: 702 TTGGTNLRDDIMRIYQNV-QVIIATPGRMIDLM 797
GG +++ D + +N V++ TPGR++ L+
Sbjct: 147 FFGGLSIKKDEEVLKKNCPHVVVGTPGRILALV 179
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 98.7 bits (235), Expect = 2e-19
Identities = 49/146 (33%), Positives = 84/146 (57%), Gaps = 5/146 (3%)
Frame = +3
Query: 378 VTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 557
++ T F + L LL + E G+ KP+PIQ SIP+ L G+D+L A+ GTGKT +
Sbjct: 1 MSPTSAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTAS 60
Query: 558 YCIPVLEQV--DPK---KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 722
+ +P+L ++ P+ K+ + L++ PTREL Q + ++H +RV GG +
Sbjct: 61 FALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQ 120
Query: 723 RDDIMRIYQNVQVIIATPGRMIDLMD 800
+ + + V +I+A PGR++DL++
Sbjct: 121 VHQVKALEEGVDIIVAAPGRLLDLIE 146
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 98.7 bits (235), Expect = 2e-19
Identities = 47/131 (35%), Positives = 79/131 (60%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+ + L L G+ + GWE + +Q ++PIA G DV+ +A+ G+GKT A+ +P+LE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
P +QAL++ PTRELA Q +Q L + + ++ GGT+L + + V +
Sbjct: 67 CQP-SGKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVDI 125
Query: 762 IIATPGRMIDL 794
I+ TPGR++D+
Sbjct: 126 IVGTPGRVMDM 136
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 98.7 bits (235), Expect = 2e-19
Identities = 49/113 (43%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Frame = +3
Query: 465 PSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELA 641
P+ IQE IPI L+ K D++A AK GTGKT A+ +P+L+ +D D IQA+I+ PTREL
Sbjct: 26 PTEIQEKVIPIVLNDKEDIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELG 85
Query: 642 LQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLM 797
Q + I A+HT + + GG ++ I R+ + +I+ATPGR+ DL+
Sbjct: 86 QQIAANLISFAEHTSQVSIATLCGGIPIKPQIERLKEATHIIVATPGRLADLV 138
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 98.7 bits (235), Expect = 2e-19
Identities = 50/135 (37%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L L+ + E G+ P+PIQ +IP L+GK+VLA A+ GTGKT ++ +P+L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 582 -VDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
D K ++A+I+ PTRELALQ + + AK+ + M GG + R+ +
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 750 NVQVIIATPGRMIDL 794
V +++ATPGR++D+
Sbjct: 123 GVDLLVATPGRLLDM 137
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 98.7 bits (235), Expect = 2e-19
Identities = 67/197 (34%), Positives = 99/197 (50%), Gaps = 18/197 (9%)
Frame = +3
Query: 273 SISQTKGEVDKSIDDVGWKSKLKIPPKDR--RIKTSD--VTDTRGN------EFEEFCLK 422
S S +DK DD W K KDR RI D ++ GN + E +
Sbjct: 216 SYSSRYDSLDKRFDDKHWSEKSLSQMKDRDWRIFREDFGISARGGNIPKPLRSWRESGIP 275
Query: 423 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD--PKK 596
+L I E G+++PSPIQ +IPI L +D++ A+ G+GKT ++ IP+L + PK
Sbjct: 276 ASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLAYISKLPKL 335
Query: 597 DT------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
D QALI+VPTRELA Q + A +R + GG ++ D + +
Sbjct: 336 DEHTKALGPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAE 395
Query: 759 VIIATPGRMIDLMDXQV 809
++IATPGR+ D ++ V
Sbjct: 396 IVIATPGRLKDCIERHV 412
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 98.3 bits (234), Expect = 2e-19
Identities = 53/133 (39%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F+ F L + +L GI G+ K + +Q+ +IP AL +D++ A+ G+GKT A+ +P+L+
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 582 VDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ K +ALI+VPTRELA Q + C LAK T I+ + TGG + +N
Sbjct: 62 LLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGGQEFKFQAALFRKN 121
Query: 753 VQVIIATPGRMID 791
++IIATPGR+ID
Sbjct: 122 PEIIIATPGRLID 134
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 98.3 bits (234), Expect = 2e-19
Identities = 53/138 (38%), Positives = 86/138 (62%), Gaps = 5/138 (3%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE L+ EL+ I +G+ + IQ +IP+ L+ D+LA A+ GTGKT A+ +P+L++
Sbjct: 3 FEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQR 62
Query: 582 VDPKKDT----IQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNLRDDIMRIY 746
+ K+ T +++LIV PTRELA Q + I +E+ + +IR GG + I ++
Sbjct: 63 LAAKQSTKVQGVRSLIVTPTRELAAQVA-ISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 747 QNVQVIIATPGRMIDLMD 800
+ V V+IATPGR++DL +
Sbjct: 122 EGVDVLIATPGRLLDLYE 139
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 98.3 bits (234), Expect = 2e-19
Identities = 53/186 (28%), Positives = 101/186 (54%)
Frame = +3
Query: 234 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEF 413
++ I ++NH ++I+ G +K+ D+ + + + + T++ + + FE+
Sbjct: 104 SDYNIINNNH--DNINFIHGNKNKNHDNSFHNNDDVKNGEVKNLVTNEEREKQNVTFEDL 161
Query: 414 CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPK 593
+ E+L I E GW+KP+ IQ +P A KD++ ++ G+GKT + IP+L+ +
Sbjct: 162 NICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQDLKVN 221
Query: 594 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIAT 773
K + AL++ PTREL +Q SQ L + I + GG ++ + + + VI++T
Sbjct: 222 KQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQSLNLAKKPNVIVST 281
Query: 774 PGRMID 791
PGR++D
Sbjct: 282 PGRILD 287
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 98.3 bits (234), Expect = 2e-19
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
Frame = +3
Query: 294 EVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFC---LKRELLMGIFEKGWEK 464
E D D K K+ + T + FE F L EL+ + K
Sbjct: 44 ESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQACKNLNYSK 103
Query: 465 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 644
P+PIQ +IP AL G D++ A+ G+GKT A+ IP+L ++ ++ A I+ PTRELA
Sbjct: 104 PTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQ 163
Query: 645 QTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 800
Q + L +R GG N+ D + + +IIATPGR++D ++
Sbjct: 164 QIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLE 215
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 97.9 bits (233), Expect = 3e-19
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+ F +F LK++LL + E G+E+PS +Q IP A+ GKDVL +AK GTGKT + + VL
Sbjct: 38 SSFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVL 97
