Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_E17
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 261 4e-70
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 113 8e-26
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 107 5e-24
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 103 2e-22
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 97 1e-20
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 41 0.001
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 29 2.3
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 29 2.3
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 29 2.3
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 29 4.0
U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 261 bits (639), Expect = 4e-70
Identities = 120/200 (60%), Positives = 157/200 (78%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMAF 238
GHL QVEYAQEAV+KGSTA EKKS+ LQ++RT+RKI ++DDHV++AF
Sbjct: 15 GHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAF 74
Query: 239 AGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLI 418
AGL+ADAR+L++RA+IECQS+KLT+EDPVT+ YI+RYIA KQ++TQS GRRPFGIS LI
Sbjct: 75 AGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLI 134
Query: 419 GGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAIR 598
GGFD+DG+P LF+TEPSG YYE+ ANATGR K VRE+LE+ Y+ + E +KL ++
Sbjct: 135 GGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVK 194
Query: 599 ALLEVVQSGQKNLXIAVMRR 658
+L +VV G +N+ IAVM++
Sbjct: 195 SLAQVVPPGSQNIEIAVMKK 214
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 22 RYDRAITVFSPXWTFITSRICSRSCQKG 105
RYDRAIT+FSP + +KG
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKG 30
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 113 bits (273), Expect = 8e-26
Identities = 66/202 (32%), Positives = 111/202 (54%), Gaps = 4/202 (1%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMAF 238
G L QVEYA EAV+ GST+ EK+S +KL + KI +D H+ + F
Sbjct: 19 GRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTF 78
Query: 239 AGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY----TQSNGRRPFGI 406
AGL AD+R L+ RAQIE Q+ T + +E +T+ +A L ++ +++ RPFG+
Sbjct: 79 AGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGV 138
Query: 407 SCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVK 586
+ L G D +G+ LF +PSG + + KA + G ++ + L++ Y D + + G +K
Sbjct: 139 AMLFAGVDQEGA-KLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQY-HDALTIKEG-LK 195
Query: 587 LAIRALLEVVQSGQKNLXIAVM 652
+A+ L +V++ + + V+
Sbjct: 196 MALAILKQVMEEKLNSANVEVV 217
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 107 bits (258), Expect = 5e-24
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 3/203 (1%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTV-RKICLLDDHVVMA 235
G L QVEYA EA+ T E+K+V KL ++ + K+ L D++
Sbjct: 16 GRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCT 75
Query: 236 FAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCL 415
AG+TADA ILIN + S++ + + + +E + + + KQ+YTQ G+RPFG+S L
Sbjct: 76 VAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLL 135
Query: 416 IGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAI 595
G+D L+Q++PSG Y WKA G + + L++ Y + + A +LAI
Sbjct: 136 YIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPNL---EEAKQLAI 192
Query: 596 RALLEV--VQSGQKNLXIAVMRR 658
+ L + V+ + + +AV+ R
Sbjct: 193 KVLWKTLDVKLASEKVEMAVLTR 215
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 103 bits (246), Expect = 2e-22
Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMAF 238
G L+Q+EYA AV+ G + E ++ V +I H+ +
Sbjct: 16 GKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLTDDQPKVEQI---SKHIGCVY 72
Query: 239 AGLTADARILINRAQ-IECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCL 415
+G+ D RIL+ +A+ I + + E+ T++ +T IA + Q+YTQS G RPFG S L
Sbjct: 73 SGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQEYTQSGGVRPFGASLL 131
Query: 416 IGGFDYD-GSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLA 592
I G+D + G P LFQ +PSG Y+ WKA A G++ + FLEK ++ E + + A
Sbjct: 132 IAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFS--EALELDDGIHTA 189
Query: 593 IRALLEVVQSG--QKNLXIAV 649
+ L E G + N+ +AV
Sbjct: 190 LLTLRESFDVGMNENNVEVAV 210
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 96.7 bits (230), Expect = 1e-20
Identities = 60/193 (31%), Positives = 97/193 (50%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMAF 238
G L QVEYA EA+++GS K++ L + +K+ +D H ++
Sbjct: 17 GRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ--KKVYEIDTHAGVSI 74
Query: 239 AGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLI 418
AGL +D RIL Q EC S + + V ++ + + Q TQ GRRPFG+ LI
Sbjct: 75 AGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILI 134
