Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_E07
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 192 5e-48
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 172 5e-42
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 171 1e-41
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 152 7e-36
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 134 1e-30
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 129 6e-29
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 115 1e-24
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 110 3e-23
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 103 3e-21
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 99 4e-20
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 93 5e-18
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 90 4e-17
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 79 1e-13
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 71 2e-11
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 55 1e-10
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 66 6e-10
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 61 2e-08
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 58 2e-07
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 56 6e-07
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 56 8e-07
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 54 3e-06
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 53 6e-06
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 50 3e-05
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 50 4e-05
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 50 5e-05
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 48 1e-04
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 40 0.034
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 39 0.078
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 38 0.18
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 34 2.9
UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein ... 33 3.9
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 5.1
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 33 5.1
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 6.7
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 192 bits (468), Expect = 5e-48
Identities = 95/155 (61%), Positives = 102/155 (65%)
Frame = +2
Query: 134 QNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 313
QNIRK IKDGL+IKKPV VHSR RVRKNTEARRKGRHCGFGKR+GTANARMP K LW
Sbjct: 39 QNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQR 98
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
+KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 99 QRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158
Query: 494 XXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAXEDE 598
L+ A EDE
Sbjct: 159 AEARRQKVREARKRREERIATKKQELIALHAKEDE 193
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +1
Query: 19 LRSLKLHHRLAASVXXCGXXQVWLDPNXINELANTNS 129
+ SLKL RLAASV CG +VWLDPN INE+ANTNS
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNS 37
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 172 bits (419), Expect = 5e-42
Identities = 82/155 (52%), Positives = 100/155 (64%)
Frame = +2
Query: 134 QNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 313
Q IRK IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 39 QQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRR 98
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
+KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 99 MRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
Query: 494 XXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAXEDE 598
+++T + E+E
Sbjct: 159 AEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE 193
Score = 49.2 bits (112), Expect = 7e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +1
Query: 28 LKLHHRLAASVXXCGXXQVWLDPNXINELANTNS 129
L+L RLA+SV CG +VWLDPN NE+AN NS
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANS 37
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 171 bits (416), Expect = 1e-41
Identities = 79/120 (65%), Positives = 92/120 (76%)
Frame = +2
Query: 134 QNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 313
Q IRK IKDGL+I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 31 QQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRR 90
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
+KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 91 MRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 150
Score = 45.6 bits (103), Expect = 9e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 43 RLAASVXXCGXXQVWLDPNXINELANTNS 129
RLA+SV CG +VWLDPN NE+AN NS
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANS 29
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 152 bits (368), Expect = 7e-36
Identities = 72/118 (61%), Positives = 84/118 (71%)
Frame = +2
Query: 140 IRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 319
IRK KD L+I+KPV VHSR+R RKN ARRKGRH G GKR+GTA+ARMPQK LW
Sbjct: 41 IRKLYKDNLIIRKPVTVHSRSRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMR 100
Query: 320 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
