Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_F19
(509 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein. 134 2e-31
CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein. 134 2e-31
CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein. 134 2e-31
BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein. 134 2e-31
AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase (ubi... 134 2e-31
AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone oxidore... 134 2e-31
BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5 ... 40 0.007
BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5 ... 40 0.007
BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2 ... 32 1.0
BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2 ... 32 1.0
Z25535-1|CAA80982.1| 1475|Homo sapiens nuclear pore complex prot... 29 9.4
BC052965-1|AAH52965.1| 1475|Homo sapiens nucleoporin 153kDa prot... 29 9.4
AL157776-1|CAI16393.1| 1475|Homo sapiens nucleoporin 153kDa prot... 29 9.4
AL138824-2|CAI12246.1| 1475|Homo sapiens nucleoporin 153kDa prot... 29 9.4
AL138724-1|CAI40945.1| 1475|Homo sapiens nucleoporin 153kDa prot... 29 9.4
AB210024-1|BAE06106.1| 1455|Homo sapiens NUP153 variant protein ... 29 9.4
>CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 134 bits (324), Expect = 2e-31
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +2
Query: 53 RQAIKVGTKTVKPVLSSSHAEARNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 232
RQA + VKP+ S EA+ V LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 233 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 412
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 413 E 415
+
Sbjct: 127 D 127
>CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 134 bits (324), Expect = 2e-31
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +2
Query: 53 RQAIKVGTKTVKPVLSSSHAEARNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 232
RQA + VKP+ S EA+ V LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 233 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 412
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 413 E 415
+
Sbjct: 127 D 127
>CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein.
Length = 154
Score = 134 bits (324), Expect = 2e-31
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +2
Query: 53 RQAIKVGTKTVKPVLSSSHAEARNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 232
RQA + VKP+ S EA+ V LY+AWYR++P V + + + R+K++E+
Sbjct: 33 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 92
Query: 233 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 412
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 93 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 152
Query: 413 E 415
+
Sbjct: 153 D 153
>BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein.
Length = 128
Score = 134 bits (324), Expect = 2e-31
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +2
Query: 53 RQAIKVGTKTVKPVLSSSHAEARNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 232
RQA + VKP+ S EA+ V LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 233 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 412
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 413 E 415
+
Sbjct: 127 D 127
>AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 6, 14kDa protein.
Length = 154
Score = 134 bits (324), Expect = 2e-31
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +2
Query: 53 RQAIKVGTKTVKPVLSSSHAEARNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 232
RQA + VKP+ S EA+ V LY+AWYR++P V + + + R+K++E+
Sbjct: 33 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 92
Query: 233 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 412
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 93 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 152
Query: 413 E 415
+
Sbjct: 153 D 153
>AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B14 protein.
Length = 128
Score = 134 bits (324), Expect = 2e-31
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +2
Query: 53 RQAIKVGTKTVKPVLSSSHAEARNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 232
RQA + VKP+ S EA+ V LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 233 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 412
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 413 E 415
+
Sbjct: 127 D 127
>BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 39.5 bits (88), Expect = 0.007
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +2
Query: 119 RNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 298
R VL LYK + Y+ +DY PK +++LK +F+KNK V + I L+ +G+
Sbjct: 6 RGEVLKLYK----NLLYLGRDY--PKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEF 59
Query: 299 ELKE 310
+KE
Sbjct: 60 VMKE 63
>BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 39.5 bits (88), Expect = 0.007
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +2
Query: 119 RNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 298
R VL LYK + Y+ +DY PK +++LK +F+KNK V + I L+ +G+
Sbjct: 6 RGEVLKLYK----NLLYLGRDY--PKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEF 59
Query: 299 ELKE 310
+KE
Sbjct: 60 VMKE 63
>BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +2
Query: 119 RNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 298
R VL LY+ + I + D D ++ +E F +NK T+ I M++ +G M
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSD----RKYLKDWAREEFRRNKSATEEDTIRMMITQGNM 74
Query: 299 ELKE 310
+LKE
Sbjct: 75 QLKE 78
>BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +2
Query: 119 RNXVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 298
R VL LY+ + I + D D ++ +E F +NK T+ I M++ +G M
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSD----RKYLKDWAREEFRRNKSATEEDTIRMMITQGNM 74
Query: 299 ELKE 310
+LKE
Sbjct: 75 QLKE 78
>Z25535-1|CAA80982.1| 1475|Homo sapiens nuclear pore complex protein
hnup153 protein.
Length = 1475
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 5 LCWIESQXDSL*KCLARQAIKVGTKTVKPVLSSSHAEARNXVLSLYK 145
LC ++++ DS KCLA ++ K GTK+ +S + + + S +K
Sbjct: 859 LCLVQNKADST-KCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFK 904
>BC052965-1|AAH52965.1| 1475|Homo sapiens nucleoporin 153kDa
protein.
Length = 1475
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 5 LCWIESQXDSL*KCLARQAIKVGTKTVKPVLSSSHAEARNXVLSLYK 145
LC ++++ DS KCLA ++ K GTK+ +S + + + S +K
Sbjct: 859 LCLVQNKADST-KCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFK 904
>AL157776-1|CAI16393.1| 1475|Homo sapiens nucleoporin 153kDa
protein.
Length = 1475
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 5 LCWIESQXDSL*KCLARQAIKVGTKTVKPVLSSSHAEARNXVLSLYK 145
LC ++++ DS KCLA ++ K GTK+ +S + + + S +K
Sbjct: 859 LCLVQNKADST-KCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFK 904
>AL138824-2|CAI12246.1| 1475|Homo sapiens nucleoporin 153kDa
protein.
Length = 1475
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 5 LCWIESQXDSL*KCLARQAIKVGTKTVKPVLSSSHAEARNXVLSLYK 145
LC ++++ DS KCLA ++ K GTK+ +S + + + S +K
Sbjct: 859 LCLVQNKADST-KCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFK 904
>AL138724-1|CAI40945.1| 1475|Homo sapiens nucleoporin 153kDa
protein.
Length = 1475
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 5 LCWIESQXDSL*KCLARQAIKVGTKTVKPVLSSSHAEARNXVLSLYK 145
LC ++++ DS KCLA ++ K GTK+ +S + + + S +K
Sbjct: 859 LCLVQNKADST-KCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFK 904
>AB210024-1|BAE06106.1| 1455|Homo sapiens NUP153 variant protein
protein.
Length = 1455
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 5 LCWIESQXDSL*KCLARQAIKVGTKTVKPVLSSSHAEARNXVLSLYK 145
LC ++++ DS KCLA ++ K GTK+ +S + + + S +K
Sbjct: 839 LCLVQNKADST-KCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFK 884
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,178,017
Number of Sequences: 237096
Number of extensions: 1321726
Number of successful extensions: 3623
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3623
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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