Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_F09
         (847 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    25   2.9  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.8  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.8  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.8  

>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 297 GKAASEDSRSVLYTGLVCSSISCDVIQEASHAVYQIR 187
           G+A   + R  + T LVC SI    +   +H  +  R
Sbjct: 322 GRAVPTEQRETIATDLVCRSIGYRAVSVDNHINFDAR 358


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 666 LTYQGKTLLSALNNIAPCLALS 601
           +T + KTL   +N I PC+ +S
Sbjct: 237 ITMRRKTLFYTVNIIIPCMGIS 258


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 666 LTYQGKTLLSALNNIAPCLALS 601
           +T + KTL   +N I PC+ +S
Sbjct: 237 ITMRRKTLFYTVNIIIPCMGIS 258


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 666 LTYQGKTLLSALNNIAPCLALS 601
           +T + KTL   +N I PC+ +S
Sbjct: 233 ITMRRKTLFYTVNLIIPCMGIS 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 908,803
Number of Sequences: 2352
Number of extensions: 19124
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)