A KID+HLYH LY + KGN FKNKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 101 VLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
Score = 39.5 bits (88), Expect = 0.059
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 19 LRSLKLHHRLAASVXXCGXXQVWLDPNXINELANTNS 129
+ +L+ RLA++V CG ++WLDPN + N NS
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANS 37
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 134 bits (325), Expect = 1e-30
Identities = 63/120 (52%), Positives = 81/120 (67%)
Frame = +2
Query: 134 QNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 313
+++RK IKDG +I+KPV VHSRAR RK EA+ GRH G G+R G+ ARMP KELW
Sbjct: 59 KSVRKLIKDGFIIRKPVKVHSRARWRKMKEAKDMGRHNGVGRREGSREARMPSKELWMRR 118
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
KKIDRH+Y LYM+AKGNVF+NKR L+E+IH+ K EK + + L++Q
Sbjct: 119 LRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKRNLVEHIHKIKNEKKKERQLAEQ 178
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 25 SLKLHHRLAASVXXCGXXQVWLDPNXINELANTNS 129
SLKL RLA+S+ CG +VWLDPN E+ N NS
Sbjct: 23 SLKLQARLASSILGCGRARVWLDPNEAVEIQNANS 57
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 129 bits (311), Expect = 6e-29
Identities = 59/102 (57%), Positives = 70/102 (68%)
Frame = +2
Query: 188 VHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKID 367
+HSRAR + A+R GRH G+GKRRGT AR+P K LW AKKID
Sbjct: 77 IHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKID 136
Query: 368 RHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
+H+YHS+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 137 KHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 25 SLKLHHRLAASVXXCGXXQVWLDPNXINEL-ANTNSSXEHP*XDQGWSRHQETCSSTLP 198
SLKL RLAAS+ CG ++W+DPN + + + E P +G + +T T P
Sbjct: 3 SLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTFP 61
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 115 bits (276), Expect = 1e-24
Identities = 59/120 (49%), Positives = 76/120 (63%)
Frame = +2
Query: 134 QNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 313
Q IRK I+DGL+I KPV VHS+A KNT KGRH GK +GTAN +P++ W
Sbjct: 39 QLIRKLIEDGLIIWKPVTVHSQAHCEKNT---LKGRHMVIGKGKGTANIWVPERVTWMRR 95
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
+KKID H+ HSLY++ K NVFKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 96 MSILHRLLRRYCESKKIDCHMCHSLYLRVKRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
Score = 41.5 bits (93), Expect = 0.015
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +1
Query: 28 LKLHHRLAASVXXCGXXQVWLDPNXINELANTNS 129
L L RLA+SV CG +V LDPN N++AN NS
Sbjct: 4 LSLQKRLASSVLHCGKKKVQLDPNETNKIANANS 37
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 110 bits (264), Expect = 3e-23
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
Frame = +2
Query: 89 WIQMXSMSSQTPTPVQN-IRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRR 265
WI + T +N IRK I+DG ++KK HSR R+R E + GRH G GKR+
Sbjct: 23 WIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSRNRIRSRKEEIKLGRHEGLGKRK 82
Query: 266 GTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 445
G+ N+R K +W + K++RHLY SLY+K+KGNVFKNK++L E+I
Sbjct: 83 GSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKNKKILTEFI 142
Query: 446 HRKKAEKARTKMLSDQ 493
H+ K E+ R + D+
Sbjct: 143 HKAKNEQKRKEEFLDK 158
Score = 36.3 bits (80), Expect = 0.55
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 19 LRSLKLHHRLAASVXXCGXXQVWLDPNXINELANTNS 129
+ S+K+H +A+ + CG ++W+DPN + T+S
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDS 37
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 103 bits (247), Expect = 3e-21
Identities = 52/118 (44%), Positives = 67/118 (56%)
Frame = +2
Query: 140 IRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXX 319
IR I+ ++ K + SR R+R A+R GRH G GKRRGT ARMP K LW
Sbjct: 41 IRSLIESKIIAKLDIKGSSRGRIRARHAAKRLGRHSGHGKRRGTREARMPSKTLWIQRQR 100
Query: 320 XXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
+KIDRHLY +LY KAKGN+FKNKRVL+E+I + E+ K ++
Sbjct: 101 VLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKNKRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 99 bits (238), Expect = 4e-20
Identities = 49/111 (44%), Positives = 68/111 (61%)
Frame = +2
Query: 161 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXX 340
GL+I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 341 XXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
+KKIDR +YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 563 RYRESKKIDRRMYHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 93.1 bits (221), Expect = 5e-18
Identities = 46/120 (38%), Positives = 71/120 (59%)
Frame = +2
Query: 134 QNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 313
+ I++ IKD ++I K SR R RK EA++KGRH G GKR GTANARMPQK++W
Sbjct: 39 EQIKQLIKDNVIIMKQDKHTSRGRCRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKK 98
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
+I + + Y +AKG++FK++ + + I ++KA++ R K L++Q
Sbjct: 99 IRAMRAMLKEMRANGEITKEDFRVFYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 89.8 bits (213), Expect = 4e-17
Identities = 46/113 (40%), Positives = 61/113 (53%)
Frame = +2
Query: 134 QNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 313
++IR+ IK+G++ KKPV SR R R E ++KGRH G G R+G ARM +KELW
Sbjct: 39 EDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKT 98
