Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_F01
(777 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 28 1.7
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 28 1.7
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 2.3
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 27 2.3
SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomy... 27 2.3
SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 4.0
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 26 5.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 5.2
SPBC30D10.14 |||dienelactone hydrolase family|Schizosaccharomyce... 26 6.9
SPBC1685.03 |sec11||signal peptidase subunit Sec11 |Schizosaccha... 25 9.2
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 25 9.2
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 25 9.2
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +3
Query: 273 YEIHPETDDGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEYVGPDSQTVENTIKFVAED 452
Y ++P D + + + + S+D ++ E D+ ++ D Q VEN +K +++D
Sbjct: 577 YLLYPSYDLPDRNLSEHSYSSSSDDEQRISELNDRELDEIDWQAAD-QDVENALKDLSDD 635
Query: 453 SDLETKTI 476
+D +T +I
Sbjct: 636 NDFDTGSI 643
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Frame = +3
Query: 123 HFEAVRMSISAGN--VQDYSVWKTNHSSRVDYN-------KGAVKSIIDENEKHKYGVSY 275
+++ +R +I+ + D W T+ S +DY+ KG V + E V+Y
Sbjct: 384 YYQTIRTAIALRKQAISDSDSWTTDSHSYLDYDLRHAVVRKGDVLGVYTNYESSSDNVTY 443
Query: 276 EIHPETDDG 302
++ DDG
Sbjct: 444 DVSSNFDDG 452
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 162 VQDYSVWKTNHSSRVDYNKGA-VKSIIDENEKHKYGVSYEIHPETDD 299
VQD + + +S V+YN+ A +S +E E+ Y + E+ E +D
Sbjct: 143 VQDEIRFSSRNSKGVNYNEDAYFESFEEEEEEEMYEYATEVSEEPED 189
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 606 TGFDKSAFDVSQYDCDDENVEEHTLQSETVTKFLMFMDPENDKHVNHVFNS 758
TGF+ +++ + DD NV++ E+V MFMD N +N V S
Sbjct: 1011 TGFELTSYVNALSKKDDINVQKTENVDESVGLNAMFMDNVNQDSLNSVDQS 1061
>SPAC16C9.01c ||SPAC4G8.14c|carbohydrate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 472 VLVSKSLSSATNLMVFSTVCESGPTYSNLSVSGKITFKSNILSSDPSN 329
++ +K++ TN F +VCE Y NL KI ++ S P N
Sbjct: 125 LIYAKTIHIITNPKTFVSVCEELAKYGNLKNRPKIVWEPTPESCLPEN 172
>SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/77 (24%), Positives = 30/77 (38%)
Frame = +1
Query: 94 RTSSXGLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTESH 273
+ SS G + SKP + A + YG Q +S KN N E++
Sbjct: 148 KQSSTGTQEESSKPEKSNKLLAKSTLSLYGNQAFNPSSVLPSNSSSTPKENKKNVNKETY 207
Query: 274 MRSTQKLTMVKIQFSSV 324
+T + + +K SV
Sbjct: 208 QPNTFRRSPLKNDTGSV 224
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.6 bits (56), Expect = 4.0
Identities = 34/114 (29%), Positives = 48/114 (42%)
Frame = -3
Query: 697 VTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL*FLTSYLTGC 518
VT+S +ST S S TS + +++P SQIS S SP+S+ F S
Sbjct: 121 VTLSCGQAFTSTVDISSS---TSSSVINSPTGTAVSSQISTLSMSPSSTPVFSPS----- 172
Query: 517 QLLFFSS*VAQIVFIVLVSKSLSSATNLMVFSTVCESGPTYSNLSVSGKITFKS 356
SS VA V V S SS++ V T + P S+ ++ S
Sbjct: 173 --ASVSSKVASSVSYVSSEPSDSSSSTNTVILTTSVNSPAVSSSETLTSVSITS 224
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 26.2 bits (55), Expect = 5.2
Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Frame = +3
Query: 123 HFEAVRMSISAGNVQDYSVWKTNHSSRVDYNKGAVKSIIDENEKHKYGVSYEIHPETDDG 302
H + + ++ + ++ + + N ++S ENE H++ Y E +
Sbjct: 587 HSRPIAIRVATASQRELEQTEKRKAKNGAANASNMESRSSENETHRFKKFYGKERELSNN 646
Query: 303 EDPIFKC-NVLLGSEDNMFDLKVILPETDKFEYVG-PDSQTVENTIKFVAEDSDLETKTI 476
E P + V + N+ D++ + + + E P S+++ + F + E T
Sbjct: 647 EFPSRQTKTVTSANSSNIRDMEHTISDKPRSEPDAIPSSKSMHSNKPF---EEKSEKPTT 703
Query: 477 KTIWATYDEKNNNWH 521
K + N +WH
Sbjct: 704 KRLVTNPSNVNASWH 718
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 357 DLKVILPETDKFEYVGPDSQTVENTIKFVAEDSDLET 467
DL I P T Y+ QTV NT D D++T
Sbjct: 954 DLTTIDPTTFTSTYLSSGFQTVSNTTATSGSDDDVKT 990
>SPBC30D10.14 |||dienelactone hydrolase family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 TFSSSQSYWLTSKADLSNP 608
TFS W+ ++ADLSNP
Sbjct: 210 TFSDMFHGWMAARADLSNP 228
>SPBC1685.03 |sec11||signal peptidase subunit Sec11
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 189
Score = 25.4 bits (53), Expect = 9.2
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -3
Query: 517 QLLFFSS*VAQIVFIVLVSKSLSSATNLMVFSTVCESGPTYSNLSVSGKITF-KSNILSS 341
Q L F +AQI+ ++LV S + F T CES P LS S + +F + ++L
Sbjct: 2 QKLSFRQGLAQILNLLLVLSSAYMGYKTLSFVTDCES-PVVVVLSESMEPSFQRGDLLFL 60
Query: 340 DPSN 329
D N
Sbjct: 61 DNRN 64
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 25.4 bits (53), Expect = 9.2
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 297 DGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEY-VGPDSQTVENTIKFVAEDSDLETKT 473
D E+ I + + + N+ + KVI + + Y +GP+ ++NTIK +D +T+T
Sbjct: 937 DVENAIKEISAIAEEVKNLVE-KVIKIDREYHRYLIGPNGSKLQNTIKECGGSTD-KTET 994
Query: 474 IKTI 485
+ I
Sbjct: 995 ARLI 998
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 421 TVCESGPTYSNLSVSGKITFKS-NILSSDPSNTLHL 317
T+ G Y N+ S + T N+L+SDP NT+++
Sbjct: 690 TISTWGSQYHNVMTSLQRTINLLNMLTSDPKNTVYV 725
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,137,542
Number of Sequences: 5004
Number of extensions: 65502
Number of successful extensions: 235
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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