Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_F01
(777 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40) 44 1e-04
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_45121| Best HMM Match : rve (HMM E-Value=3.8e-09) 31 0.79
SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043) 31 1.4
SB_17727| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12) 31 1.4
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 30 2.4
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_51546| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_29114| Best HMM Match : rve (HMM E-Value=1.9e-23) 29 3.2
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 29 3.2
SB_59677| Best HMM Match : RVT_1 (HMM E-Value=2.1e-28) 29 4.2
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 29 4.2
SB_37239| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19) 29 5.5
SB_45481| Best HMM Match : rve (HMM E-Value=3.1e-17) 29 5.5
SB_10389| Best HMM Match : rve (HMM E-Value=1.8e-15) 29 5.5
SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16) 28 7.3
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_51458| Best HMM Match : CAMP_factor (HMM E-Value=7.4) 28 9.7
SB_51309| Best HMM Match : LicD (HMM E-Value=0.0069) 28 9.7
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27) 28 9.7
SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 50.8 bits (116), Expect = 1e-06
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Frame = +3
Query: 108 WPGTYHFEAVRMSISAGNVQD-YSVW-KTNHS-SRVDYNKGAVKSIIDENEKHKYGVSYE 278
+P YH ++ + +++ + VW H+ SR+DY G ++ + +G +++
Sbjct: 48 FPRNYHATG-KLQLPHSKIEEPFEVWFSAQHNRSRIDYYYGTDRTF-QRADVGPHGEAFK 105
Query: 279 IHPETDDGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEYVGPDSQTVENTIKFVAEDSD 458
I P D + C L G+E ++ I+P F++ G + +T K+
Sbjct: 106 IVPIYTDEKGGYIGCWHLEGTERTPIVVQPIVPNMTDFKFAGYEVYHGASTAKWEYRYLA 165
Query: 459 LETKTIKTIWATYDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNF 602
TIW T + PVRYE+K Y+ LL + + +Y +F
Sbjct: 166 FGLMNAHTIWVTTADPPR---PVRYEMKGYDNLLASYYDNYVLEYISF 210
>SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40)
Length = 1198
Score = 44.0 bits (99), Expect = 1e-04
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 7/170 (4%)
Frame = +3
Query: 114 GTYH--FEAVRMSISAGNVQDYSVWKTNHSSRVDYNKGAVKSIIDENEKHKYGVSYEIHP 287
GT H ++ +R + +DY++ SR+DY G K+ + YGV ++ P
Sbjct: 1024 GTLHLPYDNIREPFESWYARDYNM------SRIDYYYGMDKTF-QRGDLMDYGVLVKVVP 1076
Query: 288 ----ETDDGEDPIFKCNVLLGSEDNMFDLKVILP-ETDKFEYVGPDSQTVENTIKFVAED 452
+D + C G + + +LP + F+++G + ++ T K+
Sbjct: 1077 AHWGRDEDLDKNTISCWYRPGFRWSQQRGQSVLPAHLEHFKFIGEEIRSGMPTFKYQRNT 1136
Query: 453 SDLETKTIKTIWATYDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNF 602
+ K T W T K P+RY + Y+ LL H + DY +F
Sbjct: 1137 TIFHKKNSYTFWMT---KAKPHRPLRYVMHGYDTLLNSFYDHYVMDYLSF 1183
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 40.3 bits (90), Expect = 0.002
Identities = 35/169 (20%), Positives = 71/169 (42%), Gaps = 3/169 (1%)
Frame = +3
Query: 108 WPGTYHFEAVRMSISAGNVQDYSVWKTN--HSSRVDYNKGAVKSIIDENEKHKYGVSYEI 281
WP Y V A + + W SR+DY G + S + G ++ I
Sbjct: 341 WPQEYTLTGVLRLPYAEIEEPFQAWFDGGRKRSRIDYY-GGMDSTFQRGDILTAGANFRI 399
Query: 282 HPETDDGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEYVGPDSQTVENTIKFVAEDSDL 461
P + + + + C G+ + + +LP+ KF +VG + +K + L
Sbjct: 400 CPMSTETKLNVRSCFQTNGTSASPVGPQSVLPDLAKFSFVG---NSTYGDVKCSIWEYKL 456
Query: 462 ETKTIKTIWATYDEKNNNWHPVRYEVKNYNELLGL-LEKHEIWDYFNFN 605
+ + Y ++ P+ YE+ +++L+G +++E+ DY N++
Sbjct: 457 TVGHKRNKYTMYTSMHDPPAPIHYEMLGFDDLIGSHYDQYEL-DYSNYS 504
>SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 35.1 bits (77), Expect = 0.064
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 486 WATYDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNFNT-GFDKSAFDV 635
+ Y + + PVRYE+ Y+ LL H I DY NF+ + S F++
Sbjct: 28 YTLYTTPSRPYTPVRYEMMGYDTLLSSYYDHYILDYHNFSAWKYQYSVFEI 78
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 31.9 bits (69), Expect = 0.60
