Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_F22
         (515 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1010 + 26879258-26879503                                         61   6e-10
05_02_0116 + 6773659-6774437,6775103-6775298,6775381-6775565,677...    27   8.9  

>06_03_1010 + 26879258-26879503
          Length = 81

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 26/46 (56%), Positives = 35/46 (76%)
 Frame = +1

Query: 178 PCPCGDRFQISKEELMAGEEVATCPSCSLVVKVIYDLEKFKAESEE 315
           PCPCGD FQI+  +L  GEE+A CPSCSL + V+Y+ E F A+++E
Sbjct: 24  PCPCGDLFQITLADLRLGEEIARCPSCSLFLTVVYNEEDF-ADAKE 68


>05_02_0116 +
           6773659-6774437,6775103-6775298,6775381-6775565,
           6775746-6776079,6776174-6776378,6776692-6776834,
           6777081-6777233
          Length = 664

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 65  PANSILYRPHASCMFR 18
           PANS+LY   A+CMF+
Sbjct: 449 PANSVLYCNRAACMFK 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,297,640
Number of Sequences: 37544
Number of extensions: 120947
Number of successful extensions: 219
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)