Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_F07
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 156 1e-38
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 156 1e-38
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 78 4e-15
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 77 9e-15
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 77 9e-15
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 65 3e-11
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 41 5e-04
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 34 0.060
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 33 0.10
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 33 0.10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 33 0.10
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 30 0.97
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.7
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 29 2.2
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 28 3.9
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 156 bits (378), Expect = 1e-38
Identities = 73/96 (76%), Positives = 80/96 (83%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILA 298
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG IEPSLR LA
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLA 86
Query: 299 MKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLR 406
KYNC+K ICRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 87 QKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELR 122
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 156 bits (378), Expect = 1e-38
Identities = 73/96 (76%), Positives = 80/96 (83%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILA 298
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG IEPSLR LA
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLA 86
Query: 299 MKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLR 406
KYNC+K ICRKCYARL PRA+NCRK KCGH++ LR
Sbjct: 87 QKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELR 122
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 78.2 bits (184), Expect = 4e-15
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGGTI 274
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG I
Sbjct: 787 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGDI 838
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 559 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 635 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 711 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 114
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 190
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 266
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 342
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 374 VLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPP 418
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 494
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 526 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 570
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 602 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 646
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 678 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 722
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 754 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 798
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 114
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 190
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 266
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 342
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 374 VLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPP 418
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 494
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 103 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 255 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 331 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 407 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 483 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 559 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 635 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/50 (76%), Positives = 41/50 (82%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
K K + ++ QQRLIFAGKQLE GRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 711 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 77.0 bits (181), Expect = 9e-15
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2
Query: 119 KLKSKPRKVFLQSQQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGGTI 274
K K + ++ QQRLIFAGKQLE GRTLSDYNIQK+STLHLVLRLRGG I
Sbjct: 787 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGGDI 838
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 114
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 190
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 266
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 342
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 374 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 418
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 450 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 494
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 526 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 570
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 602 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 646
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 678 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 722
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +1
Query: 19 VFHRRNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
V R MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 754 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 798
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIPP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 38
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIP 150
MQIFVKTL G ITLEVEASDT+ENVKAKIQ KEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +2
Query: 158 QQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
QQRLIFAGKQ+ +T +DY + S LHLVL LRGG
Sbjct: 40 QQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
M I VKTL G I L++E +D +E +K K++ KEGIPP
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPP 38
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 31 RNTMQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPP 153
+ + + VKTL G I + ++ +DT+E +K K+Q K G+PP
Sbjct: 158 KEKLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPP 198
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = +2
Query: 158 QQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLR 262
QQRLIF QLE R L YNI+ E +HLV R R
Sbjct: 200 QQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 67 GXPITLEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRE 183
G PIT VEASD ++++ K+ + P P+ LC++
Sbjct: 100 GDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLCKD 136
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 167 LIFAGKQLEXGRTLSDYNIQKESTLHLVLR 256
L F+GK+LE ++ DYNIQK ST+ + R
Sbjct: 195 LSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 46 IFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIP 150
+FVKTL + LEV A++ + ++K KI+A EGIP
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIP 35
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 158 QQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
+QRL +AG+QLE SD I E+T+++ L L GG
Sbjct: 38 EQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 46 IFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIP 150
+FVKTL + LEV A++ + ++K KI+A EGIP
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIP 35
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 46 IFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIP 150
+FVKTL + LEV A++ + ++K KI+A EGIP
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIP 35
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 158 QQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLRLRGG 268
+QRL +AG+QLE SD I E+T+++ L L GG
Sbjct: 38 EQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 30.3 bits (65), Expect = 0.97
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 40 MQIFVKTLXGXPITLEVEASDTLENVKAKIQAKEGIPPVPTTSHLCRE 183
++I+V+ G TL+ ASDT+ +VKAKI K I +P T L E
Sbjct: 103 IRIYVENA-GRTCTLDTSASDTMASVKAKIWEKLRI--LPNTQKLLLE 147
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 326 CRKCYARLHPRATNCRKTKCGHT 394
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 155 SQQRLIFAGKQLEXGRTLSDYNIQKESTLHL 247
S R++ K LE TL+ YNIQ+ STL L
Sbjct: 211 SSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 92 KLPTLSKMSKLKSKPRKVFLQSQQRLIFAGK-QLEXGRTLSDY 217
KL LS +KL +P K + ++ +F+GK + E RT DY
Sbjct: 94 KLCQLSSSTKLSKEPEKAPVFPEKLKVFSGKTKTEAKRTQQDY 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,042,683
Number of Sequences: 27780
Number of extensions: 258117
Number of successful extensions: 688
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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