Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_H04
(685 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 152 3e-37
08_02_1332 + 26207164-26207257,26207454-26207530,26207771-262078... 50 2e-06
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 48 9e-06
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 43 2e-04
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 36 0.023
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 36 0.023
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 36 0.040
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 35 0.052
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 35 0.069
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 35 0.069
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 34 0.091
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 34 0.091
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 34 0.12
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 34 0.12
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 33 0.16
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 32 0.37
01_06_1061 - 34169469-34169624,34170837-34170938,34171029-341711... 31 0.64
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 31 0.85
05_06_0033 + 25074301-25074393,25074680-25075203,25076367-250764... 31 1.1
08_02_0751 + 20789843-20789908,20791152-20791313,20791516-207915... 30 1.5
03_01_0074 + 610948-611184,611745-611867,611983-612082,612167-61... 30 2.0
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 29 3.4
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 29 4.5
05_07_0108 + 27735783-27736205 29 4.5
05_03_0039 - 7621613-7622695 29 4.5
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 29 4.5
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 28 6.0
05_07_0059 + 27402365-27402733,27402848-27402982,27403070-274031... 28 6.0
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 6.0
05_01_0363 - 2846133-2846441,2846820-2846885,2847184-2847276,284... 28 7.9
>01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,
3986854-3987190,3987602-3987603,3987661-3987743,
3988017-3988116,3988330-3988463,3988711-3988788,
3989333-3989387,3990159-3990239,3990369-3990567,
3990609-3990699,3990770-3990892,3991440-3991528,
3992450-3992539,3992619-3992792,3992911-3993035,
3993246-3993372,3993826-3993998
Length = 816
Score = 152 bits (368), Expect = 3e-37
Identities = 82/177 (46%), Positives = 106/177 (59%), Gaps = 4/177 (2%)
Frame = +3
Query: 165 PTYDEVLLSQLLDMGFPVEACKKSLYYTNNSGIEAASNWLMEHMTDWDFEHKFEPPGTKP 344
P E ++SQL MGF C+K+ T+N+G+E A NWL+ HM D D P +K
Sbjct: 629 PVASEDIVSQLASMGFNYLHCQKAAISTSNTGVEEAMNWLLSHMDDPDIND----PISKD 684
Query: 345 SDAAVGANVDEASVEQIMSMGFTRAQVVRALGATGGDVTRALDWIFSRAD---QLDLDEP 515
S AA VDE SV+ ++S GF +AL A+GG++ RA DWIFS + + D
Sbjct: 685 SQAAE-QTVDETSVQTLVSFGFQEDVARKALAASGGNIERATDWIFSHPEAFSSVPTDSS 743
Query: 516 TPG-PDRTLGCRDGPXKYKLIAFISHMGTSTMVGHYVCHILHEGRWVIFNDNKVALS 683
T D DG +YKL+AF+SHMGTST GHYV H+L +GRWVIFND+KVA S
Sbjct: 744 TSNMEDDDAHIPDGSGRYKLMAFVSHMGTSTHCGHYVAHVLKDGRWVIFNDSKVAAS 800
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 7/33 (21%)
Frame = +2
Query: 83 VDLSSLRGRGLQPDEKQLPE-------ASPXHP 160
+D+S +R +G+QP E+ LPE A P HP
Sbjct: 597 IDISHMRSKGIQPGEELLPEGASGDNKAEPVHP 629
