Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_H03
         (816 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132848-1|CAB60388.2|  381|Caenorhabditis elegans Hypothetical ...    32   0.43 

>AL132848-1|CAB60388.2|  381|Caenorhabditis elegans Hypothetical
           protein Y47H10A.2 protein.
          Length = 381

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 22/87 (25%), Positives = 41/87 (47%)
 Frame = +2

Query: 404 FLLSETPKYCFAIAIDKLYEYNDVEDKGHISPQCEQRPMSLKYMSWTLVDSVLSDKEVMV 583
           F L   P   FA  ++ + + N+  +    S +CE +   +K   + ++   L D E + 
Sbjct: 24  FKLLNLPYLAFAKVLNGM-KVNEAVNLSQTSIKCEIKMKRVKKRIYKIIIENLDDCEEID 82

Query: 584 RVHGQYKHSWRAGVVDVKLDLIPFYDY 664
             + + KH  R  +V+ K D+I  Y+Y
Sbjct: 83  EENTEIKHLQRIILVNKKCDVIDAYNY 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,420,700
Number of Sequences: 27780
Number of extensions: 411662
Number of successful extensions: 1074
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)