Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_F19
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-56|CAB16513.1|  131|Caenorhabditis elegans Hypothetical p...    74   5e-14
U10402-9|AAA19065.1|  892|Caenorhabditis elegans Gro-1 operon ge...    32   0.21 
AY052769-1|AAL14108.1|  885|Caenorhabditis elegans GOP-1 protein.      32   0.21 
Z82076-2|CAB04938.1|  360|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U53139-7|AAK18935.1|  235|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AC006674-13|AAF39942.1|  281|Caenorhabditis elegans Hypothetical...    28   3.4  
AF002198-8|AAF99931.2|  300|Caenorhabditis elegans Serpentine re...    27   6.0  
Z81513-5|CAB04175.1|  332|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z99281-56|CAB16513.1|  131|Caenorhabditis elegans Hypothetical
           protein Y57G11C.12b protein.
          Length = 131

 Score = 74.1 bits (174), Expect = 5e-14
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
 Frame = +2

Query: 77  KTVKPVLSSSHAEARNXVLSLYKAWYRQIPYIVKDYDIPKSEAQC-REKLKELFIKNKHV 253
           +TV P+ S++ AEAR  VL+ YK + R  P    D+ +        R  +K+ F KN H+
Sbjct: 17  RTVAPIKSNNSAEARMSVLAAYKEFQRLTPKFWWDFGLHDMPLGVFRAVIKKQFTKNGHL 76

Query: 254 TDIRVIDMLVIKGQMELKESVNIWKQKGHIMAY-FKPTEEPKPKNFLSKFFSGNE 415
           TD+RV+D LV +    +K     +    H+  Y F    E KPK+FLSKF +G E
Sbjct: 77  TDVRVVDRLVGETHQHMKSIRYAFYNPDHVRNYLFAENVEAKPKDFLSKFLNGKE 131


>U10402-9|AAA19065.1|  892|Caenorhabditis elegans Gro-1 operon gene
           protein 1 protein.
          Length = 892

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -2

Query: 334 LLFPYVHRLFQLHLTLNNQHINDSNISHMFVL-NEE----FFQFLSTLCF*LGNVIILHY 170
           +LF  +     L+  L+N H+N S ISH F L N+E    +  FL TL F L    I  +
Sbjct: 99  ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 157

Query: 169 IGDLT 155
             + T
Sbjct: 158 FNETT 162


>AY052769-1|AAL14108.1|  885|Caenorhabditis elegans GOP-1 protein.
          Length = 885

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -2

Query: 334 LLFPYVHRLFQLHLTLNNQHINDSNISHMFVL-NEE----FFQFLSTLCF*LGNVIILHY 170
           +LF  +     L+  L+N H+N S ISH F L N+E    +  FL TL F L    I  +
Sbjct: 92  ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 150

Query: 169 IGDLT 155
             + T
Sbjct: 151 FNETT 155


>Z82076-2|CAB04938.1|  360|Caenorhabditis elegans Hypothetical
           protein W07G1.6 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
 Frame = -2

Query: 382 FWFRFFCWFEVSHNVPLLFPYVHRLF---QLHLTLNNQHINDSNISHMFVLNEEFFQFLS 212
           F F F  WFE    + L++PY + L      H+   N   +D  I           ++  
Sbjct: 67  FSFYFGAWFECWLGLVLVWPYKNGLVLVEDTHMKFTNFETSDRTIM------AHITKYPE 120

Query: 211 TLCF*LGNVIILHYIGDLTI-PCFVKTQNXIPSF 113
           T C   G+ +I HY+       C    +  I SF
Sbjct: 121 TTCLLFGSFLIWHYLASTVAGMCNFVIERAIASF 154


>U53139-7|AAK18935.1|  235|Caenorhabditis elegans Hypothetical
           protein F18E3.10 protein.
          Length = 235

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 390 FRNSFLETNDLFIYFVHILKLLNL 461
           FRNSFLE++    Y +HIL  + +
Sbjct: 5   FRNSFLESDRFLAYALHILSAIEI 28


>AC006674-13|AAF39942.1|  281|Caenorhabditis elegans Hypothetical
           protein K12H6.7 protein.
          Length = 281

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 359 PTEEPKPKNFLSKFFSGNE*FIYLLCTYLEI 451
           P E PK  NF+S FF  N   +Y   T+++I
Sbjct: 227 PAERPKEFNFVSTFFPENFNKVYDCSTWMDI 257


>AF002198-8|AAF99931.2|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 3 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 348 AIMCPFCFHMFTDSFNSI*PLITSISMTRISVTCLFL 238
           AI  P  FH + DS+ SI  L+ +IS++      ++L
Sbjct: 115 AIYTPIMFHKYRDSYPSIIILMLAISLSMFENLLMYL 151


>Z81513-5|CAB04175.1|  332|Caenorhabditis elegans Hypothetical
           protein F26D2.4 protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +3

Query: 387 SFRNSFLETNDLFIYFVHILKLLNL 461
           ++R+SFLE+++ + Y +H L +  +
Sbjct: 4   TYRHSFLESDEFYAYSLHFLSIFQI 28


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,854,065
Number of Sequences: 27780
Number of extensions: 217702
Number of successful extensions: 652
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)