BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_G20
(485 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 26 0.60
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 23 5.6
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 23 7.3
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 22 9.7
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 22 9.7
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 22 9.7
AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450 CY... 22 9.7
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 26.2 bits (55), Expect = 0.60
Identities = 8/23 (34%), Positives = 10/23 (43%)
Frame = -2
Query: 400 CTLNLFATNLHNYHLWPGWWITF 332
C N + NY W WW+ F
Sbjct: 265 CKWNNWTKQRRNYGTWISWWVEF 287
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 23.0 bits (47), Expect = 5.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 212 FIWFGVPMTGF 244
F+W GVP+ GF
Sbjct: 606 FLWNGVPLAGF 616
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 22.6 bits (46), Expect = 7.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 344 VDHLL*LCLQTKQTYHGSSSSSRFLGHPEICL*RTLSSEHQTK 216
+DH+ L + + YH SSSS+ HP + +++TK
Sbjct: 444 IDHVCELLPRLQPRYHSISSSSKL--HPTTVHVTAVLVKYETK 484
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 22.2 bits (45), Expect = 9.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 96 HRLSHHKHYAYFS*LEPHSQVESSTDQSIKWPSSASLLASFG 221
H+L HH H+ + +P Q +S SI + + L FG
Sbjct: 101 HQLPHHPHHQHHPQQQPSPQ--TSPPASISFSITNILSDRFG 140
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 22.2 bits (45), Expect = 9.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 96 HRLSHHKHYAYFS*LEPHSQVESSTDQSIKWPSSASLLASFG 221
H+L HH H+ + +P Q +S SI + + L FG
Sbjct: 101 HQLPHHPHHQHHPQQQPSPQ--TSPPASISFSITNILSDRFG 140
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 22.2 bits (45), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 96 HRLSHHKHYAYFS*LEPHSQVESST 170
H SHH+HY + HS E+ST
Sbjct: 226 HMRSHHQHYT-ANHQNGHSAPEAST 249
>AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450
CYP9K1 protein.
Length = 531
Score = 22.2 bits (45), Expect = 9.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 96 HRLSHHKHYAYFS*LEP 146
HR + H+ + YF L P
Sbjct: 72 HRFASHRFFGYFDFLSP 88
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,015
Number of Sequences: 2352
Number of extensions: 8044
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -