Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_F09
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    26   0.33 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   4.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   4.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   4.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   4.0  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   4.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.3  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +2

Query: 56  CIEIKRG---SSKRETFINCLKPASHILGASS 142
           CI I  G    S    FINC   + H+LG+SS
Sbjct: 6   CIPISSGRTNGSNFSKFINCHYTSGHLLGSSS 37


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -2

Query: 249 VCSSISCDVIQEASHAVYQIR 187
           +C  +   V+Q+ SH +Y ++
Sbjct: 130 LCQELGISVVQKVSHTLYHLQ 150


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 500 EIGQILPLPPNAKYVGGHHIE 562
           E  Q   +PP   + G HHI+
Sbjct: 36  EYNQNSYIPPGGDFFGNHHIQ 56


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 500 EIGQILPLPPNAKYVGGHHIE 562
           E  Q   +PP   + G HHI+
Sbjct: 36  EYNQNSYIPPGGDFFGNHHIQ 56


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 332 PASSPSPESHKEARPLQRT 276
           P  +PSP S   + P QRT
Sbjct: 71  PQGAPSPSSTPSSLPTQRT 89


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 500 EIGQILPLPPNAKYVGGHHIE 562
           E  Q   +PP   + G HHI+
Sbjct: 36  EYNQNSYIPPGGDFFGNHHIQ 56


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 500 EIGQILPLPPNAKYVGGHHIE 562
           E  Q   +PP   + G HHI+
Sbjct: 36  EYNQNSYIPPGGDFFGNHHIQ 56


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 385 LDVVDHVSDPTT*IH 341
           +DVV+H+S  +T IH
Sbjct: 120 IDVVNHLSSDSTTIH 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,867
Number of Sequences: 336
Number of extensions: 4510
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)