Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_E18
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 36 0.022
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 34 0.090
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.28
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 33 0.28
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 33 0.28
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 31 1.1
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 31 1.1
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 31 1.1
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 31 1.1
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 31 1.1
Z81491-15|CAB04022.2| 216|Caenorhabditis elegans Hypothetical p... 30 1.5
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 30 1.5
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 30 1.5
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 30 1.9
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 30 1.9
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 2.6
U50198-1|AAA91259.2| 529|Caenorhabditis elegans Hypothetical pr... 29 2.6
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 29 2.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 2.6
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 2.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 2.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 2.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 2.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 2.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 2.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 2.6
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 2.6
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 29 3.4
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 29 3.4
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 29 3.4
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 29 3.4
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 29 3.4
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 29 3.4
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 3.4
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 29 4.5
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 4.5
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 4.5
Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 28 5.9
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 28 5.9
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen pro... 28 7.8
>Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical
protein ZK897.1 protein.
Length = 1396
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +2
Query: 509 KDQDPQEKIXKLXEDKKRRLQLYVFVSRCIAHPFNAKQPTDMTRRHTKLTPHQLETIQAR 688
K++ + K + ED K+ LQ+Y+F++RCIA+PFN +Q DM RR K+ +L I+ R
Sbjct: 179 KEEQERMKAEREEEDHKKNLQMYMFLARCIAYPFNGQQTGDMARRQMKVNKQELARIRER 238
Query: 689 FQAFLKGETXILADE 733
F FLKGET I ADE
Sbjct: 239 FTLFLKGETNIAADE 253
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = -2
Query: 384 G*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
G RGA + A G A PA P G GFP DG P + P G G
Sbjct: 226 GQRGAGTPGAPGAPGNAGPA-GPSGQDGFPGQDGAPGSAGPAGQDG 270
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = -2
Query: 384 G*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
G RGA + A G A PA P G GFP DG P + P G G
Sbjct: 210 GQRGAGTPGAPGAPGNAGPA-GPSGQDGFPGQDGAPGSAGPAGQDG 254
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 34.3 bits (75), Expect = 0.090
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = -2
Query: 384 G*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
G RG+ + A G A PA P G GFP DG P P G G
Sbjct: 210 GQRGSGAPGAPGAPGNAGPA-GPAGQDGFPGQDGAPGPAGPAGQDG 254
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Frame = -2
Query: 342 GPASPAVDP-----RGSSGFPRTDGRPPANAPGGTTG 247
GPA P P RG+ GFP G P N GT G
Sbjct: 162 GPAGPDGQPGFPGQRGNDGFPGAPGAPGDNGQPGTPG 198
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 342 GPASPA--VDPRGSSGFPRTDGRPPANAPGGTTGN 244
GPA PA P G+ G P DG+P A P G GN
Sbjct: 219 GPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGN 253
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 339 PASPAVD-PRGSSGFPRTDGRPPANAPGGTTG 247
P +P P G+ G P DG P A GT+G
Sbjct: 242 PGAPGPKGPNGNPGAPGADGNPGAPGQAGTSG 273
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 342 GPASPA--VDPRGSSGFPRTDGRPPANAPGGTTGN 244
GPA PA P G+ G P DG+P A P G GN
Sbjct: 219 GPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGN 253
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 339 PASPAVD-PRGSSGFPRTDGRPPANAPGGTTG 247
P +P P G+ G P DG P A GT+G