Query: 419 GGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAIR 598
G+D DG+ H+ QT+PS + G +++ R +LE+N E +T + A+
Sbjct: 135 AGYDKDGA-HIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALL 193
Query: 599 ALLEVVQSGQKNL 637
AL + + + ++NL
Sbjct: 194 ALRDTLPA-EENL 205
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 73.3 bits (172), Expect = 1e-13
Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 1/183 (0%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGS-TAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMA 235
G + QVEYA +A+ + TA +K+ L TV + + V
Sbjct: 20 GRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCC 79
Query: 236 FAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCL 415
G+ DA+ I RAQ E S K + E + + +A L Q YTQ+ R G + L
Sbjct: 80 AIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALL 139
Query: 416 IGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAI 595
+D + P +++ +P+G Y K + G FLEK T A++LAI
Sbjct: 140 FISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAI 199
Query: 596 RAL 604
AL
Sbjct: 200 EAL 202
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 66.1 bits (154), Expect = 2e-11
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 1/196 (0%)
Frame = +2
Query: 59 GHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKICLLDDHVVMAF 238
G + QVEYAQ+AV T +K +KL + ++ ++D+V +A
Sbjct: 19 GRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAV 78
Query: 239 AGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLI 418
AG D L N A E +P+ ++ I +A +T R PFG
Sbjct: 79 AGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGISR-PFGAGAFF 137
Query: 419 GGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAVKLAIR 598
++ LF EPSG+ YE+KA A G+ + + +EK E N VK A R
Sbjct: 138 MSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK--LKIEELDVNQLVKEAAR 195
Query: 599 ALLEV-VQSGQKNLXI 643
++ V ++ KN+ I
Sbjct: 196 IIMVVRDENKDKNVQI 211
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 1/169 (0%)
Frame = +2
Query: 80 YAQEAVRKGSTAXXXXXXXXXXXXXEKK-SVAKLQEERTVRKICLLDDHVVMAFAGLTAD 256
Y QE + G+T + + S R KI + D++V+ +G AD
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 257 ARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYD 436
+ + + A+ + +T PVT+ ++ Y R S L+ G+D +
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNY-----REQLSASVLVAGWDEE 129
Query: 437 GSPHLFQTEPSGIYYEWKANATGRSAKTVREFLEKNYTADEVATENGAV 583
++ G ++ A+G + V+ FL+ + + E A+
Sbjct: 130 LGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAI 178
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 314 EDPVTLEYITRY---IAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEP-SGIYY 481
++P+T E++TRY + Q +T SNGR+ + FD S TEP +G YY
Sbjct: 689 KNPITKEFVTRYTTEVHSKNQSFTDSNGRQ-----AMERFFDGATSFEYSDTEPIAGNYY 743
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = +2
Query: 188 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 367
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 368 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 538
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/117 (17%), Positives = 48/117 (41%)
Frame = +2
Query: 188 RTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQ 367
R KI +L+D++++ +G D L Q ++ ++++ ++ +
Sbjct: 81 RDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS--RN 138
Query: 368 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKANATGRSAKTVREFLE 538
Y + P+ ++ G D G +F +P G +A+G + + FL+
Sbjct: 139 LYYRRFF--PYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLD 193
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 509 SAKTVREFLEKNYTADEVATENGAVKL 589
S K VR LEKNYTA++ E V+L
Sbjct: 568 SKKYVRPLLEKNYTANKAKKEGKLVEL 594
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 509 SAKTVREFLEKNYTADEVATENGAVKL 589
S K VR LEKNYTA++ E V+L
Sbjct: 568 SKKYVRPLLEKNYTANKAKKEGKLVEL 594
>U23177-7|AAM22053.1| 867|Caenorhabditis elegans Hypothetical
protein C56G2.1a protein.
Length = 867
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +2
Query: 473 IYYEWKANATGRSAKTVREF----LEKNYTADEVATENGAVKLA 592
++Y K + GR K V + L K TA +V TENG VK A
Sbjct: 124 VWYINKKDKDGRKKKKVGDVISNGLPKTATASDVQTENGNVKKA 167
>Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical
protein T15D6.11 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -3
Query: 505 TSCISFPFIIYT--RRFSLEQVW*TIIVESSYQTRNT 401
+SCI F F++YT RF + VW T+ E YQ + T
Sbjct: 19 SSCIVFGFVLYTFAPRFHTKIVWDTLDGE-GYQFKET 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,803,780
Number of Sequences: 27780
Number of extensions: 310886
Number of successful extensions: 820
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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