Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_H11
(347 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 87 6e-17
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 81 4e-15
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 79 2e-14
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 74 6e-13
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 66 2e-10
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 64 5e-10
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 60 1e-08
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 52 2e-06
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 52 4e-06
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 52 4e-06
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 48 4e-05
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 48 6e-05
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 46 1e-04
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 45 4e-04
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 42 0.004
UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2; ... 35 0.44
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 33 1.0
UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1; ... 33 1.4
UniRef50_UPI00015B5E90 Cluster: PREDICTED: similar to AT24407p; ... 31 4.1
UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4; ... 31 4.1
UniRef50_A5GSE8 Cluster: Permease of the major facilitator super... 31 5.5
UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropy... 30 9.5
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 87.4 bits (207), Expect = 6e-17
Identities = 45/62 (72%), Positives = 47/62 (75%)
Frame = +3
Query: 87 KXF*LRRGGKXPNRSK*RXTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 266
K F L+ K K + NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE
Sbjct: 9 KDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 68
Query: 267 VK 272
VK
Sbjct: 69 VK 70
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 81.4 bits (192), Expect = 4e-15
Identities = 42/62 (67%), Positives = 45/62 (72%)
Frame = +3
Query: 87 KXF*LRRGGKXPNRSK*RXTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 266
K F L K K + NVKFKVRCSR+LYTLVITDKEKAEKLKQSLPPGL VKE
Sbjct: 9 KDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGLAVKE 68
Query: 267 VK 272
+K
Sbjct: 69 LK 70
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 79.4 bits (187), Expect = 2e-14
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +3
Query: 153 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEVK 272
NVKFKVRCS++LYTLVITDKEKAEKLKQSLPPGL VKE+K
Sbjct: 380 NVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGLSVKELK 419
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 74.1 bits (174), Expect = 6e-13
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3
Query: 87 KXF*LRRGGKXPNRSK*RXTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 266
K F ++ K K + N KFKVRC+ +LYTLV+ DK+KAEKLKQSLPPG+QVKE
Sbjct: 9 KDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSLPPGIQVKE 68
Query: 267 VK 272
+K
Sbjct: 69 LK 70
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 65.7 bits (153), Expect = 2e-10
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 87 KXF*LRRGGKXPNRSK*RXTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 266
K F L K K + + VKFKVRCSR+LYTL + D+EKA+KLKQSLPPGL V++
Sbjct: 9 KDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLPPGLSVQD 68
Query: 267 V 269
+
Sbjct: 69 L 69
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 64.5 bits (150), Expect = 5e-10
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +3
Query: 102 RRGGKXPNRSK*RXTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 269
RR R K +KFKVRC RFLYTLV+ D +KA+KLKQSLPP L++ +V
Sbjct: 16 RRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQSLPPSLKIADV 71
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 60.1 bits (139), Expect = 1e-08
Identities = 34/61 (55%), Positives = 39/61 (63%)
Frame = +3
Query: 87 KXF*LRRGGKXPNRSK*RXTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 266
K F L K K + NVKFKVRCSR LYTLVITDKEKAEKLKQ L +Q++
Sbjct: 25 KDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLKQ-LKKAVQIQR 83
Query: 267 V 269
+
Sbjct: 84 L 84
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +3
Query: 147 LXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 269
+ KFKVR SR+ YTLV+ D KA+KL+QSLPP L++K +
Sbjct: 38 IKQTKFKVRGSRYQYTLVVNDAAKAKKLQQSLPPTLEIKNL 78
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 153 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 269
N KFKVRC+++LYT + DK KAE+LK+++P + V E+
Sbjct: 31 NTKFKVRCAKYLYTYICADKAKAEELKKAIPKDIHVVEI 69
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 51.6 bits (118), Expect = 4e-06
Identities = 20/33 (60%), Positives = 30/33 (90%)
Frame = +3
Query: 159 KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 257
KFKVRCSR+LYTLV+ DK+KA+K+++S+ P ++
Sbjct: 33 KFKVRCSRYLYTLVVNDKKKADKIERSIHPSVK 65
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 48.0 bits (109), Expect = 4e-05
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +3
Query: 153 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 269
+ KFK+RC R LYTL + D+ KA+K+ QSLP +++ ++
Sbjct: 44 DTKFKIRCPRMLYTLTVDDRTKADKIVQSLPSSIKIIKI 82
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 159 KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 269
KFK+R SR+LYTL++ D KA+KL QSLPP V ++
Sbjct: 42 KFKLRGSRYLYTLIVNDAGKAKKLLQSLPPTFNVNKL 78
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3
Query: 159 KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 269
KFKVR S LYTLVI D KA+KL QSLPP L+V +
Sbjct: 42 KFKVRGSSSLYTLVINDAGKAKKLIQSLPPTLKVNRL 78
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 44.8 bits (101), Expect = 4e-04
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +3
Query: 126 RSK*RXTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 269
+ K + L + KFKVRCSR+LYT + ++ KA K++ ++P L+ K +
Sbjct: 27 KKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAKVEATIPSNLEKKVI 74
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 126 RSK*RXTLXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 257
+SK + K K+R ++LYT+V DK+KAE+++ SL P L+
Sbjct: 29 KSKTKKNTIITKLKLRTKKYLYTMVFADKKKAERIENSLLPSLK 72
>UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 162
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1
Query: 145 PXRMSSSRFDAQGSCTPWSSLTKRRLRNLSR 237
P SSR DA +CTP S+T RRLR+ SR
Sbjct: 109 PPTSPSSRSDAPSTCTPLFSMTLRRLRSSSR 139
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 159 KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQV 260
KFK+R ++FLYTLV+ K E ++ S+P L+V
Sbjct: 34 KFKLRTTKFLYTLVVKPK-FVELVQNSIPESLEV 66
>UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L38e,
putative - Trichomonas vaginalis G3
Length = 98
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 153 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQV 260
N KFK+R +++LYTL + K E ++ S+P L+V
Sbjct: 56 NTKFKLRTTKYLYTLTVKPK-FVELVQNSIPESLEV 90
>UniRef50_UPI00015B5E90 Cluster: PREDICTED: similar to AT24407p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
AT24407p - Nasonia vitripennis
Length = 418
Score = 31.5 bits (68), Expect = 4.1
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = +3
Query: 21 DPLTVLVENXSSSTCRVKSKISKXF*LRRGGKXPNRSK*RXTLXNVKFKV------RCSR 182
D L L EN S ++ +KI L + K N T+ ++V R
Sbjct: 39 DNLIALGENFGSKILKIDAKIQ----LSKNSKTENLYMIVKTVMETDYEVDWTTLLRKEI 94
Query: 183 FLYTLVITDKEKAEKLKQSLPPGLQVKEV 269
F+YT +IT EK E +++ L GL++K +
Sbjct: 95 FMYTYIITQYEKIE-VQRGLKRGLEIKSI 122
>UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 445
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 147 LXNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 269
+ N+++ V C R YTL D E++K+ L L++ E+
Sbjct: 49 ILNIEYSVLCQRLKYTLSSLDYSSPEQIKEQLIDALKLAEL 89
>UniRef50_A5GSE8 Cluster: Permease of the major facilitator
superfamily; n=1; Synechococcus sp. RCC307|Rep: Permease
of the major facilitator superfamily - Synechococcus sp.
(strain RCC307)
Length = 522
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = -2
Query: 265 SLTWRPGGKLCLSFSAFSLSVMT---RVYRNLEHRTLNLTFX--RVLLYFDRFGXFPPRL 101
++ W +C F FS S++ + + + LTF V+L+F RF PP L
Sbjct: 200 AIDWLTFYLICAGFGIFSCSLVVGNQQEWFQSSFYIILLTFSLIHVILFFIRFASSPPLL 259
Query: 100 N*KXFDIFDF 71
N K F +F
Sbjct: 260 NPKVFSDINF 269
>UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L38E - Aeropyrum
pernix
Length = 67
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 156 VKFKVRCSRFLYTLVITDKEKAEKLKQ 236
VK K R R+LYTL + +++AE L+Q
Sbjct: 30 VKIKARTKRYLYTLKVPPEKEAEVLEQ 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,872,673
Number of Sequences: 1657284
Number of extensions: 2953730
Number of successful extensions: 6469
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6469
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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