Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H08
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    25   0.74 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    24   1.7  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   3.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 25.0 bits (52), Expect = 0.74
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +3

Query: 249 PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWS 359
           P   D   W+  +DE   G   +   D    G+ +WS
Sbjct: 305 PYKYDGTNWVSYDDEQSIGLKAKYAKDNGLAGVAVWS 341


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +3

Query: 240 KAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWS 359
           K P   +D   W+G +DE       +   D    G+++W+
Sbjct: 315 KVPYKYKDDQ-WIGYDDEESVALKVQFAKDHNMAGLMIWT 353


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +3

Query: 225 FLRYLKAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWS 359
           FL  +K P    D+  W+G ++E           ++   G+ +WS
Sbjct: 308 FLDDMKVPYMYEDTF-WIGYDNEQSVTIKTEYAKEKNLAGVFIWS 351


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 207 SFLLDFFLRYLKAPPSSRDSAAWLGQE 287
           SFL D   RY   P  S  SAA+  +E
Sbjct: 28  SFLRDDVERYPSGPELSDRSAAYTNRE 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,438
Number of Sequences: 336
Number of extensions: 3353
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)