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 495 YDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNFNT-GFDKSAFDVSQYDCD-DENVE 668
Y K + P+R E+ Y+ +L + DY FN +DK FD+ D D DE +
Sbjct: 432 YATKTDPPLPMRLEMDGYDTVLVSYYDSYVIDYHTFNKWTYDKGIFDIPHLDDDFDEFRQ 491
Query: 669 EH 674
+H
Sbjct: 492 QH 493
>SB_45121| Best HMM Match : rve (HMM E-Value=3.8e-09)
Length = 1111
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 97 TSSXGLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTES 270
T+S G+EH+IS P Q + K +++ A+ + K+P L +NT +E+
Sbjct: 826 TNSYGIEHVISSPGYAQSNGKVENAIKTAKNLMKKATESNKDPYLAL-LDWRNTPSET 882
>SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043)
Length = 811
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Frame = +3
Query: 498 DEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNFNTGFDK-SAFDVSQ-----YDCDDE 659
DE ++H YEV NY+ ++ L + + D NF+T K F V++ D +E
Sbjct: 188 DEMELDFHEDHYEVMNYDLIINLPGQESVLDVTNFDTFLAKVMDFGVAEGRFIKEDDYNE 247
Query: 660 NVEEHTLQS-ETVTKFLMFMD 719
N +E + S ETV + +D
Sbjct: 248 NTDESFVVSPETVLRNCNLVD 268
>SB_17727| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12)
Length = 648
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 546 YNELLGLLEKHEIWDYFNFNTGFDKS 623
YN+L+ LEKH+I Y NFN F K+
Sbjct: 618 YNQLIFFLEKHKI--YLNFNLDFGKA 641
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 495 YDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNFNT-GFDKSAFDV 635
Y+ K + P+R E+ YN +L + DY FN +DK FD+
Sbjct: 1110 YNTKTDPPLPMRLEMDGYNTVLVSYYDSYVIDYHTFNKWTYDKGIFDI 1157
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 97 TSSXGLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTES 270
T+S G+EH+ S P Q + K +++ A+ + K+P L +NT +E+
Sbjct: 3072 TNSYGIEHVTSSPGYAQSNGKVENAIKTAKNLMKKATESNKDPYLAL-LDWRNTPSET 3128
>SB_51546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 97 TSSXGLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTES 270
T+S G+EH+ S P Q + K +++ A+ + K+P L +NT +E+
Sbjct: 63 TNSYGIEHVTSSPGYAQSNGKVENAIKTAKNLMKKATESNKDPYLAL-LDWRNTPSET 119
>SB_29114| Best HMM Match : rve (HMM E-Value=1.9e-23)
Length = 365
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 97 TSSXGLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTES 270
T+S G+EH+ S P Q + K +++ A+ + K+P L +NT +E+
Sbjct: 222 TNSYGIEHVTSSPGYAQSNGKVENAIKTAKNLMKKATESNKDPYLAL-LDWRNTPSET 278
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 29.5 bits (63), Expect = 3.2
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Frame = -3
Query: 724 SGSMNMRNLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL* 545
+ S ++ + +T+S T SSS S +LTS + LS V S +S F S +S
Sbjct: 539 TSSSSLSDFLTLSSLLSDFLTSSSSLSVFLTSSSSLS--VFLTSSSSLSDFLTSSSSLSV 596
Query: 544 FLTSYLTGCQLLFFSS*VAQIVFIVLVSKSLSSATNLMVFSTVCESGPTY--SNLSVSGK 371
FLTS L SS L S L+S+++L VF T + S+ S+S
Sbjct: 597 FLTSSSLPSDFLTSSS---------LPSDFLTSSSSLSVFPTSSSLPSDFLTSSSSLSDF 647
Query: 370 ITFKSNILSSDPSNTL 323
+T S++ S++L
Sbjct: 648 LTSSSSLSVFPTSSSL 663
>SB_59677| Best HMM Match : RVT_1 (HMM E-Value=2.1e-28)
Length = 1159
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 97 TSSXGLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTES 270
T+S G+EH+ S P Q + K +++ A+ + K+P L +NT +E+
Sbjct: 918 TNSYGIEHVTSSPGYVQSNGKVENAIKTAKNLMKKATESNKDPYLAL-LDWRNTPSET 974
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -3
Query: 703 NLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL 548
++V++S+ S+++ S W+T+ ++P+ LK + ++P SSL
Sbjct: 748 SMVSLSVATTPCSSWTRSVFSWMTASISATDPIASLKPFSFATSCRTPPSSL 799
>SB_33000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 97 TSSXGLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTES 270
T+S G+EH+ S P Q + K +++ A+ + K+P L +NT +E+
Sbjct: 594 TNSCGIEHVTSSPGYAQSNGKVENAIKTAKNLMKKATESNKDPYLAL-LDWRNTPSET 650
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -3
Query: 703 NLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL 548
++V++S+ S+++ S W+T+ ++P+ LK + ++P SSL
Sbjct: 654 SMVSLSVATTPCSSWTRSVFSWMTASISATDPIASLKPLSFATSCRTPPSSL 705
>SB_37239| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19)