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 472
KKIDR Y LY++AKG FK+K L ++ K R
Sbjct: 99 IRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
Score = 37.5 bits (83), Expect = 0.24
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = +1
Query: 19 LRSLKLHHRLAASVXXCGXXQVWLDPNXINELAN 120
+++LK+ R+AA + CG ++W+DP ++++A+
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVAS 34
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/110 (39%), Positives = 56/110 (50%)
Frame = +2
Query: 137 NIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXX 316
+IR IK+G++ KK S ARV+K E R+KGR G G RRG A AR P KE W
Sbjct: 42 DIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATI 101
Query: 317 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEK 466
+ KIDR +Y LY AKG F+++ L Y+ + K
Sbjct: 102 RALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMREHELLK 151
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/106 (35%), Positives = 53/106 (50%)
Frame = +2
Query: 137 NIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXX 316
+IR+ IK G++ K P+ SR R R+ E ++KGR G G R+G AR K W
Sbjct: 39 DIRELIKRGIIKKLPIEGQSRKRARELHEKKKKGRRRGPGSRKGKRTARADPKRQWINKV 98
Query: 317 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 454
K ID Y LY K KGN+FK++ L+ Y+ +K
Sbjct: 99 RAQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFKSRSHLLLYLKQK 144
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 55.2 bits (127), Expect(2) = 1e-10
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +2
Query: 362 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 493
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
Score = 33.5 bits (73), Expect(2) = 1e-10
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +2
Query: 80 RCG----WIQMXSMSS-QTPTPVQNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRH 244
RCG W+ S + Q IRK +DGL+I+K T ARR+G H
Sbjct: 50 RCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA-----------TLARRRGWH 98
Query: 245 CGFGKRRGT 271
G KR+GT
Sbjct: 99 MGIRKRKGT 107
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 66.1 bits (154), Expect = 6e-10
Identities = 43/121 (35%), Positives = 68/121 (56%)
Frame = -1
Query: 559 LGGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*V 380
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E +
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGL 110
Query: 379 V*MPVNLLGSSVLQEQFSKNPLSLYP*FLLWHTRIGCTSSLTKATVTTLSTCFCVFADTS 200
+ +P++L +V +Q +++ L+L P L HT + T++LT V + +T+
Sbjct: 111 IKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGTAALTVTAVAAEALSCMARTNTT 170
Query: 199 A 197
A
Sbjct: 171 A 171
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 60.9 bits (141), Expect = 2e-08
Identities = 30/96 (31%), Positives = 46/96 (47%)
Frame = +2
Query: 134 QNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 313
+++R+ I +G++ +P SR+R RK + KGR G G R+G+ANAR P+K W
Sbjct: 44 EDVRRLIDEGVIKARPFVGTSRSRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRT 103
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 421
I Y Y KAKG +++
Sbjct: 104 IRAQRKELKGMREDDSISSSEYRYYYRKAKGGSYRS 139
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/103 (32%), Positives = 47/103 (45%)
Frame = +2
Query: 137 NIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXX 316
++R IK G++ P ++ + RRKGR G G+R+G A AR+ KE W
Sbjct: 41 DVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRI 100
Query: 317 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 445
+ IDR Y LYM AKG F++ L Y+
Sbjct: 101 RKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRDLASLKRYM 143
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 56.0 bits (129), Expect = 6e-07
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +2
Query: 137 NIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANAR-MPQKELWXXX 313
++R +K+GL+ KP +SR R R E R+ GR G G RRGT AR KE+W
Sbjct: 36 DVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWVPR 95
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 445
ID+ + +LY AKG F++ L Y+
Sbjct: 96 IRRIRRFLNTLKHRGVIDKATWRNLYRMAKGGYFESLAHLRTYM 139
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 55.6 bits (128), Expect = 8e-07
Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Frame = +2
Query: 89 WIQMXSMSSQTP-TPVQNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRR 265
WI S+ T +++RK I ++ KK +S R++K E KGR G G R
Sbjct: 22 WIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRIEQLAKGRRRGEGSVR 81
Query: 266 GTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 445
GT AR P+K W T KID+ Y Y K F ++ L +I
Sbjct: 82 GTKYARFPRKRRWISRIRALRRELRELKTNNKIDKKTYRRYYRIIKSGSFVSRAQLRNHI 141
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 54.0 bits (124), Expect = 3e-06
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +2
Query: 182 VAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 361
V++H +R R ARRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 362 IDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 466
ID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 52.8 bits (121), Expect = 6e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +2
Query: 350 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 50.4 bits (115), Expect = 3e-05
