Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_E17
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 221 7e-59
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 122 5e-29
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 119 3e-28
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 119 3e-28
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 106 3e-24
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 89 7e-19
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 79 6e-16
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 32 0.086
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 31 0.20
SPBC776.06c |||spindle pole body interacting protein |Schizosacc... 27 2.5
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 26 5.7
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 25 9.9
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 25 9.9
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 25 9.9
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 221 bits (540), Expect = 7e-59
Identities = 106/203 (52%), Positives = 146/203 (71%), Gaps = 1/203 (0%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMAF 238
G LLQVEY QEAVR+G+TA E+K+V KLQ +KI ++D+HV +AF
Sbjct: 15 GRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMVDNHVCLAF 74
Query: 239 AGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLI 418
AGL ADARILI++A++E Q+HKL + DPV++EY+TRY+AG++QKYTQS G RPFG+S LI
Sbjct: 75 AGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLI 134
Query: 419 GGFDY-DGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAI 595
GFD D +P ++QTEP+GIY WKA A GR++K RE+LEKN+ E + + + LA+
Sbjct: 135 AGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNW--KEGLSRDETIHLAV 192
Query: 596 RALLEVVQSGQKNLXIAVMRRGQ 664
+LLEVVQ+ N+ +A+M G+
Sbjct: 193 SSLLEVVQTASGNIELAIMDPGK 215
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 122 bits (294), Expect = 5e-29
Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 4/202 (1%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMAF 238
G L+Q+EYA AV G T+ EKK ++L ++ K+C + + M +
Sbjct: 16 GKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVY 75
Query: 239 AGLTADARILINRAQIECQS--HKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISC 412
+G+ D R+L+++++ Q+ K+ E P T + + + IA + Q+ TQS G RPFG+S
Sbjct: 76 SGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPT-KILVQEIASVMQESTQSGGVRPFGVSL 134
Query: 413 LIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLA 592
L+ G D G P L+Q +PSG Y+ WKA A G+S+ + FLEK Y DE+ ++ AV A
Sbjct: 135 LVAGMDEKG-PSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYN-DELELDD-AVHTA 191
Query: 593 IRALLEVVQS--GQKNLXIAVM 652
I AL E + + N+ IAV+
Sbjct: 192 ILALKETFEGELTEDNIEIAVV 213
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 119 bits (287), Expect = 3e-28
Identities = 69/189 (36%), Positives = 102/189 (53%), Gaps = 1/189 (0%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKL-QEERTVRKICLLDDHVVMA 235
G L QVEYA EA+ A EKK +KL ++E + K+ + D+++ A
Sbjct: 16 GRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCA 75
Query: 236 FAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCL 415
AGLTADA ILIN A+ Q + T + + E + R + LKQ YTQ G RPFG+S L
Sbjct: 76 VAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFL 135
Query: 416 IGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAI 595
G+D+ LFQ+ PSG Y W+AN+ G ++ +V+ + + Y D E A +A+
Sbjct: 136 YAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASA--MAV 193
Query: 596 RALLEVVQS 622
+ L + + S
Sbjct: 194 KFLSKTLDS 202
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 119 bits (287), Expect = 3e-28
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 8/204 (3%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMAF 238
G L QVEYA EA++ GSTA EK+ + L E +V K+ +D H+ A
Sbjct: 19 GRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAI 78
Query: 239 AGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNG------RRPF 400
+GLTADAR +I A+++ Q+H+ T ++P +E T+ I L ++ + RPF
Sbjct: 79 SGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPF 138
Query: 401 GISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGA 580
G++ LI G D G P L+ +EPSG Y+ ++A A G ++ + L K + D E A
Sbjct: 139 GVALLIAGIDEHG-PQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEE--A 195
Query: 581 VKLAIRALLEVVQS--GQKNLXIA 646
L ++ L +V++ KN+ +A
Sbjct: 196 EVLILKVLRQVMEEKLDSKNVQLA 219
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 106 bits (255), Expect = 3e-24
Identities = 59/191 (30%), Positives = 99/191 (51%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMAF 238
