Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_F07
(554 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 127 7e-30
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 115 3e-26
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 77 1e-14
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 77 1e-14
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 69 3e-12
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 36 0.029
SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07) 34 0.090
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 30 1.1
SB_4877| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4) 30 1.5
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 29 3.4
SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0) 29 3.4
SB_19459| Best HMM Match : PkinA_anch (HMM E-Value=0.99) 28 4.5
SB_14609| Best HMM Match : PkinA_anch (HMM E-Value=0.99) 28 4.5
SB_3160| Best HMM Match : PkinA_anch (HMM E-Value=0.99) 28 4.5
SB_57232| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_38822| Best HMM Match : PkinA_anch (HMM E-Value=0.99) 28 4.5
SB_29325| Best HMM Match : PkinA_anch (HMM E-Value=0.99) 28 4.5
SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07) 28 4.5
SB_15406| Best HMM Match : PkinA_anch (HMM E-Value=0.99) 28 4.5
SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_48924| Best HMM Match : 7tm_2 (HMM E-Value=1.5e-16) 27 7.8
SB_6577| Best HMM Match : E_raikovi_mat (HMM E-Value=4.4) 27 7.8
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 127 bits (306), Expect = 7e-30
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = +2
Query: 230 ESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 409
ESTLHLVLRLRGG IEPSLRILA KYNC+KMICRKCYARLHPRATNCRK KCGH+NNLRP
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHSNNLRP 73
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 115 bits (276), Expect = 3e-26
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = +2
Query: 158 QQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 331
QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG IEPSLRILA KYNC+KMICR
Sbjct: 6 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICR 63
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 38
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 114
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 190
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 266
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 342
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 374 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 418
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 494
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 38
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 114
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 190
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 266
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/45 (75%), Positives = 35/45 (77%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 342
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 38
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
MQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 38
Score = 47.2 bits (107), Expect = 9e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQI VK TL+VEASDT+E+VK KIQ +EGIPP
Sbjct: 70 VLRLRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPP 113
Score = 35.1 bits (77), Expect = 0.039
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVL 253
K K + R+ QRL++ ++L R+L+DYNI++ S LHL L
Sbjct: 102 KEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFL 146
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 230 ESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 331
ESTLHLVLRLRGG IEPSLRILA KYNC+KMICR
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICR 47
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1
Query: 34 NTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
+TMQIFVKTL G ITLEVE SDT+ENVKAKIQ KEGIPP
Sbjct: 77 STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 116
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQK 229
K K + ++ QQRLIFAGKQLE GRTLSDYNIQK
Sbjct: 105 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 35.5 bits (78), Expect = 0.029
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 152 QSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 292
+ QQRL+F G+ L T I +TLHL++RL GG P+ R+
Sbjct: 109 KDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGGEC-PTYRL 154
>SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07)
Length = 642
Score = 33.9 bits (74), Expect = 0.090
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -2
Query: 439 GYYLILDLLFGSQIVSVSALCLATVGSTRMKTGIAFTANHF 317
G +++ LL G+ V +S+LC A GS KTG ++T +F
Sbjct: 19 GPAIVISLLIGAIPVCLSSLCYAEFGSRISKTGSSYTYTYF 59
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 31.9 bits (69), Expect = 0.36
