Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H09
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    29   0.21 
Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.        28   0.37 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.5  

>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 11/38 (28%), Positives = 27/38 (71%)
 Frame = +1

Query: 187 ILARRYILEKXYYLLYTVNINLHRYKICLKKNATKMST 300
           +L R+Y+L++ Y+L   +N+ +H+ ++ L++ +  +ST
Sbjct: 26  VLQRQYLLQQQYHLQAQLNL-VHQQQLALEQQSAAIST 62


>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 561 EMFLETIVKETYAFTSSNKRKVISKKDL 644
           ++FLE ++++  A+T   KRK ++  D+
Sbjct: 60  KVFLENVIRDAVAYTEHAKRKTVTAMDV 87


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
 Frame = +3

Query: 261 QNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEAENNKLEFELNSEEQVHEKK- 437
           + + +EE  +  ++    E  ES L+N   KFA  +A     N+   +   +    EK+ 
Sbjct: 354 EKLVKEEIKQYDELVSAKESKESTLKNSLDKFAKVQANMRATNERRKKTLEQIAAEEKRL 413

Query: 438 -QKTEVIRSTKLPI----ARIKNIMKMDPDVNIVCSDAVFLVTKATEMFLE 575
            +  +V +  K  I    A+I+++ +   +V    +  +  +   T++ LE
Sbjct: 414 LELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLATLKDETKVLLE 464


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,904
Number of Sequences: 2352
Number of extensions: 9405
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)