Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_G01
         (496 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83107-7|CAB05501.2|  537|Caenorhabditis elegans Hypothetical pr...    31   0.61 
Z81070-5|CAB02999.2|   84|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF003136-6|AAK21375.2|  384|Caenorhabditis elegans Hypothetical ...    29   2.4  

>Z83107-7|CAB05501.2|  537|Caenorhabditis elegans Hypothetical
           protein F32A7.6 protein.
          Length = 537

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 144 GRNVVTN-FVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPY 287
           GRN   N FV    NGG+ G+N  +D +   + TL F +   SG  A Y
Sbjct: 264 GRNGKGNIFVWASGNGGVNGDNCAYDGYVSNEYTLSFGVIDASGAPAAY 312


>Z81070-5|CAB02999.2|   84|Caenorhabditis elegans Hypothetical
           protein F26E4.6 protein.
          Length = 84

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +3

Query: 183 NGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 314
           N G     LPF + N++      + +   G  AP+++  +QL K
Sbjct: 38  NDGWASARLPFHVTNKWGFAAKAVTFLAIGFWAPFIVVEYQLRK 81


>Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical
           protein F43A11.4 protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 205 FSPGIPPLEWFLTKFVTTFLPNLFEMRVNGVIIFTFLR 92
           FSP   PL WF    +T  +  +F +  N +II +F+R
Sbjct: 3   FSPDADPLNWFAASVMT--INGVFGITCNTLIIASFIR 38


>AF003136-6|AAK21375.2|  384|Caenorhabditis elegans Hypothetical
           protein F28B3.3 protein.
          Length = 384

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 145 PNLFEMRVNGVII-FTFLRFSSRYHSKKQKFDFANSTVGILKTTTHRP 5
           P + ++RVNG II  T +R S+ Y S + +      T+G   +T  RP
Sbjct: 90  PQITKLRVNGRIIRVTAIRQSAYYSSSEDEDSVNGGTLGRKDSTLTRP 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,719,712
Number of Sequences: 27780
Number of extensions: 194922
Number of successful extensions: 419
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)