Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_G08
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 252  KEHVKVEGKTNNLSNHVVVARDKTKVAITADIP 350
            K H++  G  N   N+ VVAR+  + ++ + IP
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH-RNSVASSIP 1515


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 252  KEHVKVEGKTNNLSNHVVVARDKTKVAITADIP 350
            K H++  G  N   N+ VVAR+  + ++ + IP
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH-RNSVASSIP 1515


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 252  KEHVKVEGKTNNLSNHVVVARDKTKVAITADIP 350
            K H++  G  N   N+ VVAR+  + ++ + IP
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH-RNSVASSIP 1515


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 252  KEHVKVEGKTNNLSNHVVVARDKTKVAITADIP 350
            K H++  G  N   N+ VVAR+  + ++ + IP
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH-RNSVASSIP 1515


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 8   PMHFAVFTVTALHVFVCHNGS 70
           P+    F  TAL +F C  GS
Sbjct: 61  PVKCLAFFCTALVIFYCQEGS 81


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 8   PMHFAVFTVTALHVFVCHNGS 70
           P+    F  TAL +F C  GS
Sbjct: 294 PVKCLAFFCTALVIFYCQEGS 314


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 8   PMHFAVFTVTALHVFVCHNGS 70
           P+    F  TAL +F C  GS
Sbjct: 294 PVKCLAFFCTALVIFYCQEGS 314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,326
Number of Sequences: 336
Number of extensions: 1995
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)