Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_F23
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 34 0.13
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 34 0.13
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 34 0.13
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 33 0.17
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 33 0.23
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 33 0.30
SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 32 0.53
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 31 0.70
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) 29 4.9
SB_16838| Best HMM Match : TolA (HMM E-Value=2) 28 6.5
SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2) 28 6.5
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 28 8.6
SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 28 8.6
SB_10476| Best HMM Match : Lactamase_B (HMM E-Value=7.4e-08) 28 8.6
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 28 8.6
SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9) 28 8.6
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 395 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 553
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNR 143
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 395 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 553
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR
Sbjct: 326 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNR 377
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 395 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 553
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNR 143
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 395 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 553
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNR 143
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 395 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 553
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + +NR
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNR 143
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 407 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRGVFVAQ 571
D L DVS + PEE+ VK ++L V A+ E + R++NR + Q
Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQECEEHGFFTARQFNRHFVLPQ 78
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 407 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 553
D L DVS + PEE+ VK ++L V A+ E + R++NR
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQECEEHGFFTARQFNR 144
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 425 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 553
+ DV+ + PE I V+ + N+LLV+A HE + + +NR
Sbjct: 100 MAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGHYHAMHFNR 142
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 416 TLKL-RFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRGVFVAQG 574
TL++ + DV +Y PEEI K + + V +H + + +E+ R + +G
Sbjct: 6 TLEIAKLDVKEYRPEEISFKVENGVVKVQGRHVNEGEFGFELKEFRRTFTLPEG 59
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 558 FLLPKGTNPEAIKSSLSRDGVLTVEA 635
F LP+G +PE + S +S G L +EA
Sbjct: 54 FTLPEGIDPENVTSRISNHGHLHIEA 79
>SB_45697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 182 IDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQL 352
++ E SS+RE DA RKM ++SK +L +E+N + QHSD+ +L
Sbjct: 255 LEKEISSLREIVDARERKM-VQLSKDNIDL--QETNAILRSQLEQLESMQHSDNAEL 308
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 401 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKS----DTKSVYREYN 550
EGD K DV Y PEEI +K ++ + KH+ + +T +R YN
Sbjct: 36 EGD-KVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSEGEHGYETSEFHRSYN 88
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 401 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNR 553
E + DV + PE I V+ + N+LLV A HE + + +NR
Sbjct: 93 ESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGHYHAMHFNR 143
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 428 RFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNRGVFVAQG 574
+ DV +Y PEEI K + + V +H + +E+ R + +G
Sbjct: 12 KLDVREYRPEEISFKVENGVVKVQGRHVNEGPFGFELKEFRRTFTLPEG 60
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 136 WSQEKYPHQAWRFFGYRY-RILKHQRALRCRNEEDGRRNEQIQI-RTHEQRKQQFLQE 303
W Q+ PH GYRY + +KH + R R + Q+QI R E+RKQ L +
Sbjct: 127 WQQKYGPHYKKLDLGYRYLKRIKHVSFDQIRE----RASAQLQIERERERRKQDLLMK 180
>SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11)
Length = 672
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 137 GLKRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNRES 286
G K+N K S D+ S++ FD+E K+ E FR++ NR+S
Sbjct: 52 GKKKNGAAKGKIVSKSDSLRSALSFDFDSETEKIRREYEVFRAQQANRDS 101
>SB_16838| Best HMM Match : TolA (HMM E-Value=2)
Length = 371
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 109 ANNVKNG*QWSQEKYPHQAWRFFGYRYRIL-KHQRALRCRNEEDGRRNEQIQIRTHEQRK 285
+ N N Q Q+K Q R + Y + K Q+ + R ++ +R +Q Q +QR+
Sbjct: 28 SRNNSNNVQLQQQKRQQQQKRTYNYDIQQQQKRQQQQQKRQQQKQKRQQQEQKLQQQQRR 87
Query: 286 QQ 291
QQ
Sbjct: 88 QQ 89
>SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2)
Length = 474
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 165 SLMGIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNTFHWNNTHSTADKT 16
SL GI LL + + I ++E +E + KR R + +W+ TH + T
Sbjct: 412 SLAGIVLLN--TQLLCCIVKLEKMEKGRAQKRKRKRSNYWDTTHQESTDT 459
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 338 DSRQLAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEE 460
DS + E + WD+ + D+GD KT++ D S Y E
Sbjct: 1566 DSHEGKEKNEWDNYDGD--NDDGDSKTIEANKDKSVYHHSE 1604
>SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 267 NS*TEKATISSRAQLARRHLHSIVTADSLPSPVTGI 374
N + T + +A+ HS+ T + LP+PV GI
Sbjct: 77 NDSSVSVTDAHKAETLNTFFHSVFTQEQLPTPVLGI 112
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 163 AWRFFGYRYRILKHQRALRCRNEEDGRRNEQIQIRTHEQR 282
+WR G + +L+ + + CRN+ R EQI +R H R
Sbjct: 592 SWRL-GTSFFLLEDGKVI-CRNDYGDRDEEQIVLRVHHMR 629
>SB_10476| Best HMM Match : Lactamase_B (HMM E-Value=7.4e-08)
Length = 866
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +3
Query: 453 PKRSLLRLSTTNYWSTPNTRRNL 521
P+RS+ R++ +YW+ PN+ ++L
Sbjct: 58 PRRSVFRVTCRHYWNGPNSCQSL 80
>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
Length = 1024
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +2
Query: 101 STRQIT*KMADSGLKRNIPIK----LGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSE 268
S R+I K DS KR I + + DF V E S+ + D EMRK + + + +
Sbjct: 551 SNREIQEKQEDSE-KRLIDLPPTPDIMDFKVKSAEIKSLAKSVDNEMRKFQVQQANEHIK 609
Query: 269 LMN 277
++N
Sbjct: 610 MLN 612
>SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9)
Length = 646
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 392 IQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 550
IQ G+T ++ S+Y E V +DN+ ++ +K EE K+V E++
Sbjct: 57 IQIVSQGETFRVFDGSSRYIGEAEVTTILDNQQILGSKMEESGLNKTVTVEFD 109
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,151,321
Number of Sequences: 59808
Number of extensions: 438211
Number of successful extensions: 1377
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -