Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_F06
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         29   0.11 
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   4.1  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   4.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.1  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   4.1  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   7.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.2  
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    23   7.2  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = -1

Query: 677 QSVARRCNLRRPYVPS----RSETSPVGKHHCLQHEPHFHWGMETAGSQKV 537
           ++VA + N+ R YV        +      HH  QH  H H  + TAGS +V
Sbjct: 623 RAVATKYNISRKYVEKWLQQEEQQQEDDHHHHQQHHHHHHAEVTTAGSVRV 673


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 26  GILAVDVILVVIFHYDGFQTWRPPSV 103
           G   V  +   I HY G   W PP++
Sbjct: 130 GEYVVTTLTKAILHYTGKVIWTPPAI 155


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 26  GILAVDVILVVIFHYDGFQTWRPPSV 103
           G   V ++   I H+ G   W+PP++
Sbjct: 118 GNYEVTIMTKAILHHTGKVVWKPPAI 143


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 620 TSPVGKHHCLQHEPHFH 570
           +SP G HH     PH H
Sbjct: 706 SSPTGGHHLASPSPHHH 722


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 195 TEKCGCPLWEW*VEVLELYFLHLSSL-CRHQALKLTHLTTLGITVAGSAPWTTLV 356
           T +C    WEW    L++   HL  L   +  +   H +T    +A   P T L+
Sbjct: 519 TPECNYTFWEWLYAALKIIRDHLQVLWVNNTIIGFIHKSTAEKYLAKCVPGTFLL 573


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +3

Query: 135 WSSLASGLSAVHQHSRMDKKTEKCGCPLWEW*VEVLELYF 254
           + S  SG    H       ++ K GC +W W    +++Y+
Sbjct: 172 YPSSYSGKPIGHFTQIASDRSTKVGCSMWYWKDGQMDVYY 211


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
 Frame = -1

Query: 635  PSRSETSPVGKH--HCLQHEPHFHWGME 558
            PSRSE +    H  H L H  H H G E
Sbjct: 1302 PSRSEDTLNSSHLHHHLHHGHHHHHGGE 1329


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +1

Query: 61  LSLRRFSNMAATVGRICGARLLKKYGLVWPQACQLSTNTQGW 186
           ++L RF      +   CGA L+ K  ++    C  +  ++GW
Sbjct: 115 MALLRFQARNRKIHGNCGASLVSKRFVLSAAHCFTAAKSKGW 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,659
Number of Sequences: 2352
Number of extensions: 15460
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)