Identities = 44/131 (33%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Frame = -2
Query: 504 RASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAF-M*SEWYRCLSIFLAVLYFRSNF 328
+A AWS S F+ L L +PF + Y +++ L RS
Sbjct: 53 QAPAWSASSFLAGLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH 112
Query: 327 LRTLCLCTHSSFCGIRALAVPLLLPKPQ*RPFLRASVFLRTRARECTATGFLMTRPSLI- 151
R L L +F GI+ALAVP L P PF R+ VF R RARE T + L ++
Sbjct: 113 -RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWTDSHRLPDDQAIFD 171
Query: 150 XLRMFXTGVGV 118
L TGVG+
Sbjct: 172 QLPDLLTGVGI 182
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 50.0 bits (114), Expect = 4e-05
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +2
Query: 140 IRKXIKDG-LVIKKPVAVHSRARVRKNTEARR-KGRHCGFGKRRGTANARMPQKELWXXX 313
IR IKDG +++ K V + S R+++ + R K G R+G AR K++W
Sbjct: 41 IRNLIKDGKIIVLKKVGI-SGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKR 99
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 418
K IDRH Y LY+K KG +K
Sbjct: 100 VRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 49.6 bits (113), Expect = 5e-05
Identities = 31/110 (28%), Positives = 47/110 (42%)
Frame = +2
Query: 137 NIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXX 316
++R I GL+ +P SR R R ++KGR G G R+G R ++E W
Sbjct: 37 DVRALIDQGLIWAEPERGVSRGRWRVRHIKKKKGRRRGHGSRKG---PRTDEEEAWKEKV 93
Query: 317 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEK 466
K++ ++ LY KGN F++ L YI+ K K
Sbjct: 94 RAMRRFLNTLKRKGKLEPRVWRQLYRMVKGNYFRDLDHLKTYINEHKLAK 143
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +3
Query: 390 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRN 569
T +RR MCS+T SW+TST PA ++ R+HASAA++ PR+R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRK 60
Query: 570 CCRPS 584
R S
Sbjct: 61 SSRLS 65
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 40.3 bits (90), Expect = 0.034
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Frame = +2
Query: 134 QNIRKXI----KDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKEL 301
+N RK I K ++IKK + S R + ++ G G G+R+GT NAR K L
Sbjct: 34 ENNRKKIIDLFKKRIIIKKTIKGVSSYRKKLRKAKKQSGLKRGIGRRKGTKNARKKYKIL 93
Query: 302 WXXXXXXXXXXXXXXXTAKKIDRH--LYHSLYM--KAKGNVFKNKRVLMEYI 445
W K+ + L + ++ K KGN F + + L+E++
Sbjct: 94 WIHKIRNQRKLLKMFRNKKQFLNYKILLNKVFFFSKIKGNFFSSTKHLLEHM 145
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 39.1 bits (87), Expect = 0.078
Identities = 28/111 (25%), Positives = 47/111 (42%)
Frame = +2
Query: 137 NIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXX 316
+IR I + KPV+ SR R + + K R G ++G AR+ +K+++
Sbjct: 41 DIRSLITANTIKIKPVSGTSRGRAQHKRRQKAK-RGSKAGSKQGRMGARVGKKQVYVKKV 99
Query: 317 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKA 469
K I + +LY K GN +NK L + KA+++
Sbjct: 100 RALRYLLAVFKDRKDITNPEFWALYKKVGGNTVRNKAHLHLLVDEIKAKRS 150
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 37.9 bits (84), Expect = 0.18
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +2
Query: 134 QNIRKXIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 313
+NIR I + SR R + +A+R R G ++G AR+ +KE++
Sbjct: 40 ENIRSLITANTIKIDSFTGTSRGRAQTK-KAQRNKRGTKQGSKQGRKGARVGKKEIYVAK 98
Query: 314 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNK---RVLMEYIHRKK 457
K++ + +LY K GN +NK R LME I K+
Sbjct: 99 VRSLRRLLKIAKDRKELTNPEFWALYKKVGGNTVRNKAHLRQLMEEIVAKR 149
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 33.9 bits (74), Expect = 2.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 43 RLAASVXXCGXXQVWLDPNXINELANTN 126
+ A + CG +VW+DPN +NE++ N
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVN 46
Score = 33.1 bits (72), Expect = 5.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +2
Query: 53 PLXCXVVKXRCG----WIQMXSMSSQTPTPV-QNIRKXIKDGLVIKKPVAVHSRARVRK 214
PL + +CG WI ++ + QNI K +KD +I+KP +HS++ R+
Sbjct: 17 PLKYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Shewanella loihica PV-4|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 718
Score = 33.5 bits (73), Expect = 3.9
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -1
Query: 565 LLLGGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHI 407
L LG +T+L A A L+ ++ GL+ A +RPGL+ LL ++ ++ H + E I
Sbjct: 553 LNLGNDTYLEATARLMDTLSRGLAGEAYLIRPGLI-LLTLNEVNAHQALQERI 604
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 5.1
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 392 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 493
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 33.1 bits (72), Expect = 5.1
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 19 LRSLKLHHRLAASVXXCGXXQVWLDPNXINELANTNSSXE-HP*XDQGWSRHQETCSSTL 195
+ LK R+AA V G ++W DP+ E+A + + DQG R ++ S++
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 196 PRS 204
R+
Sbjct: 61 GRA 63
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 511 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 392
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,889,612
Number of Sequences: 1657284
Number of extensions: 9729996
Number of successful extensions: 25805
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 25053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25775
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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