>08_02_1332 +
26207164-26207257,26207454-26207530,26207771-26207841,
26208448-26208502,26209066-26209187,26209272-26209353,
26210070-26210160,26210759-26210982,26211294-26211413,
26211523-26211705
Length = 372
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +3
Query: 165 PTYDEVLLSQLLDMGFPVEACKKSLYYTNNSGIEAASNWLMEHMTDWDFE 314
P D+ +LS+L MGFP ++L+++ NS +E+A NWL+EH D D +
Sbjct: 4 PQLDKRILSELELMGFPTARSIRALHFSGNSSLESAINWLLEHENDPDID 53
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 369 VDEASVEQIMSMGFTRAQVVRALGATG-GDVTRALDWIFSRADQLDLDE-PTPGPDRTLG 542
+D+ + ++ MGF A+ +RAL +G + A++W+ + D+D+ P + +
Sbjct: 6 LDKRILSELELMGFPTARSIRALHFSGNSSLESAINWLLEHENDPDIDQLPLIPREINIE 65
Query: 543 CRDGP 557
C D P
Sbjct: 66 CGDTP 70
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = +3
Query: 147 PLXTPAPTYDEVLLSQLLDMGFPVEACKKSLYYTNNSGIEAASNWLMEHMTDWDFEHKFE 326
P AP ++ +L+ L MGF ++L+++ NS IE A NWL EH D D +
Sbjct: 105 PQEMVAPEVNKEMLADLEAMGFTTARATRALHFSGNSTIEGAINWLSEHQEDPDIDE--- 161
Query: 327 PPGTKPSDAAVGANVDEASVEQI 395
P P++ AN S E++
Sbjct: 162 -PLLVPANTITEANKPSLSPEEM 183
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 357 VGANVDEASVEQIMSMGFTRAQVVRALGATGGD-VTRALDWIFSRADQLDLDEPTPGPDR 533
V V++ + + +MGFT A+ RAL +G + A++W+ + D+DEP P
Sbjct: 109 VAPEVNKEMLADLEAMGFTTARATRALHFSGNSTIEGAINWLSEHQEDPDIDEPLLVPAN 168
Query: 534 TL 539
T+
Sbjct: 169 TI 170
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 549 DGPXKYKLIAFISHMGTSTMVGHYVCHILHEGRWVIFNDNKVALS 683
D +Y L A + H+G+S GHYV I G W+ F+D+ V +S
Sbjct: 336 DADCEYSLFAVVVHVGSSPNHGHYVSQIKSHGNWLSFDDDTVQIS 380
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 369 VDEASVEQIMSMGFTRAQVVRAL-GATGGDVTRALDWIFSRADQ 497
+DE+S+ I+ MGF+RA+ AL V A DW+FS ++
Sbjct: 1205 LDESSIATIVEMGFSRARAEEALRSVRTNSVEMATDWLFSHPEE 1248
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 162 APTYDEVLLSQLLDMGFPVEACKKSLYYTNNSGIEAASNWLMEH 293
+P DE ++ +++MGF +++L + +E A++WL H
Sbjct: 1202 SPPLDESSIATIVEMGFSRARAEEALRSVRTNSVEMATDWLFSH 1245
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +3
Query: 549 DGPXKYKLIAFISHMG--TSTMVGHYVCHIL-HEGRWVIFNDNKV 674
DG +Y L A + H+ ++ GHY+C+I + GRW +D KV
Sbjct: 446 DGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKV 490
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 549 DGPXKYKLIAFISHMGTSTMVGHYVCHILHEGRWVIFNDNKVAL 680
D +Y L A + H+G+ GHYV + W+ F+D V +
Sbjct: 287 DVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEM 330
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVCHILH-EGRWVIFNDNKVAL 680
Y LIA ++H G S GHYV + +G+W+ F+D+ ++
Sbjct: 378 YDLIAVLTHKGRSADSGHYVGWVKQDDGKWIEFDDDNPSI 417
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 34.7 bits (76), Expect = 0.069
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVCHILHE--GRWVIFNDNKVA 677
Y L A + H G++ GHYV H+ E G+W F+D V+
Sbjct: 363 YGLSAILIHKGSAANSGHYVAHVKDESNGQWWEFDDEHVS 402
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 34.7 bits (76), Expect = 0.069
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 561 KYKLIAFISHMGTSTMVGHYVCHILHEGRWVIFNDNKVALS 683
+Y L A + H+G+ GHY+ + W+ F+D V ++
Sbjct: 292 EYSLFAVLVHVGSGPNHGHYISLVKSHNHWLFFDDENVEMT 332
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 34.3 bits (75), Expect = 0.091
