Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_F01
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40797-9|AAK95870.1| 349|Caenorhabditis elegans Hypothetical pr... 34 0.099
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 34 0.13
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 34 0.13
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 3.7
U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical pr... 28 6.5
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 28 6.5
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 28 6.5
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 6.5
AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine re... 28 6.5
AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine re... 28 6.5
Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical pr... 28 8.6
>U40797-9|AAK95870.1| 349|Caenorhabditis elegans Hypothetical
protein C28C12.12 protein.
Length = 349
Score = 34.3 bits (75), Expect = 0.099
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 YSVWKTNHSSRVDYNKGAVKSIIDENEKHKYGVSY-EIHPET-DDGEDPIFKCNVLLGSE 344
Y + RV+Y + K ++D KH V Y ++ ++ +D P+ C+
Sbjct: 147 YELMPNEERDRVEYQRKKTKKLVDGLLKHTAKVFYVDVEKKSKEDPSPPLVTCSTFAQLL 206
Query: 345 DNMFDLKVILPETDKFEY----VGPDSQTVENTIKFV 443
+ M +L P+ D++++ DS+ E IKF+
Sbjct: 207 EIMAELVQEDPQNDEYDHRKHIANIDSEEFEKKIKFM 243
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 33.9 bits (74), Expect = 0.13
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Frame = +3
Query: 297 DGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEY---VGPDSQTVENTIKFVAEDSDLET 467
DG+ I + L S DN+ +++ +T+ F + VG D + + V E +
Sbjct: 885 DGDSSIIHSHTALLSSDNILKAQIVANKTNIFIFPREVGKDYIVIRRKLN-VFEHHASDY 943
Query: 468 KTIKTIWATYDEKNNNWH--PVRYEVKNYNELLGLLEKHEIWDYFNFNTGFDKSAFDVSQ 641
K T WAT + + W+ E+K Y ++ EK + D F+ T + F V
Sbjct: 944 KCWYTSWATDPKYDMLWYYNSAEMEIKGY-DIFKKSEK-SVGDAFDSLTFLAGAEFAVQV 1001
Query: 642 YD 647
YD
Sbjct: 1002 YD 1003
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 33.9 bits (74), Expect = 0.13
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Frame = +3
Query: 297 DGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEY---VGPDSQTVENTIKFVAEDSDLET 467
DG+ I + L S DN+ +++ +T+ F + VG D + + V E +
Sbjct: 885 DGDSSIIHSHTALLSSDNILKAQIVANKTNIFIFPREVGKDYIVIRRKLN-VFEHHASDY 943
Query: 468 KTIKTIWATYDEKNNNWH--PVRYEVKNYNELLGLLEKHEIWDYFNFNTGFDKSAFDVSQ 641
K T WAT + + W+ E+K Y ++ EK + D F+ T + F V
Sbjct: 944 KCWYTSWATDPKYDMLWYYNSAEMEIKGY-DIFKKSEK-SVGDAFDSLTFLAGAEFAVQV 1001
Query: 642 YD 647
YD
Sbjct: 1002 YD 1003
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 187 QIIRHASTTTKEP*KVLSTKTKNTNTESHMRSTQKLT 297
++IR +TTTK+P STK T T + + +QK T
Sbjct: 371 EVIRQVTTTTKKPSTTTSTKKLTTTTTTTPKPSQKPT 407
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 288 ETDDGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEYVGPDSQTVENTIKFVAEDS 455
+ D GE+ I +++ G+E+++F + E + + P+ Q VE+ ++ A DS
Sbjct: 1508 DKDRGENGIVTYSIVSGNEESLFKIDAKSGEVRLAKPLDPELQHVESILRIRAIDS 1563
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 288 ETDDGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEYVGPDSQTVENTIKFVAEDS 455
+ D GE+ I +++ G+E+++F + E + + P+ Q VE+ ++ A DS
Sbjct: 1508 DKDRGENGIVTYSIVSGNEESLFKIDAKSGEVRLAKPLDPELQHVESILRIRAIDS 1563
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 288 ETDDGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEYVGPDSQTVENTIKFVAEDS 455
+ D GE+ I +++ G+E+++F + E + + P+ Q VE+ ++ A DS
Sbjct: 1508 DKDRGENGIVTYSIVSGNEESLFKIDAKSGEVRLAKPLDPELQHVESILRIRAIDS 1563
>U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical
protein C06A5.6 protein.
Length = 691
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 219 GAVKSIIDENEKHKYGVSYEIHPETDDGEDPIFKCNVLLGSEDNM 353
G + + K K GV I+ + D G+ IF C +LG+ M
Sbjct: 232 GQINEFYKDKVKRKSGVHALIYKKDDRGDKLIFDCPSILGTSMTM 276
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 501 EKNNNWHPVRYEVKNYNELL-GLLEKHEIWDYFNFNTGFDK 620
E N W P RY V YN ++ L K E+W FDK
Sbjct: 384 ESNGKWVPRRYLVDIYNHIMFPLFVKWELWP-STLKWAFDK 423
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 501 EKNNNWHPVRYEVKNYNELL-GLLEKHEIWDYFNFNTGFDK 620
E N W P RY V YN ++ L K E+W FDK
Sbjct: 384 ESNGKWVPRRYLVDIYNHIMFPLFVKWELWP-STLKWAFDK 423
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 28.3 bits (60), Expect = 6.5
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +3
Query: 243 ENEKHKYGVSYEI---HPETDDGEDPIFKCNVLLGSEDNMFDLKVILPETDKFEYVGPDS 413
E + + G ++E+ H + D+ D I + + L SED DL+ + K E V D
Sbjct: 1182 EQREQQLGSAHEVQRFHRDVDETRDWIQEKDDALDSEDFGRDLRSVQALQRKHEGVERDL 1241
Query: 414 QTVENTIKFVAEDSD----LETKTIKTIWATYDEKNNNWHPVRYEVKNYNELL 560
+ + IK + E ++ + + I+ E N W+ + + N E L
Sbjct: 1242 AALGDKIKSLDEKANRLRQSHPEAAEQIYDLQRELNEQWNRLTSKANNRKEKL 1294
>AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform b protein.
Length = 403
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +3
Query: 342 EDNMFDLKVILPETDKFEYVGPDSQTVENTIKFVAEDSDLETKTIKTIWATYDEKNNNWH 521
+D + IL E++ FE ++Q V T + + D L+++T + + +NN +
Sbjct: 318 QDQIVATSKILMESEDFE--NAENQKVYQTYRLMV-DRSLKSETRIFVVNAFGINSNNLN 374
Query: 522 PVRYEVKNYNELLGLLEK 575
+ + N LL +LEK
Sbjct: 375 IAMFVIPNLGPLLMMLEK 392
>AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform a protein.
Length = 403
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +3
Query: 342 EDNMFDLKVILPETDKFEYVGPDSQTVENTIKFVAEDSDLETKTIKTIWATYDEKNNNWH 521
+D + IL E++ FE ++Q V T + + D L+++T + + +NN +
Sbjct: 318 QDQIVATSKILMESEDFE--NAENQKVYQTYRLMV-DRSLKSETRIFVVNAFGINSNNLN 374
Query: 522 PVRYEVKNYNELLGLLEK 575
+ + N LL +LEK
Sbjct: 375 IAMFVIPNLGPLLMMLEK 392
>Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical
protein R74.7 protein.
Length = 337
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 168 DYSVWKTNHSSRVDYNKGAVKSIIDENEKHKYGVSYEIHPETD 296
D S W + S +D + K IDE +K +Y + P TD
Sbjct: 236 DLSGWDSEKSYPLDIDACFPKGEIDEEQKKRYEFKDVVQPPTD 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,123,561
Number of Sequences: 27780
Number of extensions: 357909
Number of successful extensions: 1145
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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