Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_E14
(861 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2... 292 4e-80
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 269 3e-73
SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5 |Schiz... 31 0.21
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 28 1.5
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 26 6.0
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 26 7.9
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 26 7.9
>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 292 bits (717), Expect = 4e-80
Identities = 143/239 (59%), Positives = 178/239 (74%), Gaps = 1/239 (0%)
Frame = +2
Query: 146 MVXKSIKARQIFDSRGNPTVEVDLVTXLGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 325
M + + ARQI+DSRGNPTVEVDL T G+ RA VPSGASTG+ EALE+RD K+++ GK
Sbjct: 1 MAIQKVFARQIYDSRGNPTVEVDLTTETGIHRAIVPSGASTGIWEALEMRDGDKTKWGGK 60
Query: 326 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXX 505
GVL A+ N+N +IAP + KANL+VT Q+ DE +LKLDGTENKSKLGANAILGVS+
Sbjct: 61 GVLKAVGNVNNIIAPAVVKANLDVTDQKAADEFLLKLDGTENKSKLGANAILGVSMAICR 120
Query: 506 XXXXXXNVPLYKHLADLAG-NNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFS 682
+PL+K++A+ G VLPVP+FNV+NGGSHAG LA QEFMI PTGA +FS
Sbjct: 121 AGAAQKKLPLWKYIAENFGTKGPYVLPVPSFNVLNGGSHAGGDLAFQEFMILPTGAPSFS 180
Query: 683 EAMRMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIXKAGYAG 859
EAMR G+E YH LK I K+++G + VGDEGG AP++Q ++AL LI +AI KAGY G
Sbjct: 181 EAMRWGAETYHTLKSIAKKRYGSSAGNVGDEGGIAPDLQTPQEALDLIVEAINKAGYEG 239
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 269 bits (660), Expect = 3e-73
Identities = 129/236 (54%), Positives = 170/236 (72%), Gaps = 1/236 (0%)
Frame = +2
Query: 155 KSIKARQIFDSRGNPTVEVDLVTXLGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVL 334
+ I +R I+DSRGNPTVEV+L T LG FR+ VPSGASTG EA ELRDN K+++ GKGV
Sbjct: 5 QKIYSRSIYDSRGNPTVEVELTTELGTFRSMVPSGASTGEWEAKELRDNDKNKWGGKGVT 64
Query: 335 TAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLXXXXXXX 514
A+ N+N +I P L K+++++T QR IDE M+KLDGT +KSKLGAN+I+GVS+
Sbjct: 65 IAVHNVNNIIGPALVKSDIKITDQRGIDEFMIKLDGTNDKSKLGANSIVGVSMAVARAAA 124
Query: 515 XXXNVPLYKHLADLAGNNDI-VLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSEAM 691
+PLY+++ LAG+ +PVP+FNV+NGG HAG LA QEFMI P A TFSE +
Sbjct: 125 AFLKIPLYEYIGKLAGSKTTECIPVPSFNVLNGGRHAGGDLAFQEFMIMPIKAPTFSEGL 184
Query: 692 RMGSEVYHHLKKIIKEKFGLDSTAVGDEGGFAPNIQNNKDALYLIQDAIXKAGYAG 859
R GSEVYH LK + K+K+G + VGDEGG AP++ ++AL L+ +AI +AGY G
Sbjct: 185 RWGSEVYHTLKALAKKKYGASAGNVGDEGGIAPDLTTAEEALDLVNEAIKEAGYDG 240
>SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 261
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 699 PILMASLKVDAPVGKIMNSCMASLFPACDPPLITLKAGTGRTMSL 565
PI+ S + + +G+ +N + LFP+CD LI G T+ L
Sbjct: 192 PIIQTSAPLGSSLGEFLNKRLPDLFPSCDKFLIVKPVIHGITIFL 236
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +2
Query: 182 DSRGNPTVEVDLVTXLGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINEL 361
D +G +VD ++A +ST LE R N + E V TAI + E
Sbjct: 140 DEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDD-AVHTAILALKET 198
Query: 362 IAPELTKANLEV 397
ELT+ N+E+
Sbjct: 199 FEGELTEDNIEI 210
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 454 FVLSAIQLKHEFINLSLLGYFKVGFG 377
F +S+I+ KH++IN+ Y +G G
Sbjct: 113 FSISSIKTKHDYINIIKKHYVSLGVG 138
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 25.8 bits (54), Expect = 7.9
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 296 DNIKSEY-HGKGVLTAIKNINELIAPELTKANLEVTQQRE-IDELMLKLDGTENKSK 460
D++K E KG +T +KN + + E T EVT ++ I +L K+D + +++
Sbjct: 225 DSVKGEMAEMKGEMTIMKNDIDSVKGETTTLKGEVTAMKDSISQLDRKIDLLDQRTE 281
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = -3
Query: 613 SSIDHIESWYR*NNVIISSQISQVLV 536
+S+++++SWY+ N I++ +SQ L+
Sbjct: 775 ASLENVDSWYQDINEIVNIIVSQRLI 800
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,249,319
Number of Sequences: 5004
Number of extensions: 62012
Number of successful extensions: 136
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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