Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_H08
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 276 1e-74
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 276 1e-74
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 276 1e-74
Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical pr... 196 2e-50
AL117202-27|CAB57897.1| 579|Caenorhabditis elegans Hypothetical... 29 5.4
AF031843-1|AAC13679.1| 579|Caenorhabditis elegans GLY9 protein. 29 5.4
Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical pr... 28 7.1
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 276 bits (677), Expect = 1e-74
Identities = 137/270 (50%), Positives = 186/270 (68%), Gaps = 12/270 (4%)
Frame = +3
Query: 57 EAKGVEVVKVTDD--HTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFL 230
E + V VV+V +D H+++LN + L ILL +V D YR GKSFLL+FFL
Sbjct: 29 EPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFL 88
Query: 231 RYL----KAPPS----SRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-N 383
RYL KA D++ W+ + PL+GF WR G +R T GI++WSEP + + N
Sbjct: 89 RYLTWRSKADKVMGEVELDNSQWMSP-NSPLSGFSWRGGSERDTNGILIWSEPFIMKDKN 147
Query: 384 DQKVAVVLMDTQGTFDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEY 563
+++AV+LMDTQG FD+ STV+D +TIFALST++SS+QIYNL +NI+EDDLQHL LFTEY
Sbjct: 148 GEEIAVLLMDTQGAFDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEY 207
Query: 564 GRLACDDDDEAAFQVLMFLVRDWAYPYQHAFGAEGGEXLLIKRLXITNNXHAELRELXXR 743
GRLA +D FQ L+FLVRDW++PY+ FG +GG+ +L +RL ++ HAEL++L
Sbjct: 208 GRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQH 267
Query: 744 IRSCFKSVSCFLMPHPGF-VVSXQNFNGQL 830
IRSCF+ + CFLMPHPG V + NF+G+L
Sbjct: 268 IRSCFEDIRCFLMPHPGLKVATNPNFDGKL 297
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 276 bits (677), Expect = 1e-74
Identities = 137/270 (50%), Positives = 186/270 (68%), Gaps = 12/270 (4%)
Frame = +3
Query: 57 EAKGVEVVKVTDD--HTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFL 230
E + V VV+V +D H+++LN + L ILL +V D YR GKSFLL+FFL
Sbjct: 29 EPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFL 88
Query: 231 RYL----KAPPS----SRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-N 383
RYL KA D++ W+ + PL+GF WR G +R T GI++WSEP + + N
Sbjct: 89 RYLTWRSKADKVMGEVELDNSQWMSP-NSPLSGFSWRGGSERDTNGILIWSEPFIMKDKN 147
Query: 384 DQKVAVVLMDTQGTFDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEY 563
+++AV+LMDTQG FD+ STV+D +TIFALST++SS+QIYNL +NI+EDDLQHL LFTEY
Sbjct: 148 GEEIAVLLMDTQGAFDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEY 207
Query: 564 GRLACDDDDEAAFQVLMFLVRDWAYPYQHAFGAEGGEXLLIKRLXITNNXHAELRELXXR 743
GRLA +D FQ L+FLVRDW++PY+ FG +GG+ +L +RL ++ HAEL++L
Sbjct: 208 GRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQH 267
Query: 744 IRSCFKSVSCFLMPHPGF-VVSXQNFNGQL 830
IRSCF+ + CFLMPHPG V + NF+G+L
Sbjct: 268 IRSCFEDIRCFLMPHPGLKVATNPNFDGKL 297
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 276 bits (677), Expect = 1e-74
Identities = 137/270 (50%), Positives = 186/270 (68%), Gaps = 12/270 (4%)
Frame = +3
Query: 57 EAKGVEVVKVTDD--HTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFL 230
E + V VV+V +D H+++LN + L ILL +V D YR GKSFLL+FFL
Sbjct: 29 EPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFL 88
Query: 231 RYL----KAPPS----SRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-N 383
RYL KA D++ W+ + PL+GF WR G +R T GI++WSEP + + N
Sbjct: 89 RYLTWRSKADKVMGEVELDNSQWMSP-NSPLSGFSWRGGSERDTNGILIWSEPFIMKDKN 147
Query: 384 DQKVAVVLMDTQGTFDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEY 563
+++AV+LMDTQG FD+ STV+D +TIFALST++SS+QIYNL +NI+EDDLQHL LFTEY
Sbjct: 148 GEEIAVLLMDTQGAFDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEY 207
Query: 564 GRLACDDDDEAAFQVLMFLVRDWAYPYQHAFGAEGGEXLLIKRLXITNNXHAELRELXXR 743
GRLA +D FQ L+FLVRDW++PY+ FG +GG+ +L +RL ++ HAEL++L
Sbjct: 208 GRLALEDSASKPFQSLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQH 267
Query: 744 IRSCFKSVSCFLMPHPGF-VVSXQNFNGQL 830
IRSCF+ + CFLMPHPG V + NF+G+L
Sbjct: 268 IRSCFEDIRCFLMPHPGLKVATNPNFDGKL 297
>Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical
protein Y41E3.3 protein.