Length = 690
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +1
Query: 109 GLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTESHMRSTQ 288
G +HI S P Q A K + K+I++ A K+P + L K +NT E S
Sbjct: 608 GFQHITSSPEYPQSNGAAEKAVQTAKRILKKADADGKDPFEGL-LKYRNTPFEDIGVSPV 666
Query: 289 KLTMVKIQFSS 321
+L M + +S
Sbjct: 667 QLLMSRRNHAS 677
>SB_45481| Best HMM Match : rve (HMM E-Value=3.1e-17)
Length = 414
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 73 SDNXLEXRTSSX-GLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKT 249
SDN + S G +HI S P Q A + + K+I + A+ K+P + L K
Sbjct: 173 SDNGPQYTVSEAWGFQHITSSPEYPQSNGAAERAVQTAKRIFKKAAAENKDPFEGL-LKY 231
Query: 250 KNT 258
+NT
Sbjct: 232 RNT 234
>SB_10389| Best HMM Match : rve (HMM E-Value=1.8e-15)
Length = 256
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +1
Query: 109 GLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTESHMRSTQ 288
G +HI S P Q A K + K+I++ A K+P + L K +NT E S
Sbjct: 174 GFQHITSSPEYPQSNGAAEKAVQTAKRILKKADADGKDPFEGL-LKYRNTPFEDIGVSPV 232
Query: 289 KLTMVKIQFSS 321
+L M + +S
Sbjct: 233 QLLMSRRNHAS 243
>SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1419
Score = 28.3 bits (60), Expect = 7.3
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +3
Query: 276 EIHPETDDGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEYVGPDSQT-VENTIKFVAED 452
E+H DD D + V+LG D+MF L D+F + +T + ++++ + D
Sbjct: 1299 ELHIWLDDVSDMMKAEKVVLGDSDDMFALAEKQKSPDQFVALDATIRTLLLSSMRLIRVD 1358
Query: 453 SDLETKTIKTIWATYDEKNNNWH-PVRYEVKNYNELLGLLEKHEIW 587
+K W +K+ W + Y ++ + + L E+ W
Sbjct: 1359 K------LKKHWEKVQDKSTVWRGQIDYLMEEWKRYVELREELVEW 1398
>SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16)
Length = 656
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 109 GLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTESHMRSTQ 288
G +HI S P Q A K + K+I++ A K+P + L K +NT E S
Sbjct: 520 GFQHITSSPEYPQSNGAAEKAVQTAKRILKKADADGKDPFEGL-LKYRNTPFEDIGVSPV 578
Query: 289 KLTM 300
+L M
Sbjct: 579 QLLM 582
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -3
Query: 703 NLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL 548
++V++S+ S++ S W+T+ ++P+ LK + + ++P SSL
Sbjct: 852 SMVSLSVATTPYSSWIHSVFSWMTASTSATDPIASLKPLRFATSCRTPPSSL 903
>SB_51458| Best HMM Match : CAMP_factor (HMM E-Value=7.4)
Length = 351
Score = 27.9 bits (59), Expect = 9.7
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +3
Query: 396 YVGPDSQTVENTIKFVAEDS-DLETKTIKTIWATYDEKNNNWHPVRYEVKNYNELLGLLE 572
+VG + TV N +A S + +K KT A D HP + + GL +
Sbjct: 32 FVGGNGPTVINPDPIIATSSKETTSKVNKTRKAPKDRTLLLGHPSSTRKRKLGDDTGLYD 91
Query: 573 KHEIWDYFNFNTGFDKSAFDVSQYDCDDENVEEHTLQSETVTKF 704
+ F + + D +Q + DD+N+E ET T +
Sbjct: 92 NN-----FESQDEDESCSRDDTQLEIDDQNLEPFQKDQETQTVY 130
>SB_51309| Best HMM Match : LicD (HMM E-Value=0.0069)
Length = 466
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 154 PATYKTTRYGKQIIRHAST 210
PA Y +RYGK+I++H+ +
Sbjct: 404 PAMYARSRYGKEILKHSQS 422
>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1427
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 114 GTYHFEAVRMSISAGNVQDYS--VWKTNHSSRVDYNKGAVKSIIDENEKHKYG 266
G +FE S S G++ Y V++ H + K A+ +DE E+H YG
Sbjct: 711 GFDNFEIKPRSASFGSLAGYENHVFRKGHQDQACV-KSAISKALDEFERHVYG 762
>SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27)
Length = 334
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 709 MRNLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVL 602
M +LV + CS+ F+ + +YW ++ D +P+L
Sbjct: 236 MNSLVVYFVFVACSTPFACALAYWEVTQNDYLSPIL 271
>SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 109 GLEHIISKPSGCQLVPATYKTTRYGKQIIRHASTTTKEP*KVLSTKTKNTNTE 267
G +HI S P Q A K + K+I++ A K+P + L K +NT E
Sbjct: 562 GFQHITSSPEYPQSNGAAEKAVQTAKRILKKAGADGKDPFEGL-LKYRNTPFE 613
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,568,093
Number of Sequences: 59808
Number of extensions: 453116
Number of successful extensions: 1257
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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