Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E20
         (798 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   4.7  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    24   6.3  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    24   6.3  
EF426240-1|ABO26483.1|   64|Anopheles gambiae unknown protein.         23   8.3  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 545 TGRETGQQGPGASQRPREQVAELER 619
           TG+   QQ P   Q+P+++  +L+R
Sbjct: 251 TGKPRSQQQPQQQQQPQQKQQQLQR 275


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 300 EERMPYPVIVAFGILKKAAAKVNIEYGLEKKIADAIMQACDDVISGKL 443
           E R+  P I     + K+  K +  YG  + + D I +A D +I+GK+
Sbjct: 170 EGRLGMPAINVNDSVTKS--KFDNLYGCRESLLDGIKRATDVMIAGKV 215


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 782 RQRHRVHQVGPSNFDDPLKVLALGLQRVPEGHEAR 678
           +Q+H+  Q+GPS    P ++L  G    PEG + +
Sbjct: 106 QQQHQ--QIGPSTSAAPPQLLVSGASFDPEGDDGQ 138


>EF426240-1|ABO26483.1|   64|Anopheles gambiae unknown protein.
          Length = 64

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = -2

Query: 569 LAAQFPAQYLYGAVRNHLVRVHVGLSTGASLPDDEGEVTLAVELPADDV 423
           + AQ    +++  V  HL   +  ++     PD        + +PADDV
Sbjct: 16  VGAQVAGGFMWWWVLRHLFHEYEHITGEFDYPDPSSWTNAELGIPADDV 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,878
Number of Sequences: 2352
Number of extensions: 14820
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)