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI-YQN 752
Q+ L++ TRELA Q L K T+ +V GG DI + +
Sbjct: 98 NQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKK 157
Query: 753 VQVIIATPGRMIDLM 797
+++ATPGR + L+
Sbjct: 158 PHILVATPGRCLSLI 172
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 97.9 bits (233), Expect = 3e-19
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FEE L +LL I E+ + KP+PIQ +IP L KDVLA A GTGKT A+ +P L+
Sbjct: 3 FEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQF 62
Query: 582 V--DPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ DP+ + LI+ PTRELA Q ++ +L H V TGG + +
Sbjct: 63 LLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEILQSK 122
Query: 753 VQVIIATPGRMIDLMDXQ 806
+ +++ATPGR++++M +
Sbjct: 123 IDILVATPGRLLNIMSKE 140
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 97.9 bits (233), Expect = 3e-19
Identities = 51/134 (38%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
EF E L L + + G+ +PIQ A+IP+AL+G+DVL A+ GTGKT A+ +P+++
Sbjct: 3 EFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLID 62
Query: 579 QV---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
++ K +AL++ PTRELA Q + + AK T + + GG + D ++ +
Sbjct: 63 KLMNGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDR 122
Query: 750 NVQVIIATPGRMID 791
V V+IATPGR++D
Sbjct: 123 GVDVLIATPGRLLD 136
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 97.5 bits (232), Expect = 4e-19
Identities = 49/134 (36%), Positives = 80/134 (59%), Gaps = 1/134 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L ++ + + G+E PSPIQ A+IP L+G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+ Q L++ PTRELA+Q ++ A + RV+ GG + + + + V
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 759 VIIATPGRMIDLMD 800
VI+ TPGR+ID ++
Sbjct: 137 VIVGTPGRVIDHLE 150
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 97.5 bits (232), Expect = 4e-19
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N F F L ++ + + +KP+ IQ IP AL G+D++ +++ GTGKT ++ +P++
Sbjct: 2 NGFSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIV 61
Query: 576 EQVDPKKDTIQALIVVPTRELALQT-SQICIELAKHTD-IRVMVTTGGTNLRDDIMRIYQ 749
+ V+P+ +QA+IV PTRELA Q ++ L K D I+ + TGG + I R+
Sbjct: 62 QNVNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDYIKTSLITGGMDRERQIGRVKV 121
Query: 750 NVQVIIATPGRMIDLMDXQ 806
+ Q++I TPGR++DL Q
Sbjct: 122 SPQIVIGTPGRILDLFKEQ 140
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 97.5 bits (232), Expect = 4e-19
Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Frame = +3
Query: 417 LKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAKNGTGKTGAYCIPVLEQVDPK 593
++++ + I E G KP+ IQE +IP+ L S D + A+ GTGKT A+ +PVL +D
Sbjct: 9 IRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVLHHIDAN 68
Query: 594 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT--GGTNLRDDIMRIYQNVQVII 767
D IQALI+ PTREL Q + + K+ D R+ + GG + + + + ++I
Sbjct: 69 SDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLKRTTHIVI 128
Query: 768 ATPGRMIDLMD 800
ATPGR+IDL++
Sbjct: 129 ATPGRLIDLIE 139
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 97.5 bits (232), Expect = 4e-19
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E L +L + G+E PSPIQ SIP L+G +L A+ GTGKT A+ +P+L +
Sbjct: 26 FAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLSR 85
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELA-KHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+D Q L++ PTRELA+Q ++ A K + V+ GG + I + + Q
Sbjct: 86 IDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGAQ 145
Query: 759 VIIATPGRMID 791
VI+ TPGRM+D
Sbjct: 146 VIVGTPGRMLD 156
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 97.5 bits (232), Expect = 4e-19
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 10/161 (6%)
Frame = +3
Query: 342 IPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVL 521
I P++ I + F ++ ++ +++ + + G P PIQ ++P+AL+G D++
Sbjct: 19 IEPEETIISDEKPHEIEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDII 78
Query: 522 ARAKNGTGKTGAYCIPVLEQV----DPKKDTI------QALIVVPTRELALQTSQICIEL 671
+AK GTGKT + IP L++V DP D + QAL++VPTRELA+Q ++
Sbjct: 79 GQAKTGTGKTLGFGIPALQRVVGRDDPGFDKLAVPGAPQALVIVPTRELAVQVAKDLENA 138
Query: 672 AKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDL 794
A+ + R+ GG + + + V++++ TPGR+IDL
Sbjct: 139 ARKRNARIATIYGGRAYEPQVDSLQKGVEIVVGTPGRLIDL 179
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 97.5 bits (232), Expect = 4e-19
Identities = 63/190 (33%), Positives = 103/190 (54%), Gaps = 19/190 (10%)
Frame = +3
Query: 288 KGEVDKSIDDVGWKSKL--KIPPKDRRIKTSDVT-DTRGNE-------FEEFCLKRELLM 437
K E + DD W K ++ +D RI D + T+G + +++ L +L
Sbjct: 345 KKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILE 404
Query: 438 GIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD--PKKDTIQ- 608
I + G+++P+PIQ +IPI L +D++ A+ G+GKT A+ IP+L + PK D I+
Sbjct: 405 VIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEE 464
Query: 609 ------ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIA 770
A+I+ PTRELA Q + I+ K IR + GG + D R+ +++IA
Sbjct: 465 SDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIA 524
Query: 771 TPGRMIDLMD 800
TPGR+ID+++
Sbjct: 525 TPGRLIDVLE 534
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 97.1 bits (231), Expect = 5e-19
Identities = 47/117 (40%), Positives = 70/117 (59%)
Frame = +3
Query: 456 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRE 635
+EK P+QE +IP+ KDVL A GTGKT AY IP LE +D + IQ +I PTRE
Sbjct: 17 FEKMMPVQEQAIPLLRERKDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRE 76
Query: 636 LALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDXQ 806
L +Q Q+ ++ + I+ GG L+ R+ + Q+I+ TPGR+++L+D +
Sbjct: 77 LVMQIHQVIQLFSQGSGIKSGAFIGGVELKRQHERLKKKPQIIVGTPGRLVELIDSK 133
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 97.1 bits (231), Expect = 5e-19
Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F + L + LL + +KG+ P+PIQ +IP+ +SG+D+L A+ GTGKT A+ +P+L
Sbjct: 66 QFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILH 125
Query: 579 QV-DPKKDT----IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
++ + KK + L++ PTRELA Q ++ + KH + V GG + +
Sbjct: 126 RLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKAL 185