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 561 KYKLIAFISHMGTSTMVGHYVCHILH-EGRWVIFNDNKV 674
+Y+L+A I+H+G + GHY G+W+ F+D+ V
Sbjct: 621 RYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNV 659
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 561 KYKLIAFISHMGTSTMVGHYVCHI-LHEGRWVIFNDNKV 674
KY L + H G +T GHY C + G W +DN+V
Sbjct: 275 KYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQV 313
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 33.9 bits (74), Expect = 0.12
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 561 KYKLIAFISHMGTSTMVGHYVCHI 632
+Y+L+ F+ H+G S GHYV ++
Sbjct: 682 RYRLVGFVEHLGPSMYAGHYVAYV 705
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = +3
Query: 345 SDAAVGANVDEASVEQIMSMG---FTRAQVVRALGATGGDVTRALDWIFSRADQLDLDEP 515
S+ G+N+++ +++QI+ MG + R VVRAL A + RA+D+++S + +++ P
Sbjct: 157 SNLVSGSNLEQ-TIQQILDMGGGTWERDMVVRALRAAYNNPERAIDYLYSGIPE-NVEPP 214
Query: 516 TP 521
P
Sbjct: 215 QP 216
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 561 KYKLIAFISHMGTSTMVGHYVCHI-LHEGRWVIFNDNK 671
KY L + H G +T GHY C + G W +DNK
Sbjct: 362 KYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNK 399
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVCHILHEGR--WVIFNDNKV 674
Y+L A +H G S GHY ++ HEG+ W F+D V
Sbjct: 814 YRLYAISNHYG-SMGGGHYTAYVYHEGKKGWYDFDDRHV 851
>01_06_1061 -
34169469-34169624,34170837-34170938,34171029-34171180,
34172087-34172153,34172239-34172419,34172655-34172778,
34174775-34174871,34175929-34176331,34176729-34176888,
34177412-34177486,34177714-34177892,34178224-34178303,
34178561-34179322
Length = 845
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 375 EASVEQIMSMGFTRAQVVRALGATGGDVTRA 467
E+S+ ++SMGF R +RAL T DV A
Sbjct: 805 ESSIATLVSMGFDRGSAIRALALTNYDVNLA 835
>04_01_0399 -
5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 342 PSDAAVGANVDEASVEQIMSMGFTRAQVVRALGATGGDVTRALDWIFSRADQLDLDEPTP 521
PS + A+ + A+V ++ G A+VV A+ GG+ RA++ + A D+P P
Sbjct: 9 PSQEVLYAD-EIAAVRAVLGAGLPEARVVAAISRCGGNAERAINALLDDATAGVEDKPEP 67
>05_06_0033 +
25074301-25074393,25074680-25075203,25076367-25076442,
25076549-25076641,25077167-25077253,25077338-25078095,
25078447-25078575,25079145-25079265
Length = 626
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 546 RDGPXKYKLIAFISHMGTSTMVGHYVCHILHE-GRWVIFNDNKVALS 683
+D Y L I H G S GHY ++ GRW ND+ ++ S
Sbjct: 262 QDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHISPS 308
>08_02_0751 +
20789843-20789908,20791152-20791313,20791516-20791566,
20792096-20792160,20792385-20792459,20792603-20792780,
20793171-20793353,20793436-20793549,20793627-20793736,
20793826-20793904,20794035-20794172
Length = 406
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 342 PSDAAVGANVDEASVEQIMSMGFTRAQVVRALGATGGDVTRALDWIFSRADQLDLDEPTP 521
P AV +EA ++++ MGF R V+ A D A +++ ++ D D P P
Sbjct: 346 PQTVAVTPEENEA-IQRLEQMGFDRDLVLEVFFACNKDELLAANYLLDHMNEFDDDAPEP 404
>03_01_0074 +
610948-611184,611745-611867,611983-612082,612167-612213,
612292-612450,613033-613132,613209-613300,613390-614532,
614949-615041,615408-615493,615746-615873,615965-616086,
616202-616270,616380-616518,616624-616686,616887-616930,
617339-617425
Length = 943
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 330 PGTK-PSDAAVGANVDEASVEQIMSMGFTRAQVVRALGATGGDVTRAL 470