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKE 141
M ++++TL G L V +T+ +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 123 SFDIFESVGSFHLQCNGXPRKGFDEDLHCVAPMKN 19
S DIFE++ +FH Q D+ + C+ P+++
Sbjct: 476 STDIFETLSNFHSQIGPKKTSNADDGITCIVPLQS 510
>SB_4877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 123 SFDIFESVGSFHLQCNGXPRKGFDEDLHCVAPMKN 19
S DIFE++ +FH Q D+ + C+ P+++
Sbjct: 457 STDIFETLSNFHSQIGPKKTSNADDGITCIVPLQS 491
>SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4)
Length = 248
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 PIT--LEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRET 186
P+T + V+AS T V AK+ A P P T+ +C ET
Sbjct: 166 PVTAKVNVDASPTPTPVTAKVNADTSPTPTPVTAKVCVET 205
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -2
Query: 385 ALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGRFNCTSSKSQNQVKCGFFL 224
++ L TV S +KT + TA H + VI +NA CT S S N + FFL
Sbjct: 1395 SVSLTTVRSPSVKT-VKTTAAH-IAVIKARDNAFELTPCTISSSGNSICISFFL 1446
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 356 EDEDGHSIYGKSFSHSYTSWRECEGKV 276
++E I SFS T WR CEG++
Sbjct: 775 DEEMNQVIISSSFSAKLTKWRVCEGQI 801
>SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 746
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 406 SQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKG 281
S + LC+ +G+ + GIAF A L ++ G+NA+G
Sbjct: 252 SLLAQTLKLCIPKIGAFVIVYGIAFFAYAQLACLVFGQNAEG 293
>SB_19459| Best HMM Match : PkinA_anch (HMM E-Value=0.99)
Length = 148
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 49 FVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRETIRXW 198
FV + G T E+E+ T VK +++K+GIP SHL R W
Sbjct: 79 FVDPVTGVN-TQEIES--TWARVKRMVKSKKGIPTADLQSHLDEVMWRQW 125
>SB_14609| Best HMM Match : PkinA_anch (HMM E-Value=0.99)
Length = 151
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 49 FVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRETIRXW 198
FV + G T E+E+ T VK +++K+GIP SHL R W
Sbjct: 82 FVDPVTGVN-TQEIES--TWARVKRMVKSKKGIPTADLQSHLDEVMRRQW 128
>SB_3160| Best HMM Match : PkinA_anch (HMM E-Value=0.99)
Length = 248
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 49 FVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRETIRXW 198
FV + G T E+E+ T VK +++K+GIP SHL R W
Sbjct: 179 FVDPVTGVN-TQEIES--TWARVKRMVKSKKGIPTADLQSHLDEVMWRQW 225
>SB_57232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 49 FVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRETIRXW 198
FV + G T E+E+ T VK +++K+GIP SHL R W
Sbjct: 280 FVDPVTGVN-TQEIES--TWARVKRMVKSKKGIPTADLQSHLDEVMWRQW 326
>SB_38822| Best HMM Match : PkinA_anch (HMM E-Value=0.99)
Length = 130
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 49 FVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRETIRXW 198
FV + G T E+E+ T VK +++K+GIP SHL R W
Sbjct: 61 FVDPVTGVN-TQEIES--TWARVKRMVKSKKGIPTADLQSHLDEVMWRQW 107
>SB_29325| Best HMM Match : PkinA_anch (HMM E-Value=0.99)
Length = 302
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 49 FVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRETIRXW 198
FV + G T E+E+ T VK +++K+GIP SHL R W
Sbjct: 233 FVDPVTGVN-TQEIES--TWARVKRMVKSKKGIPTADLQSHLDEVMWRQW 279
>SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)
Length = 503
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 308 NCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 409
N + ++CR C R +P KC +T N RP
Sbjct: 347 NADYVLCRYCQRRFNPTVAERHIPKCANTTN-RP 379
>SB_15406| Best HMM Match : PkinA_anch (HMM E-Value=0.99)
Length = 80
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 49 FVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRETIRXW 198
FV + G T E+E+ T VK +++K+GIP SHL R W
Sbjct: 11 FVDPVTGVN-TQEIES--TWARVKRMVKSKKGIPTADLQSHLDEVMWRQW 57
>SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 165 VSSLPGNN*KXAALFQTITSRKNPHFTWF 251
+ ++ N K AA+ I+S NP FTWF
Sbjct: 8 IGAIASNAEKVAAVAGAISSLDNPGFTWF 36
>SB_48924| Best HMM Match : 7tm_2 (HMM E-Value=1.5e-16)
Length = 736
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 91 EASDTLENVKAKIQAKEGIPPVPTTSHLCRETIRXWPHSFRL 216
E + TLE +++ + +P TS C T+R PH + L
Sbjct: 365 ERTLTLEGNISRVNISRLVSCLPNTSISCNVTVRLAPHEYTL 406
>SB_6577| Best HMM Match : E_raikovi_mat (HMM E-Value=4.4)
Length = 165
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/61 (22%), Positives = 18/61 (29%)
Frame = +2
Query: 311 CEKMICRKCYARLHPRATNCRKTKCGHTNNLRPXXXXXXXXXXXWEIYCNNTILVTCKRN 490
C + KC L + TKC HT CN+T+ C
Sbjct: 42 CNHTLTTKCNHTLTTMCNHTLTTKCNHTLTTMCNHTLTTMCNHTLTTMCNHTLTTMCNHT 101
Query: 491 L 493
L
Sbjct: 102 L 102
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,210,896
Number of Sequences: 59808
Number of extensions: 350315
Number of successful extensions: 821
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1288581898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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