Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_H04
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 126 1e-29
AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical ... 39 0.003
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 36 0.027
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 34 0.082
Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical p... 34 0.11
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 34 0.11
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 34 0.11
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 34 0.11
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 33 0.19
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 33 0.19
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 32 0.44
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 31 0.77
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 31 0.77
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 31 0.77
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 31 1.0
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 29 2.3
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 29 3.1
U80836-3|ABA54428.1| 100|Caenorhabditis elegans Hypothetical pr... 29 4.1
U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical pr... 27 9.4
U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical ... 27 9.4
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical protein
T27A3.2 protein.
Length = 789
Score = 126 bits (305), Expect = 1e-29
Identities = 79/195 (40%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Frame = +3
Query: 138 PRHPLXTP-APTYDEVLLSQLLDMGFPVEACKKSLYYTNNSGIEAASNWLMEHMTDWDFE 314
P P TP P + +L+ MGF AC ++ YY+N + +E ASNWLMEHM D D
Sbjct: 583 PTAPRTTPDIPASVRFVAGELMLMGFCENACYRAAYYSNGN-VEIASNWLMEHMDDSDIN 641
Query: 315 HKFEPPGTKPSDAAVGANVDEASVEQIMSMGFTRAQVVRALGATGGDVTRALDWIFSRAD 494
F P PS VD V I+ MGF+ Q AL V A++W+F+ D
Sbjct: 642 DLFVIPSGTPS---ARGEVDPNLVASIVEMGFSNHQAKYALKQVP-TVAEAVEWLFANMD 697
Query: 495 QLD-------LDEPTPGPDRTLGC-----RDGPXKYKLIAFISHMGTSTMVGHYVCHILH 638
+ L P P T +DG KYKLI ISHMG+ GHYV H+L
Sbjct: 698 SIPVESAAVGLSSDAPEPSVTESATQKTFKDGGEKYKLIGMISHMGSRPDSGHYVAHMLK 757
Query: 639 EGRWVIFNDNKVALS 683
EG+WV+FND KVALS
Sbjct: 758 EGKWVLFNDEKVALS 772
>AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical
protein C24G6.8 protein.
Length = 316
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 144 HPLXTPAPT-YDEVLLSQLLDMGFPVEACKKSLYYTNNSGIEAASNWLMEHMTDWDFE 314
HP+ P + L+ LLD+GF +L TN++G+E A W++E + DF+
Sbjct: 119 HPVDPQEPNEVNNEYLAHLLDLGFDEYTAVLALKRTNSAGVEQAVAWIVERSNESDFD 176
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 342 PSDAAVGANVDEASVEQIMSMGFTRAQVVRALGATGG-DVTRALDWIFSRADQLDLDE 512
P D V+ + ++ +GF V AL T V +A+ WI R+++ D DE
Sbjct: 120 PVDPQEPNEVNNEYLAHLLDLGFDEYTAVLALKRTNSAGVEQAVAWIVERSNESDFDE 177
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 555 PXKYKLIAFISHMGTSTMVGHYVCHILHE--GRWVIFND 665
P Y L+ F+ H G S GHYV + HE +W F+D
Sbjct: 486 PALYDLVGFVVHEGRSLEFGHYVSYCRHEQDNQWYKFDD 524
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 34.3 bits (75), Expect = 0.082
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 549 DGPXKYKLIAFISHMGTSTMVGHYVCHILHEGRWVIFNDNKV 674
+ P Y L + I H+G GHY+ GRW F+D V
Sbjct: 632 EAPCTYSLQSIIVHIGYGCGSGHYIAFGKRNGRWFQFDDTVV 673
>Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical
protein R10E11.3b protein.
