Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H10
         (772 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB113650-1|BAD93185.1|  100|Homo sapiens prostate collagen tripl...    36   0.21 
BC069237-1|AAH69237.1|  624|Homo sapiens UBQLN2 protein protein.       30   8.0  
AL442081-1|CAC09446.1|  588|Homo sapiens hypothetical protein pr...    30   8.0  
AL354793-1|CAD13519.1|  624|Homo sapiens ubiquilin 2 protein.          30   8.0  
AF293385-1|AAG02474.1|  624|Homo sapiens PLIC-2 protein.               30   8.0  
AF189009-1|AAF17237.1|  624|Homo sapiens ubiquitin-like product ...    30   8.0  
AB015344-1|BAA34801.1|  408|Homo sapiens HRIHFB2157 protein.           30   8.0  

>AB113650-1|BAD93185.1|  100|Homo sapiens prostate collagen triple
           helix protein.
          Length = 100

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -2

Query: 771 PASPLSPLGXGTPVGPFGPCTPGG 700
           P  P SPLG G P+GP GP  P G
Sbjct: 52  PVGPASPLGPGFPIGPMGPGKPVG 75



 Score = 33.5 bits (73), Expect = 0.86
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 771 PASPLSPLGXGTPVGPFGPCTPGG 700
           P  P+ P+G G PVGP GP  P G
Sbjct: 61  PGFPIGPMGPGKPVGPKGPMLPLG 84


>BC069237-1|AAH69237.1|  624|Homo sapiens UBQLN2 protein protein.
          Length = 624

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 771 PASPLSPLGXGTPVGPFGPCTPGG 700
           P  P+ P+   TP+GP GP  P G
Sbjct: 497 PIGPIGPIVPFTPIGPIGPIGPTG 520


>AL442081-1|CAC09446.1|  588|Homo sapiens hypothetical protein
           protein.
          Length = 588

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 771 PASPLSPLGXGTPVGPFGPCTPGG 700
           P  P+ P+   TP+GP GP  P G
Sbjct: 461 PIGPIGPIVPFTPIGPIGPIGPTG 484


>AL354793-1|CAD13519.1|  624|Homo sapiens ubiquilin 2 protein.
          Length = 624

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 771 PASPLSPLGXGTPVGPFGPCTPGG 700
           P  P+ P+   TP+GP GP  P G
Sbjct: 497 PIGPIGPIVPFTPIGPIGPIGPTG 520


>AF293385-1|AAG02474.1|  624|Homo sapiens PLIC-2 protein.
          Length = 624

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 771 PASPLSPLGXGTPVGPFGPCTPGG 700
           P  P+ P+   TP+GP GP  P G
Sbjct: 497 PIGPIGPIVPFTPIGPIGPIGPTG 520


>AF189009-1|AAF17237.1|  624|Homo sapiens ubiquitin-like product
           Chap1/Dsk2 protein.
          Length = 624

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 771 PASPLSPLGXGTPVGPFGPCTPGG 700
           P  P+ P+   TP+GP GP  P G
Sbjct: 497 PIGPIGPIVPFTPIGPIGPIGPTG 520


>AB015344-1|BAA34801.1|  408|Homo sapiens HRIHFB2157 protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 771 PASPLSPLGXGTPVGPFGPCTPGG 700
           P  P+ P+   TP+GP GP  P G
Sbjct: 281 PIGPIGPIVPFTPIGPIGPIGPTG 304


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,976,728
Number of Sequences: 237096
Number of extensions: 1930701
Number of successful extensions: 4762
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4726
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)