Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_E10
(837 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protei... 31 3.9
M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein. 31 3.9
AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency ... 31 3.9
AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency ... 31 3.9
AY055760-1|AAL25835.1| 419|Homo sapiens decay-accelerating fact... 30 9.0
AY055758-1|AAL25833.1| 422|Homo sapiens decay-accelerating fact... 30 9.0
AY055757-1|AAL25832.1| 316|Homo sapiens decay-accelerating fact... 30 9.0
AB240570-1|BAE97426.1| 551|Homo sapiens decay-accelerating fact... 30 9.0
AB240569-1|BAE97425.1| 525|Homo sapiens decay-accelerating fact... 30 9.0
>X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protein-2)
protein.
Length = 2500
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 655 RPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKPVE 834
+PS S Q+ H +P + Q P++ VT +P KP K Q P KPVE
Sbjct: 916 KPSPSQQVQQQSYHTQPRLVRQHNIQVPEIRVTEEPDKPEKEKEAQSKEP-----EKPVE 970
>M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein.
Length = 1833
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 655 RPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKPVE 834
+PS S Q+ H +P + Q P++ VT +P KP K Q P KPVE
Sbjct: 249 KPSPSQQVQQQSYHTQPRLVRQHNIQVPEIRVTEEPDKPEKEKEAQSKEP-----EKPVE 303
>AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 2 protein.
Length = 2446
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 655 RPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKPVE 834
+PS S Q+ H +P + Q P++ VT +P KP K Q P KPVE
Sbjct: 862 KPSPSQQVQQQSYHTQPRLVRQHNIQVPEIRVTEEPDKPEKEKEAQSKEP-----EKPVE 916
>AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency virus
type I enhancer-binding protein 2 protein.
Length = 2446
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 655 RPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKPVE 834
+PS S Q+ H +P + Q P++ VT +P KP K Q P KPVE
Sbjct: 862 KPSPSQQVQQQSYHTQPRLVRQHNIQVPEIRVTEEPDKPEKEKEAQSKEP-----EKPVE 916
>AY055760-1|AAL25835.1| 419|Homo sapiens decay-accelerating factor
4ab protein.
Length = 419
Score = 30.3 bits (65), Expect = 9.0
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 652 RRPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKP 828
++ +T +++A +T PT + P T P IVT PQKP + N+ P T V S P
Sbjct: 206 QKHTTENVSATRTP---PTPQKPTTVNVPATIVTPTPQKPTTI-NV----PATGVSSTP 256
>AY055758-1|AAL25833.1| 422|Homo sapiens decay-accelerating factor
1 ab protein.
Length = 422
Score = 30.3 bits (65), Expect = 9.0
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 652 RRPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKP 828
++ +T +++A +T PT + P T P IVT PQKP + N+ P T V S P
Sbjct: 206 QKHTTENVSATRTP---PTPQKPTTVNVPATIVTPTPQKPTTI-NV----PATGVSSTP 256
>AY055757-1|AAL25832.1| 316|Homo sapiens decay-accelerating factor
1a protein.
Length = 316
Score = 30.3 bits (65), Expect = 9.0
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 652 RRPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKP 828
++ +T +++A +T PT + P T P IVT PQKP + N+ P T V S P
Sbjct: 126 QKHTTENVSATRTP---PTPQKPTTVNVPATIVTPTPQKPTTI-NV----PATGVSSTP 176
>AB240570-1|BAE97426.1| 551|Homo sapiens decay-accelerating factor
splicing variant 5 protein.
Length = 551
Score = 30.3 bits (65), Expect = 9.0
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 652 RRPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKP 828
++ +T +++A +T PT + P T P IVT PQKP + N+ P T V S P
Sbjct: 335 QKHTTENVSATRTP---PTPQKPTTVNVPATIVTPTPQKPTTI-NV----PATGVSSTP 385
>AB240569-1|BAE97425.1| 525|Homo sapiens decay-accelerating factor
splicing variant 4 protein.
Length = 525
Score = 30.3 bits (65), Expect = 9.0
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 652 RRPSTSSLNAVQTKHHKPTIKLPGTTQKPQLIVTAQPQKPVKVANIQVLNPXTKVYSKP 828
++ +T +++A +T PT + P T P IVT PQKP + N+ P T V S P
Sbjct: 335 QKHTTENVSATRTP---PTPQKPTTVNVPATIVTPTPQKPTTI-NV----PATGVSSTP 385
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,173,857
Number of Sequences: 237096
Number of extensions: 2634682
Number of successful extensions: 6216
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6216
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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