Length = 414
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 552 GPXKYKLIAFISHMGTSTMVGHYVCHILHEGRWVIFNDNKV 674
G Y L+A + H G + GHY+ + W++F+D+ V
Sbjct: 309 GDRMYDLVATVVHCGATPNRGHYITLVKSNSFWLVFDDDIV 349
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 552 GPXKYKLIAFISHMGTSTMVGHYVCHILHEGRWVIFNDNKV 674
G Y L+A + H G + GHY+ + W++F+D+ V
Sbjct: 321 GDRMYDLVATVVHCGATPNRGHYITLVKSNSFWLVFDDDIV 361
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVCHIL--HEGRWVIFNDNKVA 677
YKL I H+G+S GH+ +L RW F+D++V+
Sbjct: 279 YKLTGLIVHVGSSAKEGHFYSFVLQNESSRWSKFDDDRVS 318
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVCHIL--HEGRWVIFNDNKVA 677
YKL I H+G+S GH+ +L RW F+D++V+
Sbjct: 326 YKLTGLIVHVGSSAKEGHFYSFVLQNESSRWSKFDDDRVS 365
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVCHI--LHEGRWVIFNDNKVAL 680
Y L I+H G S+ GHYV + +G+W +F+D V +
Sbjct: 392 YDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVTV 432
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVCHI--LHEGRWVIFNDNKVAL 680
Y L I+H G S+ GHYV + +G+W +F+D V +
Sbjct: 392 YDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVTV 432
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 552 GPXKYKLIAFISHMGTSTMVGHYVCHI--LHEGRWVIFNDNKV 674
G Y+L + + H G + GHY +I L + RW +FND +V
Sbjct: 400 GDNVYELFSVMVHSGNAAG-GHYFAYIKNLDQDRWYVFNDTRV 441
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVCHI--LHEGRWVIFNDNKVAL 680
Y L ++H G S+ GHYV + +G+W +F+D V +
Sbjct: 392 YDLKGIMTHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVTV 432
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 555 PXKYKLIAFISHMGTSTMVGHYVCH---ILHEGRWVIFNDNKV 674
P Y L+A + H+G S GHYV + + W+ +D+ +
Sbjct: 756 PGTYSLVAVVCHLGDSPNKGHYVAYTKELYKNSSWLRCSDDNI 798
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 561 KYKLIAFISHMGTSTMVGHYVCHILH--EGRWVIFNDNKV 674
KY L+A I H+G + GHY+ + E W+ +D+ +
Sbjct: 452 KYSLVAAICHLGETPTNGHYIAYTREDTENSWLYCSDDLI 491
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 555 PXKYKLIAFISHMGTSTMVGHYVCH---ILHEGRWVIFNDNKV 674
P Y L+A + H+G S GHYV + + W+ +D+ +
Sbjct: 756 PGTYSLVAVVCHLGDSPNKGHYVAYTKELYKNSSWLRCSDDNI 798
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 555 PXKYKLIAFISHMGTSTMVGHYVCHI---LHEGRWVIFNDNKV 674
P +Y L++ + H+G+S GH+V + L W+ +D+K+
Sbjct: 485 PRRYTLVSVVCHLGSSPNKGHHVAYTKKSLDNDGWLRCSDDKL 527
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -3
Query: 452 TARGPKRADHLSPSESHTHYLLHACFINVGTHGRIRRLSPRRFKLMFKVPIGHVFHEPV 276
T P DH+ S +T F++V T + +PR+F +P G V +P+
Sbjct: 408 TTTTPSIVDHVFSSLMNTQQQKLVEFVHVPTDQKTTGETPRKFSSHETIPFGQVEQQPI 466
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
protein F31E3.4 protein.
Length = 1131
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 142 GIPXTPQLLHTMKYYCHNCSTWGSRWKRARNLCTTPTTLVSKPRPTGSWNT*PIGTLNIS 321
G+P PQ M YC +C T T+ ++P T +W+ P G
Sbjct: 236 GMPYLPQFARFMPSYCER-------------VCVTYQTMYNQPGQTATWSNHPAGVKMFD 282
Query: 322 LNRLGLS 342
LN G S
Sbjct: 283 LNSNGNS 289
>U80836-3|ABA54428.1| 100|Caenorhabditis elegans Hypothetical
protein B0432.14 protein.
Length = 100
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 624 CHILHEGRWVIFNDNK 671
CH+ H G W+ FND K
Sbjct: 18 CHVAHAGTWLSFNDFK 33
>U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical
protein T22F3.2b protein.
Length = 368
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVC---HILHEGRWVIFNDNKVA 677
YKL + H GT+ GHY C E ++V ND+ V+
Sbjct: 296 YKLCGAVIHGGTTLDYGHYWCVARSRKREEQFVTLNDSSVS 336
>U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical
protein T22F3.2a protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 564 YKLIAFISHMGTSTMVGHYVC---HILHEGRWVIFNDNKVA 677
YKL + H GT+ GHY C E ++V ND+ V+
Sbjct: 304 YKLCGAVIHGGTTLDYGHYWCVARSRKREEQFVTLNDSSVS 344
>AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical
protein F23C8.4 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 183 LLSQLLDMGFPVEACKKSLYYTNNSGIEAASNWL 284
+ QL+DMGFP + K NN ++ A +W+
Sbjct: 3 IAQQLMDMGFPAD--KAEAAAGNNRNLDQALDWI 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,430,216
Number of Sequences: 27780
Number of extensions: 437029
Number of successful extensions: 1182
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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