Query: 744 YQNVQVIIATPGRMID 791
V V++ATPGR++D
Sbjct: 186 AAGVDVVVATPGRLMD 201
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 97.1 bits (231), Expect = 5e-19
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E L + I + G+E P+ IQE +IPIAL G D+LA A GTGKT A+C P ++
Sbjct: 19 FAELDLDFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAVQH 78
Query: 582 V---DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ D + T + LI+ P+RELA Q + +L KHT I+ + GGT ++ +
Sbjct: 79 ILDRDEQSTTAPKVLILAPSRELARQIFNVVEQLTKHTRIQSHLIIGGTPYGMQQQQLSE 138
Query: 750 NVQVIIATPGRMIDLMDXQ 806
+++ATPGR+++L + Q
Sbjct: 139 PCDILVATPGRLVELDEKQ 157
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 97.1 bits (231), Expect = 5e-19
Identities = 56/197 (28%), Positives = 105/197 (53%), Gaps = 9/197 (4%)
Frame = +3
Query: 234 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRI-KTSDVTDTRGN---- 398
T +++S S + N K D+ I+D+ ++K D + + +DV GN
Sbjct: 63 TGDQLSRSRSMPNP---PKAITDEEIEDLFMRNKASTDGPDISVYEGADVKVEAGNHIPP 119
Query: 399 --EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 572
+F ++ E+L + G++ P+P+Q SIP L+G+D++ ++ G+GKT A+ +PV
Sbjct: 120 IIDFPGCGIRNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLIVTSQTGSGKTAAFMLPV 179
Query: 573 LEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 746
+ Q+ + + PTRELA+Q + + K TD++ GG + + I +
Sbjct: 180 ITQLIGTCHSPNPSCVALCPTRELAIQIFEETRKFCKGTDLKTTCVFGGAPITEQIRNLS 239
Query: 747 QNVQVIIATPGRMIDLM 797
+ + ++IATPGR+ID++
Sbjct: 240 RGIDIVIATPGRLIDIL 256
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 97.1 bits (231), Expect = 5e-19
Identities = 46/128 (35%), Positives = 80/128 (62%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
+E++ LK +LL GI+ G+E PS IQ+A+I + G+D+ A+A++GTGKTGA+ + L+
Sbjct: 40 WEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQI 99
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
D +D Q L++ TRE+A Q + +L RV + +GG+ + D + + + +
Sbjct: 100 CDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADKVALEKKPHI 159
Query: 762 IIATPGRM 785
++ TPGR+
Sbjct: 160 VVGTPGRV 167
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 97.1 bits (231), Expect = 5e-19
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F +F L ++ L G+ E + + IQ+ +I +AL GKDVL AK G+GKT A+ +PVLE
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 582 VD----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ D + LI+ PTRELA QT ++ ++ K+ D + GG +L+ + RI
Sbjct: 131 LYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-N 189
Query: 750 NVQVIIATPGRMIDLMDXQV 809
N+ +++ TPGR++ MD +
Sbjct: 190 NINILVCTPGRLLQHMDETI 209
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 96.7 bits (230), Expect = 6e-19
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L+ LL + E G+E PSPIQ IP L+G D+L A+ GTGKT A+ +P+L++
Sbjct: 46 FAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLDR 105
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLRDDIMRIYQNVQ 758
+D Q L++ PTRELA+Q ++ AK+ V+ GG ++ + ++ +
Sbjct: 106 LDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGAH 165
Query: 759 VIIATPGRMID 791
VI+ TPGR++D
Sbjct: 166 VIVGTPGRVMD 176
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 96.7 bits (230), Expect = 6e-19
Identities = 49/137 (35%), Positives = 84/137 (61%), Gaps = 4/137 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE+ + + LL I + G+EKP+ IQ +IP+ L+ DV A A+ GTGKT A+ + +L++
Sbjct: 3 FEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQR 62
Query: 582 V----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
+ D K+ ++ L++ PTREL++Q + AK+ I + V GG +L + +
Sbjct: 63 LRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKILKE 122
Query: 750 NVQVIIATPGRMIDLMD 800
V ++IATPGR+++ +D
Sbjct: 123 GVDIVIATPGRVLEHVD 139
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 96.7 bits (230), Expect = 6e-19
Identities = 50/112 (44%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Frame = +3
Query: 465 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV-DPKKDTIQALIVVPTRELA 641
P+P+QE +IP AL G+D+LA A+ GTGKT A+ IP LE + D + +Q LI+VPTRELA
Sbjct: 50 PTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELA 109
Query: 642 LQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLM 797
+Q + +L + GGT+ R+ I I +V++ATPGR+ D M
Sbjct: 110 MQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSIRSGARVVVATPGRLEDYM 161
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 96.7 bits (230), Expect = 6e-19
Identities = 45/137 (32%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
++F + L E+L + G E+P+ IQE +IP L GK+V+ +A+ GTGKT AY +P++
Sbjct: 2 DKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPII 61
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTT--GGTNLRDDIMRIYQ 749
E++D K+ +QA+I+ PT EL +Q + + +L + ++ TT G N++ + ++
Sbjct: 62 EKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKN 121
Query: 750 NVQVIIATPGRMIDLMD 800
+++ T GR+++L++
Sbjct: 122 KPHILVGTTGRILELIN 138
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 96.7 bits (230), Expect = 6e-19
Identities = 49/131 (37%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAKNGTGKTGAYCIPVLE 578
FEE LK ELL G++ G+ KPS IQEA++PI + S +++A++++GTGKT A+ + +L
Sbjct: 72 FEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLGMLN 131
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQ 758
VDP + QA+ + PT+ELALQT ++ ++ + ++I+ ++ + ++ Q
Sbjct: 132 CVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVPKNVTN-----Q 186
Query: 759 VIIATPGRMID 791
VII TPG++++
Sbjct: 187 VIIGTPGKILE 197
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 96.7 bits (230), Expect = 6e-19
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FEE L +E++ I E W P+PIQ SIPI L G D++ AK G+GKT ++ IP L
Sbjct: 87 FEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAKTGSGKTASFLIPALMH 146
Query: 582 VDPKK-----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 746
+ ++ D L++ PTRELALQT ++ + + + GG + I ++
Sbjct: 147 ISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKHVCIYGGEDRHRQINKLR 206
Query: 747 QNVQVIIATPGRMIDLMDXQV 809
+ +++ ATPGR+ID + V
Sbjct: 207 FHPEIVTATPGRLIDFLQSGV 227
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 96.7 bits (230), Expect = 6e-19
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 5/134 (3%)