G L QVEYA EA+++GS K++ +L + +K+ +DDH+ +A
Sbjct: 17 GRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ--KKLIRIDDHIGIAI 74
Query: 239 AGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLI 418
AGL DAR+L N + E S K P+ + + +A Q TQ GRRP+G+ L+
Sbjct: 75 AGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLV 134
Query: 419 GGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAIR 598
G+D G PHL + +PSG+ E+ + G +++ R ++E+N ++ + A+R
Sbjct: 135 IGYDESG-PHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFPDSSREELILSALR 193
Query: 599 ALLEVVQSGQK 631
AL + + Q+
Sbjct: 194 ALRDTLSKDQE 204
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 88.6 bits (210), Expect = 7e-19
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Frame = +2
Query: 44 YFLLXGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDH 223
+F G L Q EYA +AV ST EK +KL + R +I +D H
Sbjct: 13 FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRH 72
Query: 224 VVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFG 403
+ +A G D + ++ RA+ E S + P+ I + Q +T + RPFG
Sbjct: 73 IGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFG 132
Query: 404 ISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEK-NYTADEVATENGA 580
+ + +D +G PHL+ EP+G+Y+ + A G+ + R LEK N+++ ++ A
Sbjct: 133 VMSFVATYDSEG-PHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKM---KDA 188
Query: 581 VKLAIRAL 604
VK A R L
Sbjct: 189 VKEAARIL 196
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 79.0 bits (186), Expect = 6e-16
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRK-GSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMA 235
G L QVEYA +A G T+ +KK KL + TV+ + + +
Sbjct: 18 GRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKGIGCV 77
Query: 236 FAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCL 415
G ADAR ++RA+ E + P+ + + + +A + Q TQ RP G++
Sbjct: 78 MTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMT 137
Query: 416 IGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATE-NGAVKLA 592
+ D + P LF+ +P+G Y +KA + G +LEK + D + + V+
Sbjct: 138 LVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETG 197
Query: 593 IRALLEVVQSGQKN--LXIAVMRRGQP 667
I+AL+ + + K+ L I V+ +P
Sbjct: 198 IQALMSSLSTDFKSTELQIGVVEDDKP 224
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 31.9 bits (69), Expect = 0.086
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = +2
Query: 218 DHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRR- 394
D +V+ +G ADA L+ R Q + E ++ + + L G+R
Sbjct: 52 DDLVIGASGFEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLY------GKRF 105
Query: 395 -PFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 538
P+ + + G D +G ++ +P G Y A G +A + FL+
Sbjct: 106 FPYYVYTTVAGIDKEGKGEIYSFDPVGSYEREWCRAGGSAANFITPFLD 154
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/72 (19%), Positives = 37/72 (51%)
Frame = +2
Query: 158 KKSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEY 337
+ S L +TV+K+ ++ +++ AG AD + +EC+ H+L ++ +++
Sbjct: 80 RASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSA 139
Query: 338 ITRYIAGLKQKY 373
++ ++ + Y
Sbjct: 140 ASKILSNITYSY 151
>SPBC776.06c |||spindle pole body interacting protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -1
Query: 273 FINIRASA-VNPANAITT*S--SKRHIFLTVRSSCNLATDF 160
F+N SA +NP N + T SK+ +FLT SS ++ DF
Sbjct: 261 FMNTDISADINPINVLITALLISKKVLFLTKTSSASVLADF 301
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 5.7
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Frame = -1
Query: 438 PS*SNPPIKHEIPNGRRPLL*VYFCLRP--------AMYLVIYS-NVTGSSTVNLCD*HS 286
P+ P +IPN R +L + C P MYL S N T S + L HS
Sbjct: 375 PNFPEPKFFEDIPNTERCILSAFICSPPQLPLPNPLRMYLPCPSLNSTEVSVITLAPQHS 434
Query: 285 ICARFINIR-ASAVNPANAITT*SSKR 208
IN+ A A+ IT + KR
Sbjct: 435 FLNIVINLNPALALKSYTIITLLNGKR 461
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 436 IIVESSYQTRNTKWSTTIALSIFLFETCYVSCNILQCYWILD 311
II S Y+T N W++TI ++CN+LQ + +D
Sbjct: 549 IIYPSLYKTANEHWNSTIQA---------IACNVLQIFVDMD 581
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 25.0 bits (52), Expect = 9.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 373 IFLFETCYVSCNILQC 326
I LF+TCY+ C + C
Sbjct: 567 IVLFDTCYMVCTYIVC 582
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 440 SPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTA 553
SP LF I + NAT S +V FL+K T+
Sbjct: 247 SPKLFSPSKQAIMGTRQPNATSGSPLSVTPFLQKTSTS 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,665,272
Number of Sequences: 5004
Number of extensions: 54082
Number of successful extensions: 154
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -