Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_F09
(847 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44502| Best HMM Match : UDPGT (HMM E-Value=2e-05) 41 0.001
SB_9495| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_26422| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.014
SB_17368| Best HMM Match : Glyco_tran_28_C (HMM E-Value=1.3) 33 0.22
SB_5811| Best HMM Match : IKI3 (HMM E-Value=0.0021) 33 0.29
SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004) 32 0.51
SB_22264| Best HMM Match : UDPGT (HMM E-Value=6.4e-11) 32 0.51
SB_37482| Best HMM Match : WD40 (HMM E-Value=1.1e-05) 31 1.6
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 29 6.3
SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44) 29 6.3
SB_54326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_11615| Best HMM Match : EGF (HMM E-Value=0.076) 28 8.3
>SB_44502| Best HMM Match : UDPGT (HMM E-Value=2e-05)
Length = 261
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 608 AKHGAILFSADSKVLPW--YVKRTLLHVFSQFDQITIWETGEXLTDIPDNVYVFKQLPRL 781
A+HG +L S S V+ V L +VFS+ I + G+ DNV + K +P+
Sbjct: 34 AEHGVVLVSFGSMVMSLDDAVVSKLANVFSKLKYKVIIKFGDSFPKT-DNVMLVKWMPQN 92
Query: 782 RILNHNNTVLLITNGGTTSL 841
IL ++N L IT+GG S+
Sbjct: 93 DILANSNVKLFITHGGANSV 112
>SB_9495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 39.5 bits (88), Expect = 0.003
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 6/157 (3%)
Frame = +2
Query: 377 YVESPAYYELYQSVLQHRGLSPSQ-YETVLYNASLLLINSDPEIGQILPLPPNAKYVGG- 550
+++ +Y Y + + P + L SL+L+ +D + PLPP K VG
Sbjct: 344 WIKEAYFYPGYDELKAKYRIKPEKTIRESLMTVSLILMEADFVLAHAQPLPPFVKEVGFL 403
Query: 551 HHIEXXXXXXXXXXXXXXXAKHGAIL--FSADSKVLPWYVKRTLLHVFSQFDQITIWET- 721
G +L FS + V L F + +W+
Sbjct: 404 TPSPARPLPADLENFMHGSGDEGVVLVSFSTYMDDMNQNVLDRLSSAFRKISHKVLWKVD 463
Query: 722 -GEXLTDIPDNVYVFKQLPRLRILNHNNTVLLITNGG 829
G + DNV + + +P+ IL HN T L IT+ G
Sbjct: 464 EGSYPNSVSDNVKLVEWMPQNDILGHNKTRLFITHAG 500
>SB_26422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 536
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 686 FSQFDQITIWET--GEXLTDIPDNVYVFKQLPRLRILNHNNTVLLITNGGTTSL 841
F+Q IW G + DNV + + +P+ IL HNNT L I +GG +
Sbjct: 336 FAQLPHKIIWRVYPGNYPKSVSDNVKLVEWVPQNDILGHNNTKLFINHGGANGM 389
>SB_17368| Best HMM Match : Glyco_tran_28_C (HMM E-Value=1.3)
Length = 157
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 674 LLHVFSQFDQITIWE---TGEXLTDIPDNVYVFKQLPRLRILNHNNTVLLITNGGTTSL 841
+L FSQ Q + + G +P NV K LP+ +L H+ T L IT+ G L
Sbjct: 42 MLKAFSQMPQNVLVKLDLNGLPKDSVPPNVRAVKWLPQNDVLGHSKTKLFITHAGANGL 100
>SB_5811| Best HMM Match : IKI3 (HMM E-Value=0.0021)
Length = 567
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 290 ALP-PYGFRERVMRLARQVYLSGWITYMIH--YVESPAYYELYQSVLQHRG 433
A+P Y FR VMR YLSGW+ +I ++ S Y SVL+ RG
Sbjct: 318 AIPRSYRFRSAVMRTDTSHYLSGWLVKLISITFLTSLLAQGAYASVLRMRG 368
>SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004)
Length = 969
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 740 IPDNVYVFKQLPRLRILNHNNTVLLITNGGTTSL 841
IP NV K LP+ +L H+ T L IT+ G L
Sbjct: 112 IPSNVRTVKWLPQNDLLGHSKTKLFITHAGANGL 145
>SB_22264| Best HMM Match : UDPGT (HMM E-Value=6.4e-11)
Length = 385
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 740 IPDNVYVFKQLPRLRILNHNNTVLLITNGGTTSL 841
IP NV K LP+ +L H+ T L IT+ G L
Sbjct: 202 IPSNVRTVKWLPQNDLLGHSKTKLFITHAGANGL 235
>SB_37482| Best HMM Match : WD40 (HMM E-Value=1.1e-05)
Length = 433
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -2
Query: 255 GLVC--SSISCDVIQEASHAVYQIRGHSKTAANLFFWPIPDEAPKMWDAGFRQLIKVSRL 82
G +C + ++C +S VY HS +L F PD+ K++ + ++ + L
Sbjct: 167 GFLCKMNQLACKGSSSSSEGVYLFEPHSNVIPSLAF--DPDDTTKLYSCSYDGTLRCADL 224
Query: 81 LLPRFISIQL 52
+P F + L
Sbjct: 225 TVPVFHEVDL 234
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 335 VPASSPSPESHKEARPLQRTVDQCCTLD-WSAPALAVTSSRRHRMRCTKS 189
VP ++PS S P+ ++ QC T+D P+L + R R T S
Sbjct: 1233 VPTTTPSASSSPTISPIGSSLAQCSTVDSMDKPSLRPIGTERACRRATAS 1282
>SB_23194| Best HMM Match : IF_tail (HMM E-Value=1.26117e-44)
Length = 788
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +2
Query: 653 PWYVKRTLLHVFSQFDQITIWETGEXLTDIPDNVYVFKQLPRLRILNHNNTVLLITNG 826
P K T +V +T+W T P + VFKQLP N T L+ G
Sbjct: 685 PSVYKFTPKYVLKSQSHVTVWSAQGGGTHKPPSDLVFKQLPSWGSGNEARTALVNAGG 742
>SB_54326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = -2
Query: 336 RASLITLSRKP*GGKAASEDSRSVLYTGLVCSSISCDVIQEASHAVYQIRGHSKTAANLF 157
R + + S+ P GK ++ YTGL+CS + + A + + ++ + N+
Sbjct: 15 RENGMDFSKFPYRGKCKENATKQGYYTGLICSFLRKQSLSTAVNVLNKLENENSRERNIL 74
Query: 156 FWPI 145
P+
Sbjct: 75 QKPV 78
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -3
Query: 452 RIETEKG--LYAGAPIDRVRNKQETRRSGSCK*SNHLDTLD-VPASSPSPESHKEARP 288
R++ + G + G +++ + E+ SGS ++ D LD +P SP P S +EA+P
Sbjct: 246 RVDDQSGEDVSDGPKATQIQREHESPDSGS----DYEDALDNIPPGSPRPSSAQEAKP 299
>SB_11615| Best HMM Match : EGF (HMM E-Value=0.076)
Length = 262
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 648 TLLSALNNIAPCLALSNKSCKFCGKSDGN 562
++ S NN++P L NKS FC ++GN
Sbjct: 61 SVTSPFNNLSPQLTSDNKSYIFCVMNNGN 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,998,787
Number of Sequences: 59808
Number of extensions: 577447
Number of successful extensions: 1729
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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