Sbjct: 242 PGAPGPKGPNGNPGAPGADGNPGAPGQAGTSG 273
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 342 GPASPA--VDPRGSSGFPRTDGRPPANAPGGTTGN 244
GPA PA P G+ G P DG+P A P G GN
Sbjct: 219 GPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGN 253
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 339 PASPAVD-PRGSSGFPRTDGRPPANAPGGTTG 247
P +P P G+ G P DG P A GT+G
Sbjct: 242 PGAPGPKGPNGNPGAPGADGNPGAPGQAGTSG 273
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 342 GPASPA--VDPRGSSGFPRTDGRPPANAPGGTTGN 244
GPA PA P G+ G P DG+P A P G GN
Sbjct: 219 GPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGN 253
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 339 PASPAVD-PRGSSGFPRTDGRPPANAPGGTTG 247
P +P P G+ G P DG P A GT+G
Sbjct: 242 PGAPGPKGPNGNPGAPGADGNPGAPGQAGTSG 273
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
GPA PA P+G +G P +DG+P A G G
Sbjct: 162 GPAGPA-GPKGPNGNPGSDGQPGAPGNNGNAG 192
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTGN 244
GPA P P G+ G P DG+P A P G GN
Sbjct: 222 GPAGPQGQP-GAPGQPGHDGQPGAPGPKGPNGN 253
>Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical
protein W08E3.1 protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 345 LGPASPAVDPRGSSGFPRTDGRPPANAPGGTTGNLTG 235
+G A P RG P G PP APGG +G + G
Sbjct: 104 VGQAKPG--GRGMPAMPGMPGMPPGGAPGGLSGAMRG 138
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 351 NVLGPASPA--VDPRGSSGFPRTDGRPPANAPGGTTGN 244
N GPA P P G G P DG+P A GT G+
Sbjct: 228 NAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGNDGTPGS 265
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 351 NVLGPASPA--VDPRGSSGFPRTDGRPPANAPGGTTGN 244
N GPA P P G G P DG+P A GT G+
Sbjct: 228 NAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGNDGTPGS 265
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.84
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = -2
Query: 405 VSLCLVAG*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
+SL G G C A G A PA P G+ G P DG+P + P G G
Sbjct: 125 ISLISHEGESGCIKCPA----GEAGPA-GPDGAPGAPGPDGQPGQDGPAGQPG 172
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 339 PASPAVDPR-GSSGFPRTDGRPPANAPGGTTGNLTG 235
P P + R G+ G P TDG P A P G GN G
Sbjct: 368 PGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGG 403
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 339 PASPAVDPR-GSSGFPRTDGRPPANAPGGTTGNLTG 235
P P + R G+ G P TDG P A P G GN G
Sbjct: 367 PGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGG 402
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 339 PASPAVDPR-GSSGFPRTDGRPPANAPGGTTGNLTG 235
P P + R G+ G P TDG P A P G GN G
Sbjct: 367 PGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGG 402
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 339 PASPAVDPR-GSSGFPRTDGRPPANAPGGTTGNLTG 235
P P + R G+ G P TDG P A P G GN G
Sbjct: 368 PGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGG 403
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 339 PASPAVDPR-GSSGFPRTDGRPPANAPGGTTGNLTG 235
P P + R G+ G P TDG P A P G GN G
Sbjct: 404 PGPPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGG 439
>Z81491-15|CAB04022.2| 216|Caenorhabditis elegans Hypothetical
protein D1086.7 protein.
Length = 216
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 563 VFSCPLXTFXSSPVDLGPCQN 501
V+S P TF SP+D+ CQN
Sbjct: 26 VYSAPTSTFNLSPIDIAKCQN 46
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -2
Query: 384 G*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
G RG+ + G A PA P G G P DG+P P G G
Sbjct: 210 GQRGSGAPGGPGAPGNAGPA-GPAGQDGAPGQDGQPGPAGPAGQDG 254
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -2
Query: 384 G*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
G RG+ + G A PA P G G P DG+P P G G
Sbjct: 222 GQRGSGAPGGPGAPGNAGPA-GPAGQDGAPGQDGQPGPAGPAGQDG 266
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defective
protein 45 protein.
Length = 1076
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 318 PRGSSGFPRTDGRPPANAPGGTTGN 244
P G + PR DG PP + G TGN
Sbjct: 1044 PTGRNSLPRRDGPPPRSNNTGNTGN 1068
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = -2
Query: 387 AG*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
AG GAA D G A P P G +G P DG+P A P G G
Sbjct: 182 AGPAGAAGPDGEGA-GYAEPG--PAGPAGPPGPDGQPGAPGPDGQPG 225
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDG-RPPANAPGGTTG 247
G + PRG G P G RPP APGG G
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDG-RPPANAPGGTTG 247
G + PRG G P G RPP APGG G
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>U50198-1|AAA91259.2| 529|Caenorhabditis elegans Hypothetical
protein R04B3.1 protein.
