Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_F03
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.2  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   2.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.4  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/18 (38%), Positives = 16/18 (88%)
 Frame = +1

Query: 127 NSTIWYVFNSIVNLRRYF 180
           N+TI+ +F+S++ ++R+F
Sbjct: 158 NTTIFLIFHSVLPIKRFF 175


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/82 (19%), Positives = 34/82 (41%)
 Frame = +3

Query: 411 ISDAYENHKKTEENEILSKGQEVSGNIFYMKQNISNACGTIALVHSVANNTDIIELSDGH 590
           +SD   ++K   E     +   ++ ++  +K  I +A       HS     DI+E++  H
Sbjct: 31  VSDNRRSNKPIMEKR---RRARINNSLNELKTLILDAMKKDPARHSKLEKADILEMTVKH 87

Query: 591 MQKFLNEAKGLDATARGKLLEK 656
           +Q    +   + A     ++ K
Sbjct: 88  LQNLQRQQAAMSAATDPSVVSK 109


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 316 GTPSFCKNLFRTSGLD 269
           G P+F + +F+ SGLD
Sbjct: 507 GHPNFFRIVFQNSGLD 522


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 459 LSKGQEVSGNIFYMKQNISNACGTIALVHSV 551
           L KG+++  N++Y+   + N    + L ++V
Sbjct: 89  LLKGRKIRKNLYYLLLFVINVLYVLTLCYAV 119


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 14  RFFEIANSFLLEVC 55
           +FF I N+ LL +C
Sbjct: 411 KFFSIDNALLLSIC 424


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,157
Number of Sequences: 336
Number of extensions: 3955
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)