Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H10
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical pr...    32   0.39 
Z81015-2|CAB02660.1|  411|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    28   8.5  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    28   8.5  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    28   8.5  

>Z70207-1|CAA94128.1|  291|Caenorhabditis elegans Hypothetical
           protein F15A2.1 protein.
          Length = 291

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -2

Query: 771 PASPLSPLGXGTPVGPFGPCTPGG 700
           PA P  P G   PVGP GP  P G
Sbjct: 183 PAGPAGPEGKDGPVGPHGPAGPAG 206


>Z81015-2|CAB02660.1|  411|Caenorhabditis elegans Hypothetical
           protein C11E4.3 protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +2

Query: 257 CFR--ISVIACVCAVLSLLVHTYNY 325
           CFR  + V  CVCAVL  L H++++
Sbjct: 376 CFRFYVYVCVCVCAVLHFLPHSFSF 400


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +2

Query: 332  KESGSDKLNGNARDVLENILDDKLEEKIEAYLSAFTGTTSHRLKRDAMLKPSAVQED 502
            K+   DKL   A   L+   DDKL+++ +A L         RLK+DA  K    ++D
Sbjct: 7274 KKEKDDKLKHEADAKLQKEKDDKLKQEADAKLKK---EKDDRLKKDADAKLQKEKDD 7327


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +2

Query: 332  KESGSDKLNGNARDVLENILDDKLEEKIEAYLSAFTGTTSHRLKRDAMLKPSAVQED 502
            K+   DKL   A   L+   DDKL+++ +A L         RLK+DA  K    ++D
Sbjct: 7294 KKEKDDKLKHEADAKLQKEKDDKLKQEADAKLKK---EKDDRLKKDADAKLQKEKDD 7347


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +2

Query: 332  KESGSDKLNGNARDVLENILDDKLEEKIEAYLSAFTGTTSHRLKRDAMLKPSAVQED 502
            K+   DKL   A   L+   DDKL+++ +A L         RLK+DA  K    ++D
Sbjct: 7294 KKEKDDKLKHEADAKLQKEKDDKLKQEADAKLKK---EKDDRLKKDADAKLQKEKDD 7347


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,321,506
Number of Sequences: 27780
Number of extensions: 284506
Number of successful extensions: 1210
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)