Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E10
         (837 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7CPC4 Cluster: Putative uncharacterized protein precur...    35   2.2  
UniRef50_A4Q7K5 Cluster: Immunoglobulin/major histocompatibility...    35   2.9  
UniRef50_Q1FKX4 Cluster: Helicase-like:DEAD/DEAH box helicase-li...    33   6.7  
UniRef50_Q55YU4 Cluster: Putative uncharacterized protein; n=2; ...    33   6.7  
UniRef50_A6R0C2 Cluster: Predicted protein; n=1; Ajellomyces cap...    33   6.7  
UniRef50_Q6AGV4 Cluster: Structural phage protein; n=1; Leifsoni...    33   8.9  

>UniRef50_A7CPC4 Cluster: Putative uncharacterized protein
           precursor; n=4; Opitutaceae bacterium TAV2|Rep: Putative
           uncharacterized protein precursor - Opitutaceae
           bacterium TAV2
          Length = 172

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 652 RRPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKP 828
           ++P+     A+  +  KP    P  T  PQ +  A  Q PVKV +++   P  K  S P
Sbjct: 27  KQPTMLERLAMVARIEKPPAAQPAVTPAPQCVDAASAQDPVKVEDVRAPEPEVKPASLP 85


>UniRef50_A4Q7K5 Cluster: Immunoglobulin/major histocompatibility
           complex; Tetratricopeptide- like helical; n=2; core
           eudicotyledons|Rep: Immunoglobulin/major
           histocompatibility complex; Tetratricopeptide- like
           helical - Medicago truncatula (Barrel medic)
          Length = 857

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -2

Query: 425 GDSCCSKSNSA*SLEIPLSEQVLLIALEVSDTFSEHMLKSGIDSS 291
           GD C    +    L + L+ Q LL AL + D++S + LKSG+ S+
Sbjct: 539 GDDCVPGEDGRLKLSMSLARQCLLNALHLLDSYSTNRLKSGLPSN 583


>UniRef50_Q1FKX4 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
           n=1; Clostridium phytofermentans ISDg|Rep:
           Helicase-like:DEAD/DEAH box helicase-like - Clostridium
           phytofermentans ISDg
          Length = 1759

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = -1

Query: 147 IYESQLNFFYKKKLEMFLCSIKKYWDL 67
           +Y+++L+FFY K+ EMF   +KKY +L
Sbjct: 782 VYDNKLSFFYGKEKEMFKRQLKKYEEL 808


>UniRef50_Q55YU4 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 807

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
 Frame = +1

Query: 565 FDMQDFEQNVVPGFINANTFHSPGKNGRKRRPSTS------SLNAVQTKHHKPTIKLPGT 726
           F+  D+E   + GF  ++T +S        +PSTS      S N+  T H    I  PGT
Sbjct: 30  FNSDDYELGPIIGFGASSTVYSAVFTPPSPQPSTSPSVSSTSSNSTSTPH-STHISSPGT 88

Query: 727 TQKPQLIVT 753
           ++KP+L +T
Sbjct: 89  SRKPRLSIT 97


>UniRef50_A6R0C2 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 376

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 630 PG*ERAKTSPFNVVAKCRPNQTPQADDKVARDHAKTAANRDGPTAETGQSGQH 788
           PG    +TSP +  +K    +  Q  DK  R +A  AANR  P A   +SG +
Sbjct: 109 PGDSHGRTSPRHQRSKAAGIRKSQKKDKPTRQNADRAANRVAPIANELESGSN 161


>UniRef50_Q6AGV4 Cluster: Structural phage protein; n=1; Leifsonia
           xyli subsp. xyli|Rep: Structural phage protein -
           Leifsonia xyli subsp. xyli
          Length = 231

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = -2

Query: 674 SDDVEGRRFRPFLPGLWNVFALMNPGTTFCSKSCISKTSSARSVELLDVSFESRMTTSWV 495
           S  + G   R F PGL N  +   PG  F S + I+ + SA + +L  + + +  T++W 
Sbjct: 148 SSIINGGVERVFNPGL-NDNSAAAPGMVFASDANITASDSANAAKLAGLGYAANPTSAWT 206

Query: 494 LG 489
            G
Sbjct: 207 TG 208


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,443,069
Number of Sequences: 1657284
Number of extensions: 16884766
Number of successful extensions: 51342
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 48795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51293
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)