Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_G23
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 315 NPICEICTKPLNEGECI 365
           NP+  IC KP  +  C+
Sbjct: 454 NPLDAICNKPRKDAVCV 470


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 331 FVQNH*MKENAYDLLV 378
           F+QN  +KEN YD ++
Sbjct: 167 FLQNLILKENTYDAVI 182


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 266 WMICNHTIFANIHSMFETKLICHSSLG 186
           + +CN TIF   HS+   K    +SLG
Sbjct: 154 YYVCNTTIFLIFHSVLPIKRF-FTSLG 179


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 223 CSKQN*FVTRLLGHLHKPIXVLFF 152
           C+  N FV  L+G LH  I ++FF
Sbjct: 161 CTSMN-FVL-LIGDLHTSIYIIFF 182


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin
          deacetylase 2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 5  RPMDNFTWLTGTGDCTAV 58
          RP D +  LT  GDC  V
Sbjct: 37 RPADEYFRLTTEGDCRDV 54


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin
          deacetylase 2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 5  RPMDNFTWLTGTGDCTAV 58
          RP D +  LT  GDC  V
Sbjct: 37 RPADEYFRLTTEGDCRDV 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,781
Number of Sequences: 336
Number of extensions: 3812
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)