BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_E10
(837 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 25 3.8
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 25 3.8
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 24 5.0
AY176051-1|AAO19582.1| 522|Anopheles gambiae cytochrome P450 CY... 24 6.6
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 24 6.6
AF525673-3|AAM82612.1| 58|Anopheles gambiae cecropin CecC prot... 24 6.6
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
protein protein.
Length = 1881
Score = 24.6 bits (51), Expect = 3.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 430 ETGTVAVQNRIQHDHWKF 377
ETG + V+NRI H+ + +
Sbjct: 1008 ETGEIVVRNRIDHEEYSW 1025
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
dehydrogenase protein.
Length = 1325
Score = 24.6 bits (51), Expect = 3.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 443 EFCMRNGDSCCSKSN 399
EF +R GD CC N
Sbjct: 153 EFALRMGDKCCRNGN 167
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 24.2 bits (50), Expect = 5.0
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 648 KTSPFNVVAKCRPNQTPQADDKVARD 725
KT+ + +A C+ ++ P A +VAR+
Sbjct: 7 KTASIHGIASCKRHRDPNAIQRVARE 32
>AY176051-1|AAO19582.1| 522|Anopheles gambiae cytochrome P450
CYP12F1 protein.
Length = 522
Score = 23.8 bits (49), Expect = 6.6
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 637 KNGRKRRPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKV 780
+ GR + + L A + + I++ G +P ++VT QP+ KV
Sbjct: 61 EGGRYYELTGADLFARWRQDYGDLIRIKGMFGRPDIVVTFQPEDFAKV 108
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.8 bits (49), Expect = 6.6
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 655 RPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNP 804
RP++ + + T H+ P+ G+ P ++ QP +P A Q P
Sbjct: 353 RPTSRPVASGPTSHYYPSHIPAGSQPVPAVVNPQQPSRPTIPAPQQQTPP 402
>AF525673-3|AAM82612.1| 58|Anopheles gambiae cecropin CecC
protein.
Length = 58
Score = 23.8 bits (49), Expect = 6.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 713 FIVGLWCLVWTAFSDDVEGRRFRPFL 636
F+V L ++ AF EGRRF+ FL
Sbjct: 7 FLVAL--VLMAAFLGQTEGRRFKKFL 30
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 869,909
Number of Sequences: 2352
Number of extensions: 18000
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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