Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H08
         (830 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p pro...   294   8e-80
AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p pro...   294   8e-80
AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB...   294   8e-80
AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA...   294   8e-80
AY075472-1|AAL68284.1|  692|Drosophila melanogaster RE32029p pro...    29   7.8  
AE014134-1125|AAG22419.2|  692|Drosophila melanogaster CG31634-P...    29   7.8  

>BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p
           protein.
          Length = 541

 Score =  294 bits (722), Expect = 8e-80
 Identities = 136/256 (53%), Positives = 182/256 (71%), Gaps = 2/256 (0%)
 Frame = +3

Query: 69  VEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAP 248
           V+V+  +++HT+ LNEDAL  +L+RDEVKD           +R GKSFLLDFFLRY+ + 
Sbjct: 6   VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSK 65

Query: 249 PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-NDQKVAVVLMDTQGT 425
               D+  WLG E +PL GF WR G +R TTGI++WS+  +  + N  K+A++L+DTQG 
Sbjct: 66  YVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGA 125

Query: 426 FDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQ 605
           FD+ STVRD +T+FALST+LSS+QIYNL +NI+EDDLQHL LFTEYGRLA  D  +  FQ
Sbjct: 126 FDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQ 185

Query: 606 VLMFLVRDWAYPYQHAFGAEGGEXLLIKRLXITNNXHAELRELXXRIRSCFKSVSCFLMP 785
            L FLVRDW++PY+  +GA GG+ +L +RL +++  H EL+ L   I SCF  V+CFLMP
Sbjct: 186 RLQFLVRDWSFPYEAEYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMP 245

Query: 786 HPGF-VVSXQNFNGQL 830
           HPG  V +   F+G+L
Sbjct: 246 HPGLNVATNPKFDGRL 261


>AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p
           protein.
          Length = 541

 Score =  294 bits (722), Expect = 8e-80
 Identities = 136/256 (53%), Positives = 182/256 (71%), Gaps = 2/256 (0%)
 Frame = +3

Query: 69  VEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAP 248
           V+V+  +++HT+ LNEDAL  +L+RDEVKD           +R GKSFLLDFFLRY+ + 
Sbjct: 6   VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSK 65

Query: 249 PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-NDQKVAVVLMDTQGT 425
               D+  WLG E +PL GF WR G +R TTGI++WS+  +  + N  K+A++L+DTQG 
Sbjct: 66  YVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGA 125

Query: 426 FDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQ 605
           FD+ STVRD +T+FALST+LSS+QIYNL +NI+EDDLQHL LFTEYGRLA  D  +  FQ
Sbjct: 126 FDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQ 185

Query: 606 VLMFLVRDWAYPYQHAFGAEGGEXLLIKRLXITNNXHAELRELXXRIRSCFKSVSCFLMP 785
            L FLVRDW++PY+  +GA GG+ +L +RL +++  H EL+ L   I SCF  V+CFLMP
Sbjct: 186 RLQFLVRDWSFPYEAEYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMP 245

Query: 786 HPGF-VVSXQNFNGQL 830
           HPG  V +   F+G+L
Sbjct: 246 HPGLNVATNPKFDGRL 261


>AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB,
           isoform B protein.
          Length = 541

 Score =  294 bits (722), Expect = 8e-80
 Identities = 136/256 (53%), Positives = 182/256 (71%), Gaps = 2/256 (0%)
 Frame = +3

Query: 69  VEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAP 248
           V+V+  +++HT+ LNEDAL  +L+RDEVKD           +R GKSFLLDFFLRY+ + 
Sbjct: 6   VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSK 65

Query: 249 PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-NDQKVAVVLMDTQGT 425
               D+  WLG E +PL GF WR G +R TTGI++WS+  +  + N  K+A++L+DTQG 
Sbjct: 66  YVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGA 125

Query: 426 FDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQ 605
           FD+ STVRD +T+FALST+LSS+QIYNL +NI+EDDLQHL LFTEYGRLA  D  +  FQ
Sbjct: 126 FDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQ 185

Query: 606 VLMFLVRDWAYPYQHAFGAEGGEXLLIKRLXITNNXHAELRELXXRIRSCFKSVSCFLMP 785
            L FLVRDW++PY+  +GA GG+ +L +RL +++  H EL+ L   I SCF  V+CFLMP
Sbjct: 186 RLQFLVRDWSFPYEAEYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMP 245

Query: 786 HPGF-VVSXQNFNGQL 830
           HPG  V +   F+G+L
Sbjct: 246 HPGLNVATNPKFDGRL 261


>AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA,
           isoform A protein.
          Length = 541

 Score =  294 bits (722), Expect = 8e-80
 Identities = 136/256 (53%), Positives = 182/256 (71%), Gaps = 2/256 (0%)
 Frame = +3

Query: 69  VEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAP 248
           V+V+  +++HT+ LNEDAL  +L+RDEVKD           +R GKSFLLDFFLRY+ + 
Sbjct: 6   VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSK 65

Query: 249 PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-NDQKVAVVLMDTQGT 425
               D+  WLG E +PL GF WR G +R TTGI++WS+  +  + N  K+A++L+DTQG 
Sbjct: 66  YVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGA 125

Query: 426 FDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQ 605
           FD+ STVRD +T+FALST+LSS+QIYNL +NI+EDDLQHL LFTEYGRLA  D  +  FQ
Sbjct: 126 FDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQ 185

Query: 606 VLMFLVRDWAYPYQHAFGAEGGEXLLIKRLXITNNXHAELRELXXRIRSCFKSVSCFLMP 785
            L FLVRDW++PY+  +GA GG+ +L +RL +++  H EL+ L   I SCF  V+CFLMP
Sbjct: 186 RLQFLVRDWSFPYEAEYGALGGDKILKRRLEVSDKQHPELQSLRRHISSCFTEVACFLMP 245

Query: 786 HPGF-VVSXQNFNGQL 830
           HPG  V +   F+G+L
Sbjct: 246 HPGLNVATNPKFDGRL 261


>AY075472-1|AAL68284.1|  692|Drosophila melanogaster RE32029p
           protein.
          Length = 692

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -3

Query: 138 VGSSVMHPHSADTCGXXXXXXXXPLWLHRDCS*LRWCFKWLLIG 7
           VGSS+  P S   C         P WL R C+  +W   WL  G
Sbjct: 32  VGSSISGPDSDAECQRFGWCGWNPAWLQRFCT-AKWALFWLCWG 74


>AE014134-1125|AAG22419.2|  692|Drosophila melanogaster CG31634-PA
           protein.
          Length = 692

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -3

Query: 138 VGSSVMHPHSADTCGXXXXXXXXPLWLHRDCS*LRWCFKWLLIG 7
           VGSS+  P S   C         P WL R C+  +W   WL  G
Sbjct: 32  VGSSISGPDSDAECQRFGWCGWNPAWLQRFCT-AKWALFWLCWG 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,387,336
Number of Sequences: 53049
Number of extensions: 675848
Number of successful extensions: 1939
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)