Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_F15
         (410 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812...    91   4e-19
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338     90   6e-19
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228...    90   6e-19
08_02_0329 - 15833124-15833825                                         29   1.4  
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903...    28   3.3  
09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283     28   3.3  
07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,324...    28   3.3  

>12_02_0486 +
           19577507-19577568,19578119-19578218,19581128-19581214,
           19581852-19581914
          Length = 103

 Score = 90.6 bits (215), Expect = 4e-19
 Identities = 38/55 (69%), Positives = 41/55 (74%)
 Frame = +2

Query: 110 MGHANXWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 274
           MGH+N W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K+
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKV 55


>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
          Length = 56

 Score = 90.2 bits (214), Expect = 6e-19
 Identities = 38/54 (70%), Positives = 40/54 (74%)
 Frame = +2

Query: 110 MGHANXWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 271
           MGH+N W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>03_06_0123 -
           31821915-31822094,31822187-31822324,31822413-31822817,
           31822897-31823212,31823305-31823543,31823800-31823903,
           31823987-31824145,31824326-31824510,31825318-31825427,
           31826900-31826947,31827047-31827241,31827354-31827422,
           31829521-31829620,31829879-31829940
          Length = 769

 Score = 90.2 bits (214), Expect = 6e-19
 Identities = 38/54 (70%), Positives = 40/54 (74%)
 Frame = +2

Query: 110 MGHANXWYSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 271
           MGH+N W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>08_02_0329 - 15833124-15833825
          Length = 233

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 86  ANEQQIRDTXQDGELERKNDKLKKPSAG 3
           +N+QQ +   Q  +L +KN+K KKP  G
Sbjct: 36  SNQQQQQQQQQQQDLSKKNNKKKKPHRG 63


>12_02_1151 +
           26488686-26488792,26488897-26489142,26490246-26490381,
           26490502-26490561,26490648-26490740,26491421-26491663,
           26491828-26491968,26492312-26492482,26492813-26492899,
           26492954-26493211,26493300-26493445,26493535-26493922,
           26493935-26494092,26494267-26494540,26494721-26494894
          Length = 893

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 136 RIPXICVAHFKKLNCXALTSNKLET 62
           R+P I + H K+ +    T NKLET
Sbjct: 764 RLPEILIIHLKRFSYSRYTKNKLET 788


>09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283
          Length = 205

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 136 RIPXICVAHFKKLNCXALTSNKLET 62
           R+P + V H K+ +    T NKLET
Sbjct: 130 RLPEVLVIHLKRFSYTQFTRNKLET 154


>07_01_0426 +
           3239274-3239386,3239472-3239702,3242516-3242642,
           3242729-3242788,3242868-3242960,3243073-3243369,
           3243450-3243761,3243857-3244114,3244227-3244375,
           3244470-3245102,3245367-3245640,3245736-3245777,
           3246332-3246586,3246700-3246711
          Length = 951

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 136 RIPXICVAHFKKLNCXALTSNKLET 62
           R+P + V H K+ +    T NKLET
Sbjct: 777 RLPEVLVIHLKRFSYTQFTRNKLET 801


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,006,414
Number of Sequences: 37544
Number of extensions: 140719
Number of successful extensions: 253
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)