Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E18
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   7.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.7  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 342  GPASPAVDPRGSSGFPRTDGRPPANAPGGTTGNLTG 235
            GP++ + D   S G   T  +     PGG+ G  TG
Sbjct: 1396 GPSNESTDGGESMGTASTSSQTDEPRPGGSGGGHTG 1431


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -1

Query: 172 SESTEMMFCNQLSF*NPLNACIIFLGF*IIKNPANIYCISYGS 44
           S+S  +++ + L+    ++   +FL   I+ NP    C+ +G+
Sbjct: 4   SDSPHVLWIHFLNITQLISLIFVFLDDAIVANPLKNRCLQFGT 46


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 318 PRGSSGFPRTDGRPPANAPGGTTG 247
           P+G +G P   GRP  +   G  G
Sbjct: 165 PKGPAGHPGAPGRPGVDGVKGLPG 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,125
Number of Sequences: 2352
Number of extensions: 13477
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)