Length = 529
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 281 DPRPTHQEAQLVI*LAVSCVHPHCLLQMSLGRS 183
DPRP+HQ QLV LA+ C +L RS
Sbjct: 146 DPRPSHQNGQLVS-LAIGCQQSTGILSFRFWRS 177
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTGNLTGC 232
GP A D G GFP G N P G TG GC
Sbjct: 260 GPQGSAGD-NGGDGFPGQPGANGDNGPDGETGVSGGC 295
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -2
Query: 342 GPASPA--VDPRGSSGFPRTDGRPPANAPGGTTG 247
GP PA + P+G +G P DG+P A G G
Sbjct: 166 GPPGPAGSIGPKGPNGNPGFDGQPGAPGNNGFAG 199
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDG-RPPANAPGGTTG 247
G + PRG G P G RPP APGG G
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTGNLTGC 232
GPA PA D G G P G P A G G+ GC
Sbjct: 261 GPAGPAGDA-GPDGAPGNAGAPGAPGEAGAPGSGGGC 296
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 441 VEVACGGGA-RAAVSLCLVAG*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRP 277
V CG + VS+C +G ASC + GP++P +G P T G P
Sbjct: 1194 VSSGCGSASGTVTVSVCSPSG----ASCSGYSTGGPSTPVACNSDGTGSPATIGSP 1245
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 441 VEVACGGGA-RAAVSLCLVAG*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRP 277
V CG + VS+C +G ASC + GP++P +G P T G P
Sbjct: 1207 VSSGCGSASGTVTVSVCSPSG----ASCSGYSTGGPSTPVACNSDGTGSPATIGSP 1258
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDG-RPPANAPGGTTG 247
G + PRG G P G RPP APGG G
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 441 VEVACGGGA-RAAVSLCLVAG*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRP 277
V CG + VS+C +G ASC + GP++P +G P T G P
Sbjct: 1195 VSSGCGSASGTVTVSVCSPSG----ASCSGYSTGGPSTPVACNSDGTGSPATIGSP 1246
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 441 VEVACGGGA-RAAVSLCLVAG*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRP 277
V CG + VS+C +G ASC + GP++P +G P T G P
Sbjct: 1207 VSSGCGSASGTVTVSVCSPSG----ASCSGYSTGGPSTPVACNSDGTGSPATIGSP 1258
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTT 250
GPA A P G G P GRP NA GG++
Sbjct: 224 GPAGDAGSP-GQPGAPGQPGRPGKNAQGGSS 253
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 375 GAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
G +C A GP P P G +G P DG+P A + GG G
Sbjct: 181 GCKTCPA----GPPGPP-GPAGQAGRPGNDGQPGAPSFGGGVG 218
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTGNLTGC 232
GPA PA D G G P G P A G G+ GC
Sbjct: 271 GPAGPAGDA-GPDGAPGNAGAPGAPGEAGAPGSGGGC 306
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
GPA PA P+G +G +DG+P A G G
Sbjct: 163 GPAGPA-GPKGPNGNSGSDGQPGAPGNNGNAG 193
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
GPA PA P+G +G +DG+P A G G
Sbjct: 225 GPAGPA-GPKGPNGNSGSDGQPGAPGNNGNAG 255
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
GPA PA P+G +G +DG+P A G G
Sbjct: 162 GPAGPA-GPKGPNGNSGSDGQPGAPGNNGNAG 192
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
GPA PA P+G +G +DG+P A G G
Sbjct: 162 GPAGPA-GPKGPNGNSGSDGQPGAPGNNGNAG 192
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
GPA PA P+G +G +DG+P A G G
Sbjct: 163 GPAGPA-GPKGPNGNSGSDGQPGAPGNNGNAG 193
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
GPA PA P+G +G +DG+P A G G
Sbjct: 163 GPAGPA-GPKGPNGNSGSDGQPGAPGNNGNAG 193
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 342 GPASPA--VDPRGSSGFPRTDGRPPANAPGGTTGN 244
