Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E24
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.9  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    22   5.1  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   6.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.0  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 415 SDVPLHDACR 386
           SD+PLHDA R
Sbjct: 331 SDIPLHDATR 340


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 415 SDVPLHDACR 386
           SD+PLHDA R
Sbjct: 411 SDIPLHDATR 420


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 415 SDVPLHDACR 386
           SD+PLHDA R
Sbjct: 331 SDIPLHDATR 340


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 368 TSFLICPTCVVKRNV*KHLI 427
           TS+ + PT  +K N  +H+I
Sbjct: 18  TSYFVTPTMSIKCNCKRHVI 37


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 290 RASLQRHPHSRHLRRQ 337
           +ASL+RH   +H  RQ
Sbjct: 18  KASLKRHVADKHAERQ 33


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 447 QKRNGPLIKC 418
           QKRNG +I+C
Sbjct: 365 QKRNGSMIEC 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,684
Number of Sequences: 438
Number of extensions: 2646
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)