Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E10
         (837 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0998 - 10136050-10138356                                         31   1.1  
02_05_1214 + 34976814-34979813                                         30   2.6  
01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817...    28   8.0  

>08_01_0998 - 10136050-10138356
          Length = 768

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -3

Query: 727 WSRATLSSACGVWFGRHLATTLKGDVFARSYPGCGMY 617
           WS AT SSAC  W  R +     G V   S PG G++
Sbjct: 63  WSPATSSSACSSW--RGVTCDAAGHVAELSLPGAGLH 97


>02_05_1214 + 34976814-34979813
          Length = 999

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 703 PTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKPV 831
           P +  P   Q+ Q +V  QP  P   A + +L P   V  KPV
Sbjct: 172 PPVTGPKKQQQQQPVVAVQPPPPQPEAPMDILPPPAPVLMKPV 214


>01_03_0255 -
           14281004-14281066,14281114-14281203,14281672-14281737,
           14281837-14281907,14282021-14282153,14282245-14283898,
           14285346-14285935
          Length = 888

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 580 FEQNVVPGFINANTFHSPGKNGRKRRPSTSSLNAVQTKHHKP 705
           FE +V+PGF  + + H       + RP   S+++ +T    P
Sbjct: 178 FEDDVIPGFGESTSHHDSPWEEPRTRPENESISSSKTSVSMP 219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,923,361
Number of Sequences: 37544
Number of extensions: 456919
Number of successful extensions: 1265
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)