Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E21
         (535 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...    83   5e-15
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...    82   7e-15
UniRef50_UPI0000DA1A5E Cluster: PREDICTED: hypothetical protein;...    32   7.2  
UniRef50_Q9LIR5 Cluster: Genomic DNA, chromosome 3, BAC clone:F1...    32   9.5  

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score = 82.6 bits (195), Expect = 5e-15
 Identities = 39/59 (66%), Positives = 42/59 (71%)
 Frame = +2

Query: 272 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVS 448
           P    EGEGDPEFIKRQDQKRSDLD+QLKEYI EWRKQR+            QAKRKV+
Sbjct: 26  PQTPAEGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVT 84


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score = 82.2 bits (194), Expect = 7e-15
 Identities = 39/60 (65%), Positives = 42/60 (70%)
 Frame = +2

Query: 269 TPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVS 448
           T    +EG GDPEFIKRQDQKRSDLDEQL+EYI EWRKQRA            QAKRK+S
Sbjct: 26  TTTKVEEGAGDPEFIKRQDQKRSDLDEQLREYITEWRKQRAKEEDELKKLKEKQAKRKIS 85


>UniRef50_UPI0000DA1A5E Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 114

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = -3

Query: 236 QSQNIPPRQTCWLFIECRTGRSRSLSHSALVLGPAAQRR 120
           +S+N   RQ CWLF E RTG+ R    ++L L P  QRR
Sbjct: 33  ESRNRKSRQFCWLFPE-RTGQ-RDYIKASLGLWPCLQRR 69


>UniRef50_Q9LIR5 Cluster: Genomic DNA, chromosome 3, BAC
           clone:F14O13; n=2; Arabidopsis thaliana|Rep: Genomic
           DNA, chromosome 3, BAC clone:F14O13 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 224

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 281 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 388
           K +  G    IK +D++   +  QLKE   EWRK+R
Sbjct: 21  KDQSRGRRHLIKERDEREKVMFLQLKEAEREWRKER 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,805,460
Number of Sequences: 1657284
Number of extensions: 5753158
Number of successful extensions: 19847
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19824
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)