Frame = +3
Query: 411 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 590
F L + L I +GWE P+ IQ +IP +SG+DV+ AK G+GKT A+ +P+L V
Sbjct: 408 FGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRD 467
Query: 591 KKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
++ A+++ PTRELA Q + C K +IR GG+++ +DI + +
Sbjct: 468 QRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGA 527
Query: 756 QVIIATPGRMIDLM 797
+V+I TPGRMIDL+
Sbjct: 528 EVVICTPGRMIDLL 541
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 96.3 bits (229), Expect = 8e-19
Identities = 45/136 (33%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N+F+++ + L + +G +P+ IQ+ IP AL G++++ ++ GTGKT AY +P+L
Sbjct: 2 NQFQQWPIGEPFLEALTNQGITEPTEIQQQVIPEALDGQNLIVHSQTGTGKTLAYLLPML 61
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI-YQN 752
+ + + QALI+ PT+ELA+Q ++ +L T I V+ GG N++ + ++ +
Sbjct: 62 TKTEELPEQTQALILAPTQELAMQIVEVAKQLTATTSITVLPLIGGANIKRQVEKLKKKK 121
Query: 753 VQVIIATPGRMIDLMD 800
V + TPGR+++LM+
Sbjct: 122 PHVAVGTPGRILELME 137
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 96.3 bits (229), Expect = 8e-19
Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 6/141 (4%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 578
F L +L + ++ + P PIQE +IP L GKD+L A+ G+GKT ++ +P+L+
Sbjct: 11 FATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQM 70
Query: 579 -QVDP--KKDTIQALIVVPTRELALQTSQI--CIELAKHTDIRVMVTTGGTNLRDDIMRI 743
Q P K I AL++VPTRELA+Q Q+ A I+ + GG ++ ++++
Sbjct: 71 LQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINPQMIQL 130
Query: 744 YQNVQVIIATPGRMIDLMDXQ 806
Q V+++IATPGR++DL+D +
Sbjct: 131 -QGVEILIATPGRLLDLVDSK 150
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 96.3 bits (229), Expect = 8e-19
Identities = 48/134 (35%), Positives = 83/134 (61%), Gaps = 3/134 (2%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F + L ++++ + + G+E P+PIQ+ +IP LSG+DVL +A+ GTGKT A+ +P++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 579 QVD-PKKDTI-QALIVVPTRELALQTSQICIELAKHT-DIRVMVTTGGTNLRDDIMRIYQ 749
+D +D Q L++ PTRELA+Q ++ AK+ ++ V GG I + Q
Sbjct: 68 NMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQ 127
Query: 750 NVQVIIATPGRMID 791
V+V++ T GR++D
Sbjct: 128 GVKVVVGTTGRVMD 141
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 96.3 bits (229), Expect = 8e-19
Identities = 45/118 (38%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
Frame = +3
Query: 450 KGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVP 626
KG+++PSPIQE +IP+ LS D++ +A+ GTGKT A+ +P++++++P QALI+ P
Sbjct: 20 KGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCP 79
Query: 627 TRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 800
TRELA+Q ++ K I + GG + D + + V +++ATPGR I ++
Sbjct: 80 TRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVDLVVATPGRCIHFIE 137
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 96.3 bits (229), Expect = 8e-19
Identities = 41/113 (36%), Positives = 69/113 (61%)
Frame = +3
Query: 453 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 632
GW+ P+Q ++P G+D++ +++ G+GKTGA+ +P+LE++DP + + QAL++VPTR
Sbjct: 56 GWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLVPTR 115
Query: 633 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMID 791
ELALQ L + T +RV GG + + ++ TPGR++D
Sbjct: 116 ELALQVEHEARTLFEGTGLRVAAVYGGVGYGKQNDALREGAHFVVGTPGRVLD 168
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 96.3 bits (229), Expect = 8e-19
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 8/156 (5%)
Frame = +3
Query: 348 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 527
P I++ T N F L EL+ + +G+E P+PIQ A+IP AL+G D+LA
Sbjct: 13 PVSDDIRSERKTTIMSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAA 72
Query: 528 AKNGTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAKHT 683
A+ GTGKT A+ +P LE++ P ++ L++ PTRELA Q Q K+
Sbjct: 73 AQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNL 132
Query: 684 DIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMID 791
+R V GG N+ + ++++AT GR++D
Sbjct: 133 PLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLD 168
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 96.3 bits (229), Expect = 8e-19
Identities = 53/151 (35%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Frame = +3
Query: 348 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 527
P + +K S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL +
Sbjct: 30 PAKKDVKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQ 88
Query: 528 AKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVT 704
AK+G GKT + + L+Q++P + L++ TRELA Q S+ +K+ +++V V
Sbjct: 89 AKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVF 148
Query: 705 TGGTNLRDDIMRIYQNV-QVIIATPGRMIDL 794
GG +++ D + +N +++ TPGR++ L
Sbjct: 149 FGGLSIKKDEEVLKKNCPHIVVGTPGRILAL 179
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 95.9 bits (228), Expect = 1e-18
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 7/139 (5%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F + L L + E G+E P+PIQ A+IP+ L G D+L A+ GTGKT A+ +P+L+
Sbjct: 5 KFTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQ 64
Query: 579 -------QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIM 737
+++PK + LI+ PTRELA+Q + +KH +++ V GG +
Sbjct: 65 NLSKHTRKIEPKSP--RCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVR 122
Query: 738 RIYQNVQVIIATPGRMIDL 794
+ V ++IATPGR++DL
Sbjct: 123 ALQGGVDILIATPGRLMDL 141
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 95.9 bits (228), Expect = 1e-18
Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N F+E L + + E+ ++ P+PIQ +IP AL G+DVL A+ GTGKT A +P+L
Sbjct: 2 NTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPIL 61
Query: 576 EQVDP-KKDTIQ----ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 740
Q+ + +I AL++ PTRELA+Q +H +R ++ GG + +
Sbjct: 62 NQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKA 121
Query: 741 IYQNVQVIIATPGRMIDLMD 800
+ + +++ATPGR++DLM+
Sbjct: 122 LKRGAHILVATPGRLLDLMN 141
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 95.9 bits (228), Expect = 1e-18
Identities = 50/136 (36%), Positives = 86/136 (63%), Gaps = 3/136 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F +F L LL + E + +P+P+Q A+IP+AL G+D+ A+ G+GKT A+ +P+L +
Sbjct: 184 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 243
Query: 582 -VDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
VD K + I+ALI++PTRELA QT + ++ T I+ + TGG + ++ + +
Sbjct: 244 LVDLKGARVEIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQAAMLRKV 303
Query: 753 VQVIIATPGRMIDLMD 800
V+I TPGR+++ ++
Sbjct: 304 PDVLIGTPGRLLEQLN 319
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 95.5 bits (227), Expect = 1e-18
Identities = 50/145 (34%), Positives = 87/145 (60%), Gaps = 11/145 (7%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+ F+E L+ L I + G+ KP+P+Q+ IPI LSG+D++A A+ G+GKT A+ IP++
Sbjct: 302 SSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMACAQTGSGKTAAFLIPII 361
Query: 576 EQVDPKKDTI-----------QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNL 722
+ K + +ALI+ PTREL +Q + +K + ++ + GGT+
Sbjct: 362 HTLLAKDRDLSDMSSANQVEPRALIISPTRELTIQIFDEARKFSKDSVLKCHIIYGGTST 421
Query: 723 RDDIMRIYQNVQVIIATPGRMIDLM 797
+ +I+Q V +++ATPGR++DL+
Sbjct: 422 SHQMKQIFQGVDILVATPGRLLDLV 446
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/127 (37%), Positives = 81/127 (63%), Gaps = 1/127 (0%)
Frame = +3
Query: 423 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDT 602
+++L G+ G+++PSPIQ +IP+ G D++ RAK+GTGKT +CI LE +D +
Sbjct: 5 QKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDIDISS 64
Query: 603 IQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPG 779
+Q LI+ PTRE+A+Q +Q+ + + D++V V GG + +D ++ N Q+ + PG
Sbjct: 65 VQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKV-NNCQIAVGAPG 123
Query: 780 RMIDLMD 800
R+ L+D
Sbjct: 124 RIRHLID 130
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/133 (36%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N F E L L + + + P+P+Q +IP+AL GKD+L A+ GTGKT A+ IP++
Sbjct: 2 NSFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLI 61
Query: 576 EQVDPKKDTIQALIVVPTRELALQ-TSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
++ + + AL++VPTRELA Q T++I L K++ +++ + GG + + ++ +
Sbjct: 62 AKLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLNQLQRR 121
Query: 753 VQVIIATPGRMID 791
+++I TPGR+ID
Sbjct: 122 PRIVIGTPGRIID 134
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 578
F F L L+ + +G+ P+PIQE ++P AL+G+D+L A GTGKT A+ +P+L
Sbjct: 58 FARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLHR 117
Query: 579 ---QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQ 749
Q + + T++AL+V PTREL Q + LA+ +R GG + +++
Sbjct: 118 LLLQGESARGTLRALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQTVQLRT 177
Query: 750 NVQVIIATPGRMID 791
V +++A PGR++D
Sbjct: 178 GVDIVLACPGRLLD 191
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 3/136 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L + I E G+ P+PIQ +IP+ L G+DVL A+ GTGKT ++ +P+++
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 582 VDPKKDTI---QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ ++ ++LI+ PTRELALQ ++ ++ ++ + + GG ++ D + +
Sbjct: 285 LSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVLSKG 344
Query: 753 VQVIIATPGRMIDLMD 800
V V+IATPGR+IDL D
Sbjct: 345 VDVLIATPGRLIDLFD 360
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 5/154 (3%)
Frame = +3
Query: 354 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 533
++ + ++ + + F E L EL+ + +G P IQ ++P ++G+D+L RA+
Sbjct: 132 EQALTAAEQIEVAESTFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRAR 191
Query: 534 NGTGKTGAYCIPVLEQVDPKK-----DTIQALIVVPTRELALQTSQICIELAKHTDIRVM 698
G+GKT + +P+L ++ +K + L++VPTRELA+Q + L D+R+
Sbjct: 192 TGSGKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGDSLDLRLS 251
Query: 699 VTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 800
V GG I + + + V+IATPGR++DL+D
Sbjct: 252 VVVGGVPYGRQIAALQRGIDVLIATPGRLVDLID 285
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/135 (33%), Positives = 76/135 (56%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+ F ++ L ELL I +E P+ +Q+ IP L KD++ +++ G+GKT A+ IP+
Sbjct: 4 SNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPIC 63
Query: 576 EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
+ VD ++ QAL++VPTRELA+Q + + + ++V G + Q
Sbjct: 64 QLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKT 123
Query: 756 QVIIATPGRMIDLMD 800
V++ TPGR+ID M+
Sbjct: 124 HVVVGTPGRIIDHME 138
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 95.5 bits (227), Expect = 1e-18
Identities = 46/139 (33%), Positives = 82/139 (58%), Gaps = 5/139 (3%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F + L + +L + KG+ P+PIQE +IP L G+D+L A+ GTGKT A+ +P ++
Sbjct: 3 QFSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSID 62
Query: 579 QVDPKKDTI-----QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
++ + I + L++ PTREL Q + + ++V GGT++ D ++
Sbjct: 63 RLREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKL 122
Query: 744 YQNVQVIIATPGRMIDLMD 800
++ ++IATPGR++DL+D
Sbjct: 123 HRGTDILIATPGRLLDLID 141
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/138 (34%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F + L + + I E + KP+ +QE +IP+ L K+V+ A+ GTGKT A+ +P++
Sbjct: 2 QFSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIIN 61
Query: 579 QVDPKKDT------IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 740
+ K+D I+AL++ PTRELA+Q + +K++++R GG +L
Sbjct: 62 LLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEI 121
Query: 741 IYQNVQVIIATPGRMIDL 794
+ + V +++ATPGR+IDL
Sbjct: 122 LAKGVDILVATPGRLIDL 139
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 95.5 bits (227), Expect = 1e-18
Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Frame = +3
Query: 366 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 545
+TSDV + F L+R+++ G+ + + P+ IQ A+IPIAL+G D+L ++K+GTG
Sbjct: 15 RTSDVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTG 74
Query: 546 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA-KHTDIRVMVTTGGTNL 722
KT Y + L+ + L+++PTRELALQ I L K +V GGT++
Sbjct: 75 KTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDV 134
Query: 723 RDDIMRIYQNVQVIIATPGRMIDLMDXQV 809
D ++ +N V I TPGR++ L + V
Sbjct: 135 TRDREKL-RNCHVAIGTPGRLLQLHEKGV 162
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 95.1 bits (226), Expect = 2e-18
