Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_G23
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 200 1e-51
AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical ... 80 1e-15
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 34 0.11
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 33 0.20
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 31 0.60
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 31 0.60
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 31 0.60
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 29 2.4
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 29 2.4
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 29 2.4
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 29 3.2
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 29 3.2
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 29 3.2
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 29 3.2
AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical ... 27 9.8
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 200 bits (487), Expect = 1e-51
Identities = 83/139 (59%), Positives = 98/139 (70%)
Frame = +3
Query: 168 MGLCKCPKRRVTNQFCFEHRVNVCENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTKPL 347
MGLCKCPKR+VTN FC+EHRVNVCE C+V NHP C++QSYL WL D DY+P C +C L
Sbjct: 1 MGLCKCPKRKVTNLFCYEHRVNVCEFCLVDNHPNCVVQSYLTWLTDQDYDPNCSLCKTTL 60
Query: 348 NEGECIRLTCYHVXHWSCAESKYRALPRTTAPAGYXCPSCATXXFPPPNLVSPVADVLKE 527
EG+ IRL C H+ HW C + P TTAPAGY CP C+ FPP N VSP+ + L+E
Sbjct: 61 AEGDTIRLNCLHLLHWKCFDEWAANFPATTAPAGYRCPCCSQEVFPPINEVSPLIEKLRE 120
Query: 528 KLAGVNWARAGLGLPLLSE 584
+L NWARA LGLP L E
Sbjct: 121 QLKQSNWARAALGLPTLPE 139
>AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical
protein Y45G12B.2b protein.
Length = 246
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/65 (53%), Positives = 41/65 (63%)
Frame = +3
Query: 390 HWSCAESKYRALPRTTAPAGYXCPSCATXXFPPPNLVSPVADVLKEKLAGVNWARAGLGL 569
HW C + P TTAPAGY CP C+ FPP N VSP+ + L+E+L NWARA LGL
Sbjct: 12 HWKCFDEWAANFPATTAPAGYRCPCCSQEVFPPINEVSPLIEKLREQLKQSNWARAALGL 71
Query: 570 PLLSE 584
P L E
Sbjct: 72 PTLPE 76
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 324 CEICTKPLNEGECIRLTCYHVXHWSC-AESKYRALPRTTAPAGYXCPSCA 470
C C KP + + + +C H W C A + + + ++ A + CPSCA
Sbjct: 18 CVKCKKPRGDLQYLGSSCKHAYCWECIATFQQKPSGKRSSVARHMCPSCA 67
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 309 DYNPICEIC-TKPLNEGECIRLTCYHVXHWSC 401
D + +C IC T+ L CIRL C H+ H+ C
Sbjct: 3512 DGDDVCVICFTERLGAAPCIRLGCGHMFHFHC 3543
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 31.5 bits (68), Expect = 0.60
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Frame = +3
Query: 183 CPKRRVTNQFCFEHRVNVC-ENCMVTNHPKCIIQSYLQWLQDSDYNP-ICEICTKPLNEG 356
CP VT QF E R N C E+C + C + + L W ++ +P +C+ C +
Sbjct: 305 CPSDPVTGQFKCECRHNTCGESC----NRCCPLFNQLPWKPGTNSHPNVCQQCQCFNHAH 360
Query: 357 ECIRLTCYHVXHWSCA-ESKY----RALPRTTAPAGYXCPSCATXXFPPPNL 497
C+ WS E Y R L G+ C C + P L
Sbjct: 361 SCVYDDELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGL 412
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 31.5 bits (68), Expect = 0.60
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Frame = +3
Query: 183 CPKRRVTNQFCFEHRVNVC-ENCMVTNHPKCIIQSYLQWLQDSDYNP-ICEICTKPLNEG 356
CP VT QF E R N C E+C + C + + L W ++ +P +C+ C +
Sbjct: 305 CPSDPVTGQFKCECRHNTCGESC----NRCCPLFNQLPWKPGTNSHPNVCQQCQCFNHAH 360
Query: 357 ECIRLTCYHVXHWSCA-ESKY----RALPRTTAPAGYXCPSCATXXFPPPNL 497
C+ WS E Y R L G+ C C + P L
Sbjct: 361 SCVYDDELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGL 412
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 31.5 bits (68), Expect = 0.60
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Frame = +3
Query: 183 CPKRRVTNQFCFEHRVNVC-ENCMVTNHPKCIIQSYLQWLQDSDYNP-ICEICTKPLNEG 356
CP VT QF E R N C E+C + C + + L W ++ +P +C+ C +
Sbjct: 305 CPSDPVTGQFKCECRHNTCGESC----NRCCPLFNQLPWKPGTNSHPNVCQQCQCFNHAH 360
Query: 357 ECIRLTCYHVXHWSCA-ESKY----RALPRTTAPAGYXCPSCATXXFPPPNL 497
C+ WS E Y R L G+ C C + P L
Sbjct: 361 SCVYDDELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGL 412
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 237 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 341
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 196 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 228
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 237 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 341
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 2049 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 2081
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 237 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 341
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 475 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 507
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 237 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 341
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 293 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 325
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 237 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTK 341
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 188 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 220
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 324 CEICTKPLNEGECIRLTCYHVXHWSCAESKYRALPRTTAPAGYXCPSCATXXFP--PPNL 497
C IC + N L C H+ W+C + A + + + CP C P P NL
Sbjct: 255 CSICLENKNPSA---LFCGHLFCWTCIQEHAVAATSSASTSSARCPQCRLEFQPRDPNNL 311
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 147 IPKNKTXMGLCKCPKRRVTNQFCFEHRVNVCEN-CMVTNH-PKCIIQ 281
IP N T G+ +CP ++ C E C++ CM T H +CI Q
Sbjct: 279 IPMNATCNGIKECPLGDDESKHCSECARKRCDHTCMNTPHGARCICQ 325
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 147 IPKNKTXMGLCKCPKRRVTNQFCFEHRVNVCEN-CMVTNH-PKCIIQ 281
IP N T G+ +CP ++ C E C++ CM T H +CI Q
Sbjct: 279 IPMNATCNGIKECPLGDDESKHCSECARKRCDHTCMNTPHGARCICQ 325
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 147 IPKNKTXMGLCKCPKRRVTNQFCFEHRVNVCEN-CMVTNH-PKCIIQ 281
IP N T G+ +CP ++ C E C++ CM T H +CI Q
Sbjct: 279 IPMNATCNGIKECPLGDDESKHCSECARKRCDHTCMNTPHGARCICQ 325
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 147 IPKNKTXMGLCKCPKRRVTNQFCFEHRVNVCEN-CMVTNH-PKCIIQ 281
IP N T G+ +CP ++ C E C++ CM T H +CI Q
Sbjct: 279 IPMNATCNGIKECPLGDDESKHCSECARKRCDHTCMNTPHGARCICQ 325
>AC006624-2|AAF39784.2| 254|Caenorhabditis elegans Hypothetical
protein C53D5.2 protein.
Length = 254
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/52 (21%), Positives = 21/52 (40%)
Frame = +3
Query: 237 CENCMVTNHPKCIIQSYLQWLQDSDYNPICEICTKPLNEGECIRLTCYHVXH 392
C ++ H C+++ + +P CE+C G ++ HV H
Sbjct: 37 CSGTLLFVHKACVVRWLEMSTRKMVPSPRCELCGYDYRRGNIFQMKSLHVPH 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,243,969
Number of Sequences: 27780
Number of extensions: 345094
Number of successful extensions: 779
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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