Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E10
         (837 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    29   0.046
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.56 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   4.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.1  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 29.1 bits (62), Expect = 0.046
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = +1

Query: 151 DVTLKSEVYSNMDKKVDLLSLIESDTWTAPNELMEIFSMDQDYLDFLEESIPDFNICSEN 330
           DV  K    S  DK+  L+S++E     APNE   IF   +   DFL   + + NI S +
Sbjct: 383 DVEQKFFQVSKFDKRSKLVSILEK----APNERTLIFVETKRNADFLATFLSEQNIQSTS 438

Query: 331 V 333
           +
Sbjct: 439 I 439


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 123 FYKKKLEMFLCSIKKYWDLDTVLSAFFNY 37
           F+ KK+E  +CSIK   +L+ + + FF +
Sbjct: 189 FFAKKMEGLVCSIK---ELNMIFNEFFGW 214


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 724  TTQKPQLIVTAQPQKPVKVANI 789
            TT KP   +  +PQ+PV  A +
Sbjct: 2213 TTMKPTTTIGYEPQEPVLPAEV 2234


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 443 EFCMRNGDSC 414
           EFC RNG +C
Sbjct: 62  EFCQRNGHNC 71


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 732 KTAANRDGPTAETGQSGQHTSTEP 803
           K     DGP   +  SGQ+T+ +P
Sbjct: 887 KVKLEYDGPYETSISSGQYTTKDP 910


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 86  SKSTGILIQYCRLFLTIYCAAYGKVT 9
           +++TG+ +  CRLF +   A + K T
Sbjct: 43  TEATGLSLPACRLFCSEAAALWPKPT 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,108
Number of Sequences: 336
Number of extensions: 4337
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)