GPA P P G+ G P DG+P P G GN
Sbjct: 224 GPAGPPGPQGPPGAPGQPGHDGQPGTPGPKGPNGN 258
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTGNLTGC 232
GPA P D G G P G+P A G G+ GC
Sbjct: 265 GPAGPPGDA-GPDGAPGNPGQPGAPGDAGAPGSGGGC 300
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 339 PASPAVDPRGSSGFPRTDGRPPANAPGGTTGN 244
P +P D R G P T GRP G+ GN
Sbjct: 205 PGNPGKDGRKGRGHPGTAGRPGQPGKQGSAGN 236
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 375 GAASCDAVNVLGPASPAVDPRGSSGFPRTDGRP--PANAPG 259
G +C+A + GPA PA P G+ G P G P P N PG
Sbjct: 97 GGGNCEACCLPGPAGPAGAP-GNPGRPGKPGAPGLPGN-PG 135
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = -2
Query: 411 AAVSLCLVAG*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTGN 244
A S G G SC + GPA P+ G+ G P GRP A GG GN
Sbjct: 90 AVDSFASSGGSGGGGSCSGCCLPGPAGPS----GAPGKPGRPGRPGA---GGLPGN 138
>Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical
protein C39E9.3 protein.
Length = 308
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -2
Query: 366 SCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTGNLTG 235
+C+ N PA P+ G G P DG P P G G TG
Sbjct: 101 NCNLENNNCPAGPS----GPKGLPGQDGAPGEPGPAGKMGQNTG 140
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 342 GPASP--AVDPRGSSGFPRTDGRPPANAPGGTTG 247
GP P AV P G SG P G P +P G G
Sbjct: 187 GPQGPPGAVGPCGPSGIPGLPGNPGYTSPPGLPG 220
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 417 ARAAVSLCLVAG*RGAASCD--AVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
+RAAV+ L + A C+ A + PA P PRG +G P DG + P G G
Sbjct: 65 SRAAVTAMLFGRNKRNAQCNCGAKSKGCPAGPP-GPRGPNGAPGLDGPDGLDGPDGHPG 122
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -2
Query: 387 AG*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTGN 244
AG G+AS + GP P P G G P G P + P G GN
Sbjct: 83 AGVAGSASGSSGCNCGP-QPKDCPAGPPGPPGNPGTPGDDGPAGRAGN 129
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 244 ITSCASWCVGRGSSIRPRETRASTGVNGRTC 336
I C + C G G I+P G G TC
Sbjct: 824 IPRCLTNCTGHGKCIQPNSCECDAGWMGETC 854
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -2
Query: 384 G*RGAASCDAVNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
G GA D + GP P G +G P DG+P A P G G
Sbjct: 130 GPSGAPGADG-DAAGPGEAG--PAGPAGPPGPDGQPGAPGPNGQPG 172
>Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical
protein M7.10 protein.
Length = 220
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 336 ASPAVDPRGSSGFPRTDGRPPANAPGGTTGNLTG 235
+SP DP+G G R G PGG G G
Sbjct: 165 SSPKRDPKGPGGLRRPKGPKGPKGPGGPHGKPPG 198
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 342 GPASPAVDPRGSSGFPRTDGRPPANAPGGTTGN 244
GPA P P+G+ G G P P GT GN
Sbjct: 144 GPAGPP-GPQGNKGPLGPPGPPGPEGPNGTAGN 175
>AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen
protein 56 protein.
Length = 321
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 354 VNVLGPASPAVDPRGSSGFPRTDGRPPANAPGGTTG 247
+N GP +V PRG +G P GR NAP G+ G
Sbjct: 206 MNTRGPKG-SVGPRGLTGQPGMPGR-TVNAPPGSPG 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,203,994
Number of Sequences: 27780
Number of extensions: 298934
Number of successful extensions: 1284
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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