Length = 520
Score = 196 bits (478), Expect = 2e-50
Identities = 108/255 (42%), Positives = 147/255 (57%), Gaps = 7/255 (2%)
Frame = +3
Query: 87 TDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAPPSSRDS 266
T ++LNE AL +L + +R GKSFLL+FFL YL + S+ S
Sbjct: 38 TQPGKFRLNESALNSVLGHSACANKKIVIISVAGAFRKGKSFLLNFFLEYLYSLHKSQQS 97
Query: 267 AA---WLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPI-VTRFNDQKVAVVLMDTQGTFDN 434
+ WL +D L GF WRAG R T GI LW EPI + + AVVLMDTQGTFDN
Sbjct: 98 DSSLEWL-TDDCQLHGFHWRAGVKRDTVGIWLWGEPIMIESVTGEMFAVVLMDTQGTFDN 156
Query: 435 SSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDE--AAFQV 608
+ST + T+FALST++SS+QIYN+ +NI+ED LQHL LF EYGR+A + FQ
Sbjct: 157 NSTYQQCMTVFALSTIVSSVQIYNVVDNIQEDALQHLSLFVEYGRIAMEQPHNFGKPFQQ 216
Query: 609 LMFLVRDWAYPYQHAFGAEGGEXLLIKRLXITNNXHAELRELXXRIRSCFKSVSCFLMPH 788
L+F VRD+ ++ FG GG L L E++++ +R F+ + C+L+PH
Sbjct: 217 LVFCVRDFKNQEEYEFGENGGTDFLDNVLQTNPEQPEEIKQVRELLREYFEDIQCYLLPH 276
Query: 789 PGF-VVSXQNFNGQL 830
PG+ V Q+F G +
Sbjct: 277 PGYKVAERQSFRGHV 291
>AL117202-27|CAB57897.1| 579|Caenorhabditis elegans Hypothetical
protein Y47D3A.23a protein.
Length = 579
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +3
Query: 354 WSEPIVTRFNDQKVAVVLMDTQGTFDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDD 533
W EPIV R +D++ A+V DN+ ++LST S ++ E + E++
Sbjct: 236 WLEPIVQRISDERTAIVCPMIDSISDNTLAYHGD---WSLSTGGFSWALHFTWEGLSEEE 292
Query: 534 LQHLHLFTEYGR 569
+ T+Y R
Sbjct: 293 QKRRTKPTDYIR 304
>AF031843-1|AAC13679.1| 579|Caenorhabditis elegans GLY9 protein.
Length = 579
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +3
Query: 354 WSEPIVTRFNDQKVAVVLMDTQGTFDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDD 533
W EPIV R +D++ A+V DN+ ++LST S ++ E + E++
Sbjct: 236 WLEPIVQRISDERTAIVCPMIDSISDNTLAYHGD---WSLSTGGFSWALHFTWEGLSEEE 292
Query: 534 LQHLHLFTEYGR 569
+ T+Y R
Sbjct: 293 QKRRTKPTDYIR 304
>Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical
protein ZK1098.8 protein.
Length = 910
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 354 WSEPIVTR-FNDQKVAVVLMDTQGTFDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKED 530
W + +R F D V VV D + D +T+ + + ++ + L EN+ +
Sbjct: 479 WWQKFASRLFGDSPVKVVGFDMRNDLDAMATIPALKSSMKIEDTKNAFDLKRLAENVCDI 538
Query: 531 DLQHLHLFTEYGRLA 575
D++ L L + +LA
Sbjct: 539 DMEILELPKKTFKLA 553
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,038,244
Number of Sequences: 27780
Number of extensions: 321777
Number of successful extensions: 751
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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