Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_G13
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97193-6|AAV34803.1| 780|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U97193-5|AAV34804.1| 783|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 29 4.3
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 29 4.3
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 29 4.3
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 29 4.3
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 29 4.3
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 28 7.4
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 28 7.4
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 28 7.4
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 28 7.4
>U97193-6|AAV34803.1| 780|Caenorhabditis elegans Hypothetical
protein C06A5.3a protein.
Length = 780
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Frame = +1
Query: 238 YKSGDFIFAKVKGYPAWPARV----QRLNGKKYFVYFYGTGEIANLPPNMIFDYAENKDK 405
++ GD I+AK+KG+P WPA+V + ++ V F+GT E + + PN + DY N+
Sbjct: 13 FQPGDLIWAKMKGFPPWPAKVLERSEDAPARRIPVMFFGTLETSFMKPNDLSDYLPNR-L 71
Query: 406 FLTKTVKRRDFNDGVKQI 459
K++DFN V++I
Sbjct: 72 IHEIPRKQKDFNKAVQEI 89
>U97193-5|AAV34804.1| 783|Caenorhabditis elegans Hypothetical
protein C06A5.3b protein.
Length = 783
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Frame = +1
Query: 238 YKSGDFIFAKVKGYPAWPARV----QRLNGKKYFVYFYGTGEIANLPPNMIFDYAENKDK 405
++ GD I+AK+KG+P WPA+V + ++ V F+GT E + + PN + DY N+
Sbjct: 13 FQPGDLIWAKMKGFPPWPAKVLERSEDAPARRIPVMFFGTLETSFMKPNDLSDYLPNR-L 71
Query: 406 FLTKTVKRRDFNDGVKQI 459
K++DFN V++I
Sbjct: 72 IHEIPRKQKDFNKAVQEI 89
>Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical
protein C54G4.8 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 250 DFIFAKVKGYPAWPARVQRLNGKKYFVYFYGTGEIANLPPNMIFDYAENKD 402
D++F+ + GY PA V+ +GK Y YF G I ++P + + E KD
Sbjct: 161 DYVFSLLTGYLEAPAGVKVDDGKAYNPYF--PGGIISMPQQLFDEGIEYKD 209
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 382 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 474
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 382 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 474
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 382 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 474
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 382 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 474
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 382 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 474
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 382 DYAENKDKFLTKTVKRRDFNDGVKQIEHDFA 474
++A++K K TK K+ DG K IE DFA
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFA 151
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 301 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 438
+++ K+Y + F+ E NLP + +FD E+KD K R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 301 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 438
+++ K+Y + F+ E NLP + +FD E+KD K R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 301 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 438
+++ K+Y + F+ E NLP + +FD E+KD K R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 301 QRLNGKKYFVY-FYGTGEIANLPPNMIFDYAENKDKFLTKTVKRRDF 438
+++ K+Y + F+ E NLP + +FD E+KD K R +F
Sbjct: 280 EKIKAKRYLLESFFPEFEGYNLPNDAVFDNQEDKDVVRAKYFIRGEF 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,959,612
Number of Sequences: 27780
Number of extensions: 238000
Number of successful extensions: 674
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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