Identities = 51/159 (32%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Frame = +3
Query: 327 KSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS 506
KSK + K + +S +TD E++ L E+ + E G+ K + IQ SIP+ L
Sbjct: 61 KSKEENEEKTKGTTSSFLTDI---EYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLM 117
Query: 507 GKDVLARAKNGTGKTGAYCIPVLEQVD----PKKDTIQALIVVPTRELALQTSQICIELA 674
GKD++A+A+ G+GKT A+ IP++E ++ ++ A+I+ PTRELA+QT + ++
Sbjct: 118 GKDIMAKARTGSGKTLAFLIPIVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKIL 177
Query: 675 KHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMID 791
H++ + GG++ + + + + +++ATPGR++D
Sbjct: 178 AHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGRLLD 216
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 95.1 bits (226), Expect = 2e-18
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +3
Query: 366 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 545
KT VT+ F L LL + G+ + IQ +IP L+GKDVL A+ GTG
Sbjct: 5 KTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTG 64
Query: 546 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNL 722
KT A+ +P L ++D Q +++ PTRELA+Q ++ K +RV GG +
Sbjct: 65 KTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSY 124
Query: 723 RDDIMRIYQNVQVIIATPGRMID 791
++ + QV++ TPGR++D
Sbjct: 125 GPQFQQLERGAQVVVGTPGRLMD 147
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 95.1 bits (226), Expect = 2e-18
Identities = 50/132 (37%), Positives = 78/132 (59%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
+E LK EL+ I + GWEKPSPIQ+ +I I GK+++ +++NG+GKT + I L +
Sbjct: 22 WESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSIGTLAR 81
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+ T + +IV PTRELA+QT L +T R V GG +L D+ + + +
Sbjct: 82 LRLTSKTTELIIVSPTRELAIQTENTLKSLGANT--RACV--GGNSLGADVKALQKGIHC 137
Query: 762 IIATPGRMIDLM 797
+ TPGR++ L+
Sbjct: 138 VSGTPGRILQLL 149
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 95.1 bits (226), Expect = 2e-18
Identities = 48/131 (36%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE L EL I +G+ P+PIQ +IP L+G+D++A +K G+GKT A+ IP++ +
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 582 VDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNV 755
+ I+ LI++PTRELALQ + + L K +DI+ + GG + N
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFESLASNP 131
Query: 756 QVIIATPGRMI 788
++I TPGR++
Sbjct: 132 DILICTPGRVL 142
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/116 (37%), Positives = 70/116 (60%)
Frame = +3
Query: 453 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 632
GW KP+ IQ +IP+AL G+D++ A+ G+GKTGA+ +P+L + + AL++ PTR
Sbjct: 32 GWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTR 91
Query: 633 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 800
ELA Q S+ L ++ V GG + + + + +IIATPGR+ID ++
Sbjct: 92 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLE 147
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/116 (37%), Positives = 70/116 (60%)
Frame = +3
Query: 453 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 632
GW KP+ IQ +IP+AL G+D++ A+ G+GKTGA+ +P+L + + AL++ PTR
Sbjct: 43 GWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTR 102
Query: 633 ELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 800
ELA Q S+ L ++ V GG + + + + +IIATPGR+ID ++
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLE 158
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 94.7 bits (225), Expect = 2e-18
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 4/139 (2%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
N F++ L + L G+ E G+ KP+ IQ +I + L+GKD+L A+ G+GKT A+ IP+L
Sbjct: 51 NSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPIL 110
Query: 576 EQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
E++ K+ D + AL++ PTRELA Q + + +H + + GG +L+ + R+
Sbjct: 111 ERLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLKFERNRM 170
Query: 744 YQNVQVIIATPGRMIDLMD 800
Q ++I TPGR++ MD
Sbjct: 171 DQ-CNIVIGTPGRILQHMD 188
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 94.7 bits (225), Expect = 2e-18
Identities = 46/140 (32%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
+EF+ F L ++ + KG+++P+PIQ+ IP ++G D+L A+ GTGKT A+ +P++
Sbjct: 2 SEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPII 61
Query: 576 -----EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMR 740
++D K + ++LI+ PTRELA Q Q + + ++ V GG + +
Sbjct: 62 NKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDS 121
Query: 741 IYQNVQVIIATPGRMIDLMD 800
I + +++ATPGR++DL++
Sbjct: 122 IELGLDILVATPGRLLDLIE 141
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 94.7 bits (225), Expect = 2e-18
Identities = 48/133 (36%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
FE L E+L + + G P+PIQ+ SIP + G+D+L A+ GTGKTG + +PVL +
Sbjct: 3 FEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLHK 62
Query: 582 V-DPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ + ++ I +AL++ PTRELA Q Q + AK+ ++ GG + + +N
Sbjct: 63 IAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKRN 122
Query: 753 VQVIIATPGRMID 791
+++ATPGR++D
Sbjct: 123 WDIVVATPGRLLD 135
>UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-PA
- Drosophila melanogaster (Fruit fly)
Length = 826
Score = 94.7 bits (225), Expect = 2e-18
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Frame = +3
Query: 351 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 530
+D + K +++ T +F +F L ++ + E + P+ +Q SI AL GKDVL A
Sbjct: 57 QDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAA 116
Query: 531 KNGTGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDIRVM 698
G+GKT A+ IPVLE + K D + A+I+ PTRELA Q + ++ KH D
Sbjct: 117 ITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAG 176
Query: 699 VTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMD 800
+ GG NL+ + R+ Q ++I TPGR++ MD
Sbjct: 177 LIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMD 209
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 94.7 bits (225), Expect = 2e-18
Identities = 53/138 (38%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
++ F L +L GI GW++P+ IQEA +PIAL GKD+LA+A+ G+GKTGAY IP+++
Sbjct: 12 QWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGKTGAYLIPIVQ 71
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIEL-AKHTDIRVMVTTGG-TNLRDDIMRIYQN 752
++ T +ALI+ PTREL Q + EL K D+ + G DI +
Sbjct: 72 RILHIAST-RALIIGPTRELCSQIEAVVRELCVKCLDVVSIYELGSEVETEADI-----S 125
Query: 753 VQVIIATPGRMIDLMDXQ 806
++I TPGR+++ + +
Sbjct: 126 ASIVIGTPGRILNALKSE 143
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 94.7 bits (225), Expect = 2e-18
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 3/139 (2%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+FE + LK ++ + G+ +P+ IQ+ IP L + V+ +++ GTGKT AY +P+L
Sbjct: 5 KFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLN 64
Query: 579 QVDPKKDTIQALIVVPTRELALQTSQICIELA---KHTDIRVMVTTGGTNLRDDIMRIYQ 749
++DP KD +Q +I PTRELA Q Q +++ + + IR GGT+ + I ++
Sbjct: 65 KIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKI 124
Query: 750 NVQVIIATPGRMIDLMDXQ 806
+++ TPGR+ DL+ Q
Sbjct: 125 QPHLVVGTPGRIADLIKEQ 143
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 94.7 bits (225), Expect = 2e-18
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Frame = +3
Query: 396 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 575
++FE+F L ELL + +KG+ +P+ IQ +IP A+ DVL A GTGKT A+ +P L
Sbjct: 4 SQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPAL 63
Query: 576 EQV----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRI 743
+ + K + L++ PTRELA+Q ++ ELA+ T + + TGG ++
Sbjct: 64 QHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVF 123
Query: 744 YQNVQVIIATPGRMI 788
N +++ATPGR++
Sbjct: 124 NTNQDLVVATPGRLL 138
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 94.7 bits (225), Expect = 2e-18
Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 2/129 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F E L+ LL GI ++ W P+ +Q +IP+AL G+D+LAR+ GTGKTGAY +P+L
Sbjct: 49 FAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARSGTGTGKTGAYLLPILHN 108
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTD--IRVMVTTGGTNLRDDIMRIYQNV 755
+K +LI+VPT+ELALQ +++ L+ H +R+ G + ++ N
Sbjct: 109 TLLRKGK-TSLILVPTKELALQITKVAKALSAHCGQAVRIQNIAGKESEVVTKAKLADNP 167
Query: 756 QVIIATPGR 782
++IATP R
Sbjct: 168 DIVIATPAR 176
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 575
F++F L + + E+ + P+PIQ +IP AL+G+DV+ A+ GTGKT ++ +P+L
Sbjct: 18 FQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILHR 77
Query: 576 ---EQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIY 746
++ P+ T + L++ PTREL+ Q +H + + GG + + +
Sbjct: 78 LLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSLM 137
Query: 747 QNVQVIIATPGRMIDLM 797
Q V+V++ATPGR++DL+
Sbjct: 138 QGVEVLVATPGRLLDLV 154
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/134 (33%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++ L + L+ G+ ++G KP+ IQ +IP+AL KDV+ ++ G+GKT AY +P+ ++
Sbjct: 5 FDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLPIFQK 64
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVT--TGGTNLRDDIMRIYQNV 755
+D K +QA+I+ PT ELA+Q ++ L+ ++ + V T G N++ I ++ +
Sbjct: 65 IDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKLKEKP 124
Query: 756 QVIIATPGRMIDLM 797
VI+ + GR+++L+
Sbjct: 125 HVIVGSSGRILELI 138
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 94.3 bits (224), Expect = 3e-18
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Frame = +3
Query: 348 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 527
P RR + T +F L LL I E+ +E P+PIQ SIP+ L G D++
Sbjct: 44 PSHRRSRDESAVLT---DFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGI 100
Query: 528 AKNGTGKTGAYCIPVLEQV-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 692
A+ GTGKT A+ +P+L ++ P +AL++ PTRELA Q + K T
Sbjct: 101 AQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPS 160
Query: 693 VMVTTGGTNLRDDIMRIYQNVQVIIATPGRMID 791
V V GG R+ V +++ATPGR++D
Sbjct: 161 VAVVIGGAKPGPQARRMESGVDLLVATPGRLLD 193
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 94.3 bits (224), Expect = 3e-18
Identities = 48/120 (40%), Positives = 76/120 (63%), Gaps = 12/120 (10%)
Frame = +3
Query: 465 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV-DPKKDTI-----------Q 608
P+P+Q +P+ L+G+D LA A+ G+GKT A+ +P+L+ V DP K + +
Sbjct: 229 PTPVQRFLLPVLLAGRDALATAQTGSGKTAAFMLPILKTVLDPSKGPVLGVAADGKPAPR 288
Query: 609 ALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMI 788
A++VVPT ELA Q ++ A T +RV +T GG N+R D+M++ V V++ATPGR++
Sbjct: 289 AIVVVPTHELAQQILFEGMKFATGTSVRVHLTHGGVNVRHDLMQLRSGVSVLVATPGRLL 348
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 94.3 bits (224), Expect = 3e-18
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 3/134 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F +F LK ELL I + G+E PS +Q IP A+ G DV+ +AK+G GKT + + L+Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGTNLR--DDIMRIYQN 752
++P + AL++ TRELA Q + + + D +V V GG N++ D+++ +
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLK-NEC 166
Query: 753 VQVIIATPGRMIDL 794
+++ TPGR++ L
Sbjct: 167 PHIVVGTPGRVLAL 180
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 93.9 bits (223), Expect = 4e-18
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Frame = +3
Query: 393 GNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 572
G F + L +L + + P+PIQ +IP L G+DVL A+ GTGKT A+ +P
Sbjct: 7 GLSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPA 66
Query: 573 LEQVDPKKDTIQALIVVPTRELALQTSQICIE--LAKHTDIRVMVTTGGTNLRDDIMRIY 746
L ++D Q L+V PTRELA+Q ++ +E AK + V GG + +
Sbjct: 67 LAKIDASVKQTQVLVVTPTRELAIQVAE-ALEGFAAKMRGVGVATVYGGAPFGPQVKALK 125
Query: 747 QNVQVIIATPGRMIDLMDXQV 809
Q +++ TPGR+IDL++ V
Sbjct: 126 QGTAIVVGTPGRLIDLLNKNV 146
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 93.9 bits (223), Expect = 4e-18
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Frame = +3
Query: 375 DVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTG 554
D T EFEE ++ I ++G+ KP+ IQ PIA+SG+D++ A+ G+GKT
Sbjct: 150 DQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTL 209
Query: 555 AYCIPVLEQVD-----PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTN 719
AY +P + ++ + D AL++ PTRELA Q Q+ IE +T +R GG
Sbjct: 210 AYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAP 269
Query: 720 LRDDIMRIYQNVQVIIATPGRMIDLMD 800
+ + V+++IATPGR+ID ++
Sbjct: 270 KGQQARDLERGVEIVIATPGRLIDFLE 296
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 93.5 bits (222), Expect = 6e-18
Identities = 48/133 (36%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F + L ++ I E G+E P+PIQ +IP AL+G+DVL A+ GTGKT ++ +P++
Sbjct: 13 FADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITM 72
Query: 582 V---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQN 752
+ + ++L++ PTRELA Q ++ AKH + + GG + ++ I +
Sbjct: 73 LARGRARARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDKG 132
Query: 753 VQVIIATPGRMID 791
V V+IATPGR++D
Sbjct: 133 VDVLIATPGRLLD 145
>UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein
precursor; n=1; Ralstonia metallidurans CH34|Rep:
DEAD/DEAH box helicase-like protein precursor -
Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM
2839)
Length = 227
Score = 93.5 bits (222), Expect = 6e-18
Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Frame = +3
Query: 393 GNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 572
G F L L + + E GW +P+Q A +P AL+G+D++ +A G+G+T A+ + +
Sbjct: 15 GTLFSALPLAPALQVTLTELGWHAINPLQAAMLPEALAGRDLIVQASPGSGRTVAFTVAL 74
Query: 573 LEQVDPKKDTIQALIVVPTRELALQTSQI---CIELAKHTDIRVMVTTGGTNLRDDIMRI 743
L +DP++ +QAL++ PTRE +Q C+ A+H ++V+ G +R I +
Sbjct: 75 LHHLDPRRFDVQALVLCPTRERVQHVAQCIRDCVRAARH--VKVVALMHGAAMRPQIDSL 132
Query: 744 YQNVQVIIATPGRMIDLMD 800
V++ TPGR++D +D
Sbjct: 133 IHGAHVVVGTPGRVVDHLD 151
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 93.5 bits (222), Expect = 6e-18
Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Frame = +3
Query: 384 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 563
D+ FE L LL + + GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY
Sbjct: 3 DSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYA 62
Query: 564 IPVLEQVDPKKDT-------IQALIVVPTRELALQTSQICIELAKH--TDIRVMVTTGGT 716
IP+L+ + +K T ++ L++VPT+ELA Q + +LA + D+RV +
Sbjct: 63 IPMLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDVRVANVSAAE 122
Query: 717 NLRDDIMRIYQNVQVIIATPGRMI 788
+ + + V++ TP R++
Sbjct: 123 DSVSQRAVLMEKPDVVVGTPSRIL 146
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 93.1 bits (221), Expect = 8e-18
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Frame = +3
Query: 369 TSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGK 548
T+D TD F + + + +L + G+ P+PIQ +IP AL G+D+L A+ G+GK
Sbjct: 35 TTDATDENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGK 94
Query: 549 TGAYCIPVLEQVDPKKD---TIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGGT 716
T A+ IPVL+++ +ALI+ PTRELA Q +K + + GG
Sbjct: 95 TAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGA 154
Query: 717 NLRDDIMRIYQNVQVIIATPGRMID 791
I + + VQVI+ATPGR++D
Sbjct: 155 PYNGQITALKKGVQVIVATPGRLLD 179
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 93.1 bits (221), Expect = 8e-18
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 8/142 (5%)
Frame = +3
Query: 399 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 578
+F+ L L+ G+ + P+PIQ +IP L+G+DVL A+ GTGKT A+ +P+L+
Sbjct: 72 DFDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLD 131
Query: 579 QV-----DPKKDTIQALIVVPTRELALQTSQICIELAKHTD---IRVMVTTGGTNLRDDI 734
+ P T + LI+ PTREL SQIC L T+ +++ V GG + I
Sbjct: 132 ALMKAGTKPAPRTCRGLILAPTRELV---SQICESLRAFTEGSHLKLQVIVGGVAIGPQI 188
Query: 735 MRIYQNVQVIIATPGRMIDLMD 800
R + +I+ATPGR+IDL+D
Sbjct: 189 KRAERGADLIVATPGRLIDLLD 210
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 93.1 bits (221), Expect = 8e-18
Identities = 43/130 (33%), Positives = 73/130 (56%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F L EL + GW+ P+ IQ +P AL G+D++A A+ G+GKT A+ +P+L++
Sbjct: 53 FASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQR 112
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+ + ALI+ PTREL LQ SQ + + + V+ GG + + + + V
Sbjct: 113 LLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPHV 172
Query: 762 IIATPGRMID 791
++ +PGR++D
Sbjct: 173 VVGSPGRVVD 182
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 93.1 bits (221), Expect = 8e-18
Identities = 45/130 (34%), Positives = 82/130 (63%)
Frame = +3
Query: 402 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 581
F++ ++ +L I +K +E+P+ IQ+ +IP+ L GKD++ A G+GKT A+ ++++
Sbjct: 4 FKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQK 63
Query: 582 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
++ K + I+AL++ PTRELA Q E ++H +RV GG + I ++ + V
Sbjct: 64 IE-KGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQL-ERADV 121
Query: 762 IIATPGRMID 791
++ATPGR++D
Sbjct: 122 VVATPGRLLD 131
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 93.1 bits (221), Expect = 8e-18
Identities = 48/133 (36%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Frame = +3
Query: 417 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DP 590
L+ ++ + + G++ P+PIQ+ SIP+ SG+D++A A+ G+GKT A+ +P+L ++ DP
Sbjct: 252 LRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDP 311
Query: 591 KKDTI---QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQV 761
+ + Q +IV PTRELA+Q + A + +++ + GGT+ R I + V
Sbjct: 312 HELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHV 371
Query: 762 IIATPGRMIDLMD 800
+IATPGR++D +D
Sbjct: 372 VIATPGRLLDFVD 384
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 92.7 bits (220), Expect = 1e-17
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Frame = +3
Query: 354 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 533
D + +T DV F L ++ G+ G++KPSPIQ +IP+ G D++ ++K
Sbjct: 10 DAKERTKDVILDENISFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSK 69
Query: 534 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD-IRVMVTTG 710
+GTGKT + LE V+ KD +Q LI+VPTRE+A+Q + + H + +++ G
Sbjct: 70 SGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIG 129
Query: 711 GTNLRDDIMRIYQNVQVIIATPGRMIDLM 797
G L DD+ + + + PGR+ L+
Sbjct: 130 GRPLEDDLKK-SSKCHIAVGAPGRVKHLL 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,704,096
Number of Sequences: 1657284
Number of extensions: 12698357
Number of successful extensions: 35387
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 32532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34273
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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