P T+ P DA AN A V + M MGF + +++A+ G T L
Sbjct: 114 PSTRLPQDANGKANGSGALVAEFMGMGFPKEMILKAIKEIGDTDTEQL 161
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVCHI 632
Y+L+ + H+G S GHYV ++
Sbjct: 750 YRLVGVVEHLGHSMYSGHYVAYV 772
>09_04_0070 +
14308446-14308511,14308844-14309005,14309420-14309473,
14310009-14310073,14310391-14310459,14310590-14310767,
14311085-14311231,14311316-14311432,14311507-14311619,
14311703-14311781,14311892-14312020
Length = 392
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 165 PTYDEVLLSQLLDMGFPVEACKKSLYYTNNSGIEAASNWLMEHMTDWDFE 314
P +E +L +L MGF A +++ N + A+N+L++HM ++D E
Sbjct: 342 PEENEAIL-RLEAMGFD-RALVLDVFFACNKDEQLAANYLLDHMNEFDDE 389
>05_07_0108 + 27735783-27736205
Length = 140
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Frame = +3
Query: 6 NLKSLLIKEDWTPDKT*RGRGHALWRWI*AASVDEGCS------LMRSNCPRHPL 152
N+ S + +E PD GRG RW AAS++EG S S+ P HPL
Sbjct: 84 NVVSRIRRERRPPDDDAGGRGRQRRRWGKAASLEEGFSPFFPILAPPSSSPLHPL 138
>05_03_0039 - 7621613-7622695
Length = 360
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 450 RPWPQARGPPEPE*IPYSLSAPRLLHQRWHPRPHPK 343
+P P+ P PE P P+L H + P+PHP+
Sbjct: 195 KPEPKPEPKPHPEPKPEPKPEPKL-HPKPEPKPHPE 229
>03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 549 DGPXKYKLIAFISHMGTSTMVGHYVCHILHEGRWVIFNDNKV 674
D K+ L++ + + G HY C +G+WV+++D V
Sbjct: 1514 DQGSKHSLVSVVCYYGQ-----HYHCFAFEDGQWVMYDDQTV 1550
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 312 EHKFEPPGTKPSDAAVGANVD 374
EH EP GT PSD VG D
Sbjct: 27 EHGIEPDGTMPSDTTVGVAHD 47
>05_07_0059 +
27402365-27402733,27402848-27402982,27403070-27403183,
27403297-27403449,27403544-27403644,27403945-27404041,
27404542-27404651,27404775-27404878,27405129-27405308,
27405398-27405741,27405841-27405905,27405981-27406450,
27406939-27407793,27408045-27408116,27408475-27408575,
27409069-27409170,27409295-27409456,27409665-27411230,
27411384-27411602,27413924-27414198,27414291-27414596,
27414727-27415012,27415085-27415087,27415162-27415416,
27415537-27415803
Length = 2236
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 143 PRAVASHQAATLVHGGCLDPPPQGMSTATSSFV 45
PRA AS QA G PPP+ MS S +
Sbjct: 63 PRASASRQAEAGAGAGAARPPPRSMSKIPESSI 95
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 148 PXTPQLLHTMKYYCHNCSTWGSRWKRARNLCTTPTTLVSKP 270
P P ++H ++C NC R R P T+V+ P
Sbjct: 169 PCDPCMVHCCLHWCANCQEHRERTGRLAENSAVPMTVVNPP 209
>05_01_0363 -
2846133-2846441,2846820-2846885,2847184-2847276,
2847487-2847600,2847762-2847849,2848116-2848199,
2848312-2848411,2848886-2848949,2849339-2849419,
2849944-2850000,2850188-2850387,2850668-2850971,
2851518-2851707,2851922-2852032,2852111-2852192,
2852443-2853046
Length = 848
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 348 DAAVGANVD-EASVEQIMSMGFTRAQVVRALGATGGDVTRALDWI 479
D A G +V + + +++ MGF ++ RA+GA G L+++
Sbjct: 3 DGAAGGDVSADRVIAELLDMGFEFDEISRAIGAVGTRCADVLEFM 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,606,224
Number of Sequences: 37544
Number of extensions: 590951
Number of successful